RNA–Protein interactions for RNA: ENST00000569624.5

CDH11-217, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 584 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-217ENST00000569624 NGEFQ8N5V2 710 aa17.09■□□□□ 0.33
CDH11-217ENST00000569624 NLRP3Q96P20 1036 aa17.09■□□□□ 0.33
CDH11-217ENST00000569624 ABCC4O15439 1325 aa17.09■□□□□ 0.33
CDH11-217ENST00000569624 LAMB2P55268 1798 aa17.09■□□□□ 0.33
CDH11-217ENST00000569624 ANKRD36CQ5JPF3 1778 aa17.09■□□□□ 0.33
CDH11-217ENST00000569624 SHTN1A0MZ66 631 aa17.08■□□□□ 0.32
CDH11-217ENST00000569624 HTATSF1O43719 755 aaKnown RBP17.08■□□□□ 0.32
CDH11-217ENST00000569624 PPP1R42Q7Z4L9 355 aa17.08■□□□□ 0.32
CDH11-217ENST00000569624 MICALL2Q8IY33 904 aa17.08■□□□□ 0.32
CDH11-217ENST00000569624 C2orf69Q8N8R5 385 aa17.08■□□□□ 0.32
CDH11-217ENST00000569624 ZBTB3Q9H5J0 574 aa17.08■□□□□ 0.32
CDH11-217ENST00000569624 DUOX1Q9NRD9 1551 aa17.07■□□□□ 0.32
CDH11-217ENST00000569624 BBOX1O75936 387 aa17.07■□□□□ 0.32
CDH11-217ENST00000569624 ZNF157P51786 506 aaPredicted RBP17.07■□□□□ 0.32
CDH11-217ENST00000569624 TAF7Q15545 349 aaPredicted RBP17.07■□□□□ 0.32
CDH11-217ENST00000569624 PARP10Q53GL7 1025 aa17.07■□□□□ 0.32
CDH11-217ENST00000569624 DLK2Q6UY11 383 aa17.07■□□□□ 0.32
CDH11-217ENST00000569624 GIGYF2Q6Y7W6 1299 aaKnown RBP17.07■□□□□ 0.32
CDH11-217ENST00000569624 KRT26Q7Z3Y9 468 aa17.07■□□□□ 0.32
CDH11-217ENST00000569624 SP8Q8IXZ3 490 aa17.07■□□□□ 0.32
CDH11-217ENST00000569624 MPNDQ8N594 471 aa17.07■□□□□ 0.32
CDH11-217ENST00000569624 DPF2Q92785 391 aa17.07■□□□□ 0.32
CDH11-217ENST00000569624 YDJCA8MPS7 323 aa17.06■□□□□ 0.32
CDH11-217ENST00000569624 SLC10A3P09131 477 aa17.06■□□□□ 0.32
CDH11-217ENST00000569624 DCTN1Q14203 1278 aa17.06■□□□□ 0.32
CDH11-217ENST00000569624 SLC10A5Q5PT55 438 aa17.06■□□□□ 0.32
CDH11-217ENST00000569624 HPS5Q9UPZ3 1129 aa17.06■□□□□ 0.32
CDH11-217ENST00000569624 LRRC37AA6NMS7 1700 aa17.06■□□□□ 0.32
CDH11-217ENST00000569624 REM2Q8IYK8 340 aaPredicted RBP17.05■□□□□ 0.32
CDH11-217ENST00000569624 GCC1Q96CN9 775 aa17.05■□□□□ 0.32
CDH11-217ENST00000569624 CSRNP1Q96S65 589 aa17.05■□□□□ 0.32
CDH11-217ENST00000569624 RRP7AQ9Y3A4 280 aaKnown RBP17.05■□□□□ 0.32
CDH11-217ENST00000569624 HTTP42858 3142 aa17.05■□□□□ 0.32
CDH11-217ENST00000569624 PKN2Q16513 984 aaKnown RBP17.04■□□□□ 0.32
CDH11-217ENST00000569624 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
CDH11-217ENST00000569624 ADM5C9JUS6 153 aa17.03■□□□□ 0.32
CDH11-217ENST00000569624 MYL6BP14649 208 aa17.03■□□□□ 0.32
CDH11-217ENST00000569624 CFAP53Q96M91 514 aa17.03■□□□□ 0.32
CDH11-217ENST00000569624 MIS18AQ9NYP9 233 aa17.03■□□□□ 0.32
CDH11-217ENST00000569624 ERBB4Q15303 1308 aa17.02■□□□□ 0.32
CDH11-217ENST00000569624 DDX60Q8IY21 1712 aaKnown RBP17.02■□□□□ 0.32
CDH11-217ENST00000569624 EGFRP00533 1210 aa17.02■□□□□ 0.32
CDH11-217ENST00000569624 TBC1D10BQ4KMP7 808 aaPredicted RBP17.02■□□□□ 0.32
CDH11-217ENST00000569624 PNISRQ8TF01 805 aaKnown RBP17.02■□□□□ 0.32
CDH11-217ENST00000569624 DCPSQ96C86 337 aaKnown RBP17.02■□□□□ 0.32
CDH11-217ENST00000569624 UTP14AQ9BVJ6 771 aaKnown RBP17.02■□□□□ 0.32
CDH11-217ENST00000569624 NUDCQ9Y266 331 aa17.02■□□□□ 0.32
CDH11-217ENST00000569624 ZBTB12Q9Y330 459 aaPredicted RBP17.02■□□□□ 0.32
CDH11-217ENST00000569624 PSMD14O00487 310 aa17.01■□□□□ 0.31
CDH11-217ENST00000569624 RPS12P25398 132 aaKnown RBP17.01■□□□□ 0.31
CDH11-217ENST00000569624 DLG5Q8TDM6 1919 aa17.01■□□□□ 0.31
CDH11-217ENST00000569624 CENPFP49454 3210 aa17.01■□□□□ 0.31
CDH11-217ENST00000569624 TAF1P21675 1872 aa17.01■□□□□ 0.31
CDH11-217ENST00000569624 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
CDH11-217ENST00000569624 EIF4A1P60842 406 aaKnown RBP17■□□□□ 0.31
CDH11-217ENST00000569624 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
CDH11-217ENST00000569624 GRAPQ13588 217 aa17■□□□□ 0.31
CDH11-217ENST00000569624 TMC4Q7Z404 712 aa17■□□□□ 0.31
CDH11-217ENST00000569624 GRAPLQ8TC17 118 aaPredicted RBP17■□□□□ 0.31
CDH11-217ENST00000569624 DDX46Q7L014 1031 aaKnown RBP16.99■□□□□ 0.31
CDH11-217ENST00000569624 RASAL3Q86YV0 1011 aa16.99■□□□□ 0.31
CDH11-217ENST00000569624 PAPPA2Q9BXP8 1791 aa16.99■□□□□ 0.31
CDH11-217ENST00000569624 BRCA2P51587 3418 aa16.99■□□□□ 0.31
CDH11-217ENST00000569624 SULF1Q8IWU6 871 aa16.98■□□□□ 0.31
CDH11-217ENST00000569624 CNGB1Q14028 1251 aaPredicted RBP16.97■□□□□ 0.31
CDH11-217ENST00000569624 WASHC4Q2M389 1173 aa16.97■□□□□ 0.31
CDH11-217ENST00000569624 LRP10Q7Z4F1 713 aa16.97■□□□□ 0.31
CDH11-217ENST00000569624 CDCA5Q96FF9 252 aa16.97■□□□□ 0.31
CDH11-217ENST00000569624 GGA3Q9NZ52 723 aa16.97■□□□□ 0.31
CDH11-217ENST00000569624 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
CDH11-217ENST00000569624 HCLS1P14317 486 aaPredicted RBP16.96■□□□□ 0.31
CDH11-217ENST00000569624 FKBP1BP68106 108 aa16.96■□□□□ 0.31
CDH11-217ENST00000569624 KIF4BQ2VIQ3 1234 aa16.96■□□□□ 0.31
CDH11-217ENST00000569624 NOM1Q5C9Z4 860 aaKnown RBP16.96■□□□□ 0.31
CDH11-217ENST00000569624 HABP4Q5JVS0 413 aaKnown RBP16.96■□□□□ 0.31
CDH11-217ENST00000569624 ZNF296Q8WUU4 475 aaPredicted RBP16.96■□□□□ 0.31
CDH11-217ENST00000569624 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
CDH11-217ENST00000569624 RTL9Q8NET4 1388 aa16.96■□□□□ 0.31
CDH11-217ENST00000569624 SCN9AQ15858 1988 aa16.96■□□□□ 0.31
CDH11-217ENST00000569624 TRIM26Q12899 539 aaPredicted RBP16.95■□□□□ 0.3
CDH11-217ENST00000569624 RBM26Q5T8P6 1007 aaKnown RBP16.95■□□□□ 0.3
CDH11-217ENST00000569624 FBXO46Q6PJ61 603 aaPredicted RBP16.95■□□□□ 0.3
CDH11-217ENST00000569624 ECE2O60344 883 aa16.94■□□□□ 0.3
CDH11-217ENST00000569624 HSP90AB3PQ58FF7 597 aa16.94■□□□□ 0.3
CDH11-217ENST00000569624 NLRP10Q86W26 655 aa16.94■□□□□ 0.3
CDH11-217ENST00000569624 ZNF609O15014 1411 aa16.94■□□□□ 0.3
CDH11-217ENST00000569624 SH3TC1Q8TE82 1336 aa16.94■□□□□ 0.3
CDH11-217ENST00000569624 PDIA6Q15084 440 aa16.93■□□□□ 0.3
CDH11-217ENST00000569624 SZT2Q5T011 3432 aa16.92■□□□□ 0.3
CDH11-217ENST00000569624 KIAA0100Q14667 2235 aaKnown RBP16.92■□□□□ 0.3
CDH11-217ENST00000569624 THUMPD2Q9BTF0 503 aaKnown RBP16.92■□□□□ 0.3
CDH11-217ENST00000569624 KCNQ5Q9NR82 932 aa16.92■□□□□ 0.3
CDH11-217ENST00000569624 TRMT112Q9UI30 125 aaKnown RBP16.92■□□□□ 0.3
CDH11-217ENST00000569624 NSFL1CQ9UNZ2 370 aaKnown RBP16.92■□□□□ 0.3
CDH11-217ENST00000569624 CEP290O15078 2479 aa16.92■□□□□ 0.3
CDH11-217ENST00000569624 ASTN2O75129 1339 aaPredicted RBP16.92■□□□□ 0.3
CDH11-217ENST00000569624 PSME4Q14997 1843 aa16.91■□□□□ 0.3
CDH11-217ENST00000569624 GPR25O00155 361 aa16.91■□□□□ 0.3
CDH11-217ENST00000569624 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
CDH11-217ENST00000569624 TBC1D8O95759 1140 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms