RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 DDX19AQ9NUU7 478 aaKnown RBP9.08□□□□□ -0.96
ATXN3-250ENST00000568290 CHPF2Q9P2E5 772 aa9.08□□□□□ -0.96
ATXN3-250ENST00000568290 CFAP45Q9UL16 551 aa9.08□□□□□ -0.96
ATXN3-250ENST00000568290 ABCC6O95255 1503 aa9.08□□□□□ -0.96
ATXN3-250ENST00000568290 FER1L4A9Z1Z3 1794 aa9.08□□□□□ -0.96
ATXN3-250ENST00000568290 COL15A1P39059 1388 aa9.08□□□□□ -0.96
ATXN3-250ENST00000568290 CTAGE5O15320 804 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 GIGYF1O75420 1035 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-250ENST00000568290 TATP17735 454 aaPredicted RBP9.07□□□□□ -0.96
ATXN3-250ENST00000568290 TSGA10IPQ3SY00 556 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 ESCO1Q5FWF5 840 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 SASS6Q6UVJ0 657 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 CWC27Q6UX04 472 aaKnown RBP9.07□□□□□ -0.96
ATXN3-250ENST00000568290 RIC3Q7Z5B4 369 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 USP48Q86UV5 1035 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 AACSQ86V21 672 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 NUTM1Q86Y26 1132 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 TTC5Q8N0Z6 440 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 UBE2Q2Q8WVN8 375 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 NECTIN2Q92692 538 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 TTC14Q96N46 770 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 RBSNQ9H1K0 784 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 SNRKQ9NRH2 765 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 TMEM63CQ9P1W3 806 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 MAP3K2Q9Y2U5 619 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 ZDHHC9Q9Y397 364 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 LMO7Q8WWI1 1683 aa9.07□□□□□ -0.96
ATXN3-250ENST00000568290 NRDCO43847 1150 aa9.06□□□□□ -0.96
ATXN3-250ENST00000568290 GCP02774 474 aa9.06□□□□□ -0.96
ATXN3-250ENST00000568290 AK2P54819 239 aa9.06□□□□□ -0.96
ATXN3-250ENST00000568290 DNTTIP2Q5QJE6 756 aaKnown RBP9.06□□□□□ -0.96
ATXN3-250ENST00000568290 LARP1BQ659C4 914 aaKnown RBP9.06□□□□□ -0.96
ATXN3-250ENST00000568290 ARHGEF25Q86VW2 580 aa9.06□□□□□ -0.96
ATXN3-250ENST00000568290 RGS22Q8NE09 1264 aa9.06□□□□□ -0.96
ATXN3-250ENST00000568290 JAKMIP1Q96N16 626 aaKnown RBP9.06□□□□□ -0.96
ATXN3-250ENST00000568290 LLPHQ9BRT6 129 aaKnown RBP9.06□□□□□ -0.96
ATXN3-250ENST00000568290 UPF3BQ9BZI7 483 aaKnown RBP9.06□□□□□ -0.96
ATXN3-250ENST00000568290 PHAXQ9H814 394 aaKnown RBP9.06□□□□□ -0.96
ATXN3-250ENST00000568290 NWD1Q149M9 1564 aa9.06□□□□□ -0.96
ATXN3-250ENST00000568290 MST1RQ04912 1400 aa9.05□□□□□ -0.96
ATXN3-250ENST00000568290 HEG1Q9ULI3 1381 aa9.05□□□□□ -0.96
ATXN3-250ENST00000568290 KDM4FA0A1W2PPD8 638 aa9.05□□□□□ -0.96
ATXN3-250ENST00000568290 SYT1P21579 422 aa9.05□□□□□ -0.96
ATXN3-250ENST00000568290 NBPF6Q5VWK0 638 aa9.05□□□□□ -0.96
ATXN3-250ENST00000568290 ARHGEF1Q92888 912 aaKnown RBP9.05□□□□□ -0.96
ATXN3-250ENST00000568290 MAP4K1Q92918 833 aa9.05□□□□□ -0.96
ATXN3-250ENST00000568290 NBPF4Q96M43 638 aa9.05□□□□□ -0.96
ATXN3-250ENST00000568290 FSD1Q9BTV5 496 aa9.05□□□□□ -0.96
ATXN3-250ENST00000568290 NFAT5O94916 1531 aa9.05□□□□□ -0.96
ATXN3-250ENST00000568290 NPHP3Q7Z494 1330 aa9.05□□□□□ -0.96
ATXN3-250ENST00000568290 KDM3BQ7LBC6 1761 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 KIF1AQ12756 1690 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 NEMFO60524 1076 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 NBPF7P0C2Y1 421 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-250ENST00000568290 GJB2P29033 226 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 CEBPAP49715 358 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-250ENST00000568290 FGD1P98174 961 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 MAP3K11Q16584 847 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.04□□□□□ -0.96
ATXN3-250ENST00000568290 IFNL2Q8IZJ0 200 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 ANKRD24Q8TF21 1146 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 GPR108Q9NPR9 543 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 PALD1Q9ULE6 856 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 SLIT3O75094 1523 aa9.04□□□□□ -0.96
ATXN3-250ENST00000568290 ADCY9O60503 1353 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 RPAP1Q9BWH6 1393 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-250ENST00000568290 DHX16O60231 1041 aaKnown RBP9.03□□□□□ -0.96
ATXN3-250ENST00000568290 KDM4AO75164 1064 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 SNRPA1P09661 255 aaKnown RBP9.03□□□□□ -0.96
ATXN3-250ENST00000568290 ATP5JP18859 108 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 PKP1Q13835 747 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 NECTIN1Q15223 517 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 CREB3L3Q68CJ9 461 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 PRPF40BQ6NWY9 871 aaKnown RBP9.03□□□□□ -0.96
ATXN3-250ENST00000568290 DCAF5Q96JK2 942 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 ZNF396Q96N95 335 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-250ENST00000568290 FMNL2Q96PY5 1086 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 METTL22Q9BUU2 404 aaPredicted RBP9.03□□□□□ -0.96
ATXN3-250ENST00000568290 NUP62CLQ9H1M0 184 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 COPRSQ9NQ92 184 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 CTNNA3Q9UI47 895 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 RBM8AQ9Y5S9 174 aaKnown RBP9.03□□□□□ -0.96
ATXN3-250ENST00000568290 AK9Q5TCS8 1911 aa9.03□□□□□ -0.96
ATXN3-250ENST00000568290 VPS37CA5D8V6 355 aaPredicted RBP9.02□□□□□ -0.97
ATXN3-250ENST00000568290 H3BQV1 296 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 RPS6KB1P23443 525 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 TPM4P67936 248 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 ZRSR1Q15695 479 aaKnown RBP9.02□□□□□ -0.97
ATXN3-250ENST00000568290 IFFO2Q5TF58 517 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 NUTM2GQ5VZR2 741 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 ANKRD13DQ6ZTN6 518 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 NOL8Q76FK4 1167 aaKnown RBP9.02□□□□□ -0.97
ATXN3-250ENST00000568290 FAM200AQ8TCP9 573 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 PIBF1Q8WXW3 757 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 SLC52A2Q9HAB3 445 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 HELLSQ9NRZ9 838 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 ATG3Q9NT62 314 aa9.02□□□□□ -0.97
ATXN3-250ENST00000568290 RBM27Q9P2N5 1060 aaKnown RBP9.02□□□□□ -0.97
ATXN3-250ENST00000568290 CHD2O14647 1828 aaKnown RBP9.02□□□□□ -0.97
ATXN3-250ENST00000568290 LTN1O94822 1766 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms