RNA–Protein interactions for RNA: ENST00000568078.5

SNUPN-209, Transcript of snurportin 1, humanhuman

TSL 2

Gene SNUPN, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-209ENST00000568078 C5P01031 1676 aa12.29□□□□□ -0.44
SNUPN-209ENST00000568078 NUP188Q5SRE5 1749 aa12.29□□□□□ -0.44
SNUPN-209ENST00000568078 RGPD3A6NKT7 1758 aaPredicted RBP12.29□□□□□ -0.44
SNUPN-209ENST00000568078 RGPD4Q7Z3J3 1758 aa12.29□□□□□ -0.44
SNUPN-209ENST00000568078 E9PSI1 815 aa12.29□□□□□ -0.44
SNUPN-209ENST00000568078 A1BGP04217 495 aa12.29□□□□□ -0.44
SNUPN-209ENST00000568078 MDM2Q00987 491 aaPredicted RBP12.29□□□□□ -0.44
SNUPN-209ENST00000568078 SLC15A2Q16348 729 aa12.29□□□□□ -0.44
SNUPN-209ENST00000568078 DUSP27Q5VZP5 1158 aa12.29□□□□□ -0.44
SNUPN-209ENST00000568078 TMEM134Q9H6X4 195 aa12.29□□□□□ -0.44
SNUPN-209ENST00000568078 FANCIQ9NVI1 1328 aa12.29□□□□□ -0.44
SNUPN-209ENST00000568078 RREB1Q92766 1687 aa12.29□□□□□ -0.44
SNUPN-209ENST00000568078 KDM3BQ7LBC6 1761 aa12.28□□□□□ -0.44
SNUPN-209ENST00000568078 TCERG1O14776 1098 aaKnown RBP12.28□□□□□ -0.44
SNUPN-209ENST00000568078 GIGYF1O75420 1035 aaPredicted RBP12.28□□□□□ -0.44
SNUPN-209ENST00000568078 ZNF853P0CG23 659 aa12.28□□□□□ -0.44
SNUPN-209ENST00000568078 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
SNUPN-209ENST00000568078 MYL6BP14649 208 aa12.28□□□□□ -0.44
SNUPN-209ENST00000568078 EXOSC9Q06265 439 aaKnown RBP12.28□□□□□ -0.44
SNUPN-209ENST00000568078 HDGFL1Q5TGJ6 251 aa12.28□□□□□ -0.44
SNUPN-209ENST00000568078 GPCPD1Q9NPB8 672 aa12.28□□□□□ -0.44
SNUPN-209ENST00000568078 USP16Q9Y5T5 823 aa12.28□□□□□ -0.44
SNUPN-209ENST00000568078 SLC4A3P48751 1232 aa12.27□□□□□ -0.45
SNUPN-209ENST00000568078 C8orf58Q8NAV2 365 aa12.27□□□□□ -0.45
SNUPN-209ENST00000568078 NLRP7Q8WX94 980 aa12.27□□□□□ -0.45
SNUPN-209ENST00000568078 ZFRQ96KR1 1074 aaKnown RBP12.27□□□□□ -0.45
SNUPN-209ENST00000568078 ZBTB1Q9Y2K1 713 aa12.27□□□□□ -0.45
SNUPN-209ENST00000568078 C4BP0C0L5 1744 aa12.27□□□□□ -0.45
SNUPN-209ENST00000568078 UBR2Q8IWV8 1755 aa12.27□□□□□ -0.45
SNUPN-209ENST00000568078 TJP1Q07157 1748 aa12.26□□□□□ -0.45
SNUPN-209ENST00000568078 RFC4P35249 363 aa12.26□□□□□ -0.45
SNUPN-209ENST00000568078 TWISTNBQ3B726 338 aaPredicted RBP12.26□□□□□ -0.45
SNUPN-209ENST00000568078 TRAPPC3LQ5T215 181 aa12.26□□□□□ -0.45
SNUPN-209ENST00000568078 CNTNAP4Q9C0A0 1308 aa12.26□□□□□ -0.45
SNUPN-209ENST00000568078 ZPR1O75312 459 aa12.25□□□□□ -0.45
SNUPN-209ENST00000568078 ZBTB7AO95365 584 aa12.25□□□□□ -0.45
SNUPN-209ENST00000568078 ANXA1P04083 346 aa12.25□□□□□ -0.45
SNUPN-209ENST00000568078 AIMP1Q12904 312 aaKnown RBP12.25□□□□□ -0.45
SNUPN-209ENST00000568078 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
SNUPN-209ENST00000568078 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
SNUPN-209ENST00000568078 INTS5Q6P9B9 1019 aaKnown RBP12.25□□□□□ -0.45
SNUPN-209ENST00000568078 PARP9Q8IXQ6 854 aa12.25□□□□□ -0.45
SNUPN-209ENST00000568078 TSPYL6Q8N831 410 aa12.25□□□□□ -0.45
SNUPN-209ENST00000568078 ANKK1Q8NFD2 765 aa12.25□□□□□ -0.45
SNUPN-209ENST00000568078 STK31Q9BXU1 1019 aa12.25□□□□□ -0.45
SNUPN-209ENST00000568078 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
SNUPN-209ENST00000568078 ZBED9Q6R2W3 1325 aa12.25□□□□□ -0.45
SNUPN-209ENST00000568078 TAF1LQ8IZX4 1826 aa12.25□□□□□ -0.45
SNUPN-209ENST00000568078 RPS6KA4O75676 772 aa12.24□□□□□ -0.45
SNUPN-209ENST00000568078 SLFN5Q08AF3 891 aa12.24□□□□□ -0.45
SNUPN-209ENST00000568078 FLAD1Q8NFF5 587 aa12.24□□□□□ -0.45
SNUPN-209ENST00000568078 ZNF521Q96K83 1311 aa12.24□□□□□ -0.45
SNUPN-209ENST00000568078 CHPF2Q9P2E5 772 aa12.24□□□□□ -0.45
SNUPN-209ENST00000568078 PNPLA7Q6ZV29 1317 aa12.23□□□□□ -0.45
SNUPN-209ENST00000568078 A0A087WZG4 1122 aa12.23□□□□□ -0.45
SNUPN-209ENST00000568078 SSFA2P28290 1259 aa12.23□□□□□ -0.45
SNUPN-209ENST00000568078 BRPF1P55201 1214 aaPredicted RBP12.23□□□□□ -0.45
SNUPN-209ENST00000568078 SWT1Q5T5J6 900 aaKnown RBP12.23□□□□□ -0.45
SNUPN-209ENST00000568078 CCDC30Q5VVM6 783 aa12.23□□□□□ -0.45
SNUPN-209ENST00000568078 GIGYF2Q6Y7W6 1299 aaKnown RBP12.23□□□□□ -0.45
SNUPN-209ENST00000568078 KIF6Q6ZMV9 814 aa12.23□□□□□ -0.45
SNUPN-209ENST00000568078 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
SNUPN-209ENST00000568078 COL23A1Q86Y22 540 aaPredicted RBP12.23□□□□□ -0.45
SNUPN-209ENST00000568078 TBC1D2BQ9UPU7 963 aa12.23□□□□□ -0.45
SNUPN-209ENST00000568078 COL15A1P39059 1388 aa12.22□□□□□ -0.45
SNUPN-209ENST00000568078 SOS1Q07889 1333 aaPredicted RBP12.22□□□□□ -0.45
SNUPN-209ENST00000568078 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
SNUPN-209ENST00000568078 SULF1Q8IWU6 871 aa12.22□□□□□ -0.45
SNUPN-209ENST00000568078 LRCH3Q96II8 777 aa12.22□□□□□ -0.45
SNUPN-209ENST00000568078 CHMP4AQ9BY43 222 aa12.22□□□□□ -0.45
SNUPN-209ENST00000568078 PDGFDQ9GZP0 370 aaPredicted RBP12.22□□□□□ -0.45
SNUPN-209ENST00000568078 SRP68Q9UHB9 627 aaKnown RBP12.22□□□□□ -0.45
SNUPN-209ENST00000568078 COL5A3P25940 1745 aaPredicted RBP12.22□□□□□ -0.45
SNUPN-209ENST00000568078 LAMB4A4D0S4 1761 aa12.21□□□□□ -0.45
SNUPN-209ENST00000568078 NPHP1O15259 732 aa12.21□□□□□ -0.45
SNUPN-209ENST00000568078 HOXB7P09629 217 aa12.21□□□□□ -0.45
SNUPN-209ENST00000568078 PROSER3Q2NL68 480 aa12.21□□□□□ -0.45
SNUPN-209ENST00000568078 BICDL1Q6ZP65 573 aa12.21□□□□□ -0.45
SNUPN-209ENST00000568078 DZIP3Q86Y13 1208 aaKnown RBP12.21□□□□□ -0.45
SNUPN-209ENST00000568078 SLF2Q8IX21 1173 aa12.21□□□□□ -0.45
SNUPN-209ENST00000568078 WNT2BQ93097 391 aa12.21□□□□□ -0.45
SNUPN-209ENST00000568078 TMUB1Q9BVT8 246 aa12.21□□□□□ -0.45
SNUPN-209ENST00000568078 ZNF831Q5JPB2 1677 aa12.2□□□□□ -0.46
SNUPN-209ENST00000568078 MYH14Q7Z406 1995 aaKnown RBP12.2□□□□□ -0.46
SNUPN-209ENST00000568078 IL6STP40189 918 aaPredicted RBP12.2□□□□□ -0.46
SNUPN-209ENST00000568078 USPL1Q5W0Q7 1092 aa12.2□□□□□ -0.46
SNUPN-209ENST00000568078 NBPF10Q6P3W6 841 aaKnown RBP12.2□□□□□ -0.46
SNUPN-209ENST00000568078 NBPF15Q8N660 670 aa12.2□□□□□ -0.46
SNUPN-209ENST00000568078 BCL2L13Q9BXK5 485 aa12.2□□□□□ -0.46
SNUPN-209ENST00000568078 ZBTB3Q9H5J0 574 aa12.2□□□□□ -0.46
SNUPN-209ENST00000568078 GPBP1L1Q9HC44 474 aaPredicted RBP12.2□□□□□ -0.46
SNUPN-209ENST00000568078 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.2□□□□□ -0.46
SNUPN-209ENST00000568078 DBF4Q9UBU7 674 aaPredicted RBP12.2□□□□□ -0.46
SNUPN-209ENST00000568078 TUBGCP6Q96RT7 1819 aa12.19□□□□□ -0.46
SNUPN-209ENST00000568078 RNF40O75150 1001 aa12.19□□□□□ -0.46
SNUPN-209ENST00000568078 POLD1P28340 1107 aa12.19□□□□□ -0.46
SNUPN-209ENST00000568078 XAGE3Q8WTP9 111 aa12.19□□□□□ -0.46
SNUPN-209ENST00000568078 REPIN1Q9BWE0 567 aaKnown RBP12.19□□□□□ -0.46
SNUPN-209ENST00000568078 KDM4CQ9H3R0 1056 aa12.19□□□□□ -0.46
SNUPN-209ENST00000568078 DDX21Q9NR30 783 aaKnown RBP eCLIP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms