RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 USP48Q86UV5 1035 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 CCDC191Q8NCU4 936 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 KCPQ6ZWJ8 1503 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 TAF5LO75529 589 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 FOXD4L6Q3SYB3 417 aaPredicted RBP11.55□□□□□ -0.56
TCF4-240ENST00000568673 FOXD4L3Q6VB84 417 aaPredicted RBP11.55□□□□□ -0.56
TCF4-240ENST00000568673 ZNF589Q86UQ0 364 aaPredicted RBP11.55□□□□□ -0.56
TCF4-240ENST00000568673 CCDC83Q8IWF9 413 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 TMEM87AQ8NBN3 555 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 EDC3Q96F86 508 aaKnown RBP11.55□□□□□ -0.56
TCF4-240ENST00000568673 HAUS7Q99871 368 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 DBNDD2Q9BQY9 259 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 RBSNQ9H1K0 784 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 ALDH8A1Q9H2A2 487 aaPredicted RBP11.55□□□□□ -0.56
TCF4-240ENST00000568673 DNAJC5Q9H3Z4 198 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 HMG20BQ9P0W2 317 aa11.55□□□□□ -0.56
TCF4-240ENST00000568673 RFX7Q2KHR2 1363 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 SYCE3A1L190 88 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 GJB2P29033 226 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 CLCN1P35523 988 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 EVA1CP58658 441 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 ME3Q16798 604 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 USPL1Q5W0Q7 1092 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 GPR108Q9NPR9 543 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 ATP6V1DQ9Y5K8 247 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 ANKRD1Q15327 319 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 BLOC1S2Q6QNY1 142 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 ATG9AQ7Z3C6 839 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 SYAP1Q96A49 352 aaPredicted RBP11.54□□□□□ -0.56
TCF4-240ENST00000568673 STRN4Q9NRL3 753 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 CHMP3Q9Y3E7 222 aa11.54□□□□□ -0.56
TCF4-240ENST00000568673 ESPNB1AK53 854 aa11.53□□□□□ -0.56
TCF4-240ENST00000568673 GADD45BO75293 160 aaPredicted RBP11.53□□□□□ -0.56
TCF4-240ENST00000568673 F13A1P00488 732 aa11.53□□□□□ -0.56
TCF4-240ENST00000568673 PDIA4P13667 645 aaKnown RBP11.53□□□□□ -0.56
TCF4-240ENST00000568673 IL15P40933 162 aaPredicted RBP11.53□□□□□ -0.56
TCF4-240ENST00000568673 GDPD2Q9HCC8 539 aa11.53□□□□□ -0.56
TCF4-240ENST00000568673 ATG3Q9NT62 314 aa11.53□□□□□ -0.56
TCF4-240ENST00000568673 TPCN1Q9ULQ1 816 aa11.53□□□□□ -0.56
TCF4-240ENST00000568673 TNS2Q63HR2 1409 aa11.53□□□□□ -0.56
TCF4-240ENST00000568673 TCHHQ07283 1943 aa11.53□□□□□ -0.56
TCF4-240ENST00000568673 RPS6KB1P23443 525 aa11.53□□□□□ -0.56
TCF4-240ENST00000568673 ST3GAL1Q11201 340 aa11.53□□□□□ -0.56
TCF4-240ENST00000568673 DNAJC2Q99543 621 aaKnown RBP11.53□□□□□ -0.56
TCF4-240ENST00000568673 ZBTB3Q9H5J0 574 aa11.53□□□□□ -0.56
TCF4-240ENST00000568673 PAPPAQ13219 1627 aa11.52□□□□□ -0.56
TCF4-240ENST00000568673 KRT32Q14532 448 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 MCMDC2Q4G0Z9 681 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 TICAM2Q86XR7 235 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 NDUFB9Q9Y6M9 179 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 ZNF335Q9H4Z2 1342 aaPredicted RBP11.52□□□□□ -0.57
TCF4-240ENST00000568673 NUP188Q5SRE5 1749 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 COL9A3Q14050 684 aaPredicted RBP11.52□□□□□ -0.57
TCF4-240ENST00000568673 KLHL34Q8N239 644 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 NECAB1Q8N987 351 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 KBTBD3Q8NAB2 608 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 PODXL2Q9NZ53 605 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 MTMR6Q9Y217 621 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 CNPY2Q9Y2B0 182 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 TAF6LQ9Y6J9 622 aa11.52□□□□□ -0.57
TCF4-240ENST00000568673 STRCQ7RTU9 1775 aa11.51□□□□□ -0.57
TCF4-240ENST00000568673 EYA2O00167 538 aa11.51□□□□□ -0.57
TCF4-240ENST00000568673 PHF14O94880 888 aa11.51□□□□□ -0.57
TCF4-240ENST00000568673 NEUROD6Q96NK8 337 aa11.51□□□□□ -0.57
TCF4-240ENST00000568673 ISCA1Q9BUE6 129 aa11.51□□□□□ -0.57
TCF4-240ENST00000568673 TEX13AQ9BXU3 409 aaPredicted RBP11.51□□□□□ -0.57
TCF4-240ENST00000568673 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
TCF4-240ENST00000568673 SHANK3Q9BYB0 1731 aa11.51□□□□□ -0.57
TCF4-240ENST00000568673 CIAO1O76071 339 aa11.5□□□□□ -0.57
TCF4-240ENST00000568673 TIMM10P62072 90 aa11.5□□□□□ -0.57
TCF4-240ENST00000568673 DDX46Q7L014 1031 aaKnown RBP11.5□□□□□ -0.57
TCF4-240ENST00000568673 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
TCF4-240ENST00000568673 ZNF609O15014 1411 aa11.5□□□□□ -0.57
TCF4-240ENST00000568673 UBE2HP62256 183 aa11.5□□□□□ -0.57
TCF4-240ENST00000568673 TRIM28Q13263 835 aaKnown RBP11.5□□□□□ -0.57
TCF4-240ENST00000568673 TCIRG1Q13488 830 aa11.5□□□□□ -0.57
TCF4-240ENST00000568673 TOB2Q14106 344 aaPredicted RBP11.5□□□□□ -0.57
TCF4-240ENST00000568673 VSIG10Q8N0Z9 540 aa11.5□□□□□ -0.57
TCF4-240ENST00000568673 PDLIM2Q96JY6 352 aa11.5□□□□□ -0.57
TCF4-240ENST00000568673 TJP1Q07157 1748 aa11.5□□□□□ -0.57
TCF4-240ENST00000568673 ABCA3Q99758 1704 aa11.5□□□□□ -0.57
TCF4-240ENST00000568673 SH3TC1Q8TE82 1336 aa11.49□□□□□ -0.57
TCF4-240ENST00000568673 PDCP20941 246 aa11.49□□□□□ -0.57
TCF4-240ENST00000568673 LRRC24Q50LG9 513 aa11.49□□□□□ -0.57
TCF4-240ENST00000568673 LARP1BQ659C4 914 aaKnown RBP11.49□□□□□ -0.57
TCF4-240ENST00000568673 NEK1Q96PY6 1258 aa11.49□□□□□ -0.57
TCF4-240ENST00000568673 SEC62Q99442 399 aaKnown RBP11.49□□□□□ -0.57
TCF4-240ENST00000568673 PAG1Q9NWQ8 432 aa11.49□□□□□ -0.57
TCF4-240ENST00000568673 PALLDQ8WX93 1383 aa11.49□□□□□ -0.57
TCF4-240ENST00000568673 CHGBP05060 677 aa11.49□□□□□ -0.57
TCF4-240ENST00000568673 CSPP1Q1MSJ5 1256 aa11.49□□□□□ -0.57
TCF4-240ENST00000568673 ZNF594Q96JF6 807 aaPredicted RBP11.49□□□□□ -0.57
TCF4-240ENST00000568673 TCEANC2Q96MN5 208 aa11.49□□□□□ -0.57
TCF4-240ENST00000568673 HELLSQ9NRZ9 838 aa11.49□□□□□ -0.57
TCF4-240ENST00000568673 GOLIM4O00461 696 aa11.48□□□□□ -0.57
TCF4-240ENST00000568673 CYP21A2P08686 494 aa11.48□□□□□ -0.57
TCF4-240ENST00000568673 HS1BP3Q53T59 392 aa11.48□□□□□ -0.57
TCF4-240ENST00000568673 CCDC129Q6ZRS4 1044 aa11.48□□□□□ -0.57
TCF4-240ENST00000568673 TSPY26PQ9H489 355 aa11.48□□□□□ -0.57
TCF4-240ENST00000568673 FBXO3Q9UK99 471 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms