RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 RPGRQ92834 1020 aaKnown RBP14.1□□□□□ -0.15
LINC01228-201ENST00000567966 COL4A5P29400 1685 aa14.1□□□□□ -0.15
LINC01228-201ENST00000567966 IARSP41252 1262 aaKnown RBP14.09□□□□□ -0.15
LINC01228-201ENST00000567966 TRIM28Q13263 835 aaKnown RBP14.09□□□□□ -0.15
LINC01228-201ENST00000567966 PARP10Q53GL7 1025 aa14.09□□□□□ -0.15
LINC01228-201ENST00000567966 TCIRG1Q13488 830 aa14.08□□□□□ -0.16
LINC01228-201ENST00000567966 KSR2Q6VAB6 950 aa14.08□□□□□ -0.16
LINC01228-201ENST00000567966 NLRP10Q86W26 655 aa14.08□□□□□ -0.16
LINC01228-201ENST00000567966 KLRG1Q96E93 195 aa14.08□□□□□ -0.16
LINC01228-201ENST00000567966 CRAMP1Q96RY5 1269 aa14.08□□□□□ -0.16
LINC01228-201ENST00000567966 UTP14AQ9BVJ6 771 aaKnown RBP14.08□□□□□ -0.16
LINC01228-201ENST00000567966 HCLS1P14317 486 aaPredicted RBP14.07□□□□□ -0.16
LINC01228-201ENST00000567966 FLIIQ13045 1269 aa14.07□□□□□ -0.16
LINC01228-201ENST00000567966 SLC10A5Q5PT55 438 aa14.07□□□□□ -0.16
LINC01228-201ENST00000567966 RIC3Q7Z5B4 369 aa14.07□□□□□ -0.16
LINC01228-201ENST00000567966 RBM17Q96I25 401 aaKnown RBP14.07□□□□□ -0.16
LINC01228-201ENST00000567966 NLRP3Q96P20 1036 aa14.07□□□□□ -0.16
LINC01228-201ENST00000567966 PHAXQ9H814 394 aaKnown RBP14.07□□□□□ -0.16
LINC01228-201ENST00000567966 TAF1P21675 1872 aa14.07□□□□□ -0.16
LINC01228-201ENST00000567966 SCN4AP35499 1836 aa14.06□□□□□ -0.16
LINC01228-201ENST00000567966 FZD9O00144 591 aa14.06□□□□□ -0.16
LINC01228-201ENST00000567966 PPEF1O14829 653 aaPredicted RBP14.06□□□□□ -0.16
LINC01228-201ENST00000567966 RARSP54136 660 aaKnown RBP14.06□□□□□ -0.16
LINC01228-201ENST00000567966 MRPL50Q8N5N7 158 aaKnown RBP14.06□□□□□ -0.16
LINC01228-201ENST00000567966 SSH1Q8WYL5 1049 aa14.06□□□□□ -0.16
LINC01228-201ENST00000567966 L3MBTL3Q96JM7 780 aaPredicted RBP14.06□□□□□ -0.16
LINC01228-201ENST00000567966 PSMD1Q99460 953 aa14.06□□□□□ -0.16
LINC01228-201ENST00000567966 TAF1DQ9H5J8 278 aaPredicted RBP14.06□□□□□ -0.16
LINC01228-201ENST00000567966 CHADLQ6NUI6 762 aa14.05□□□□□ -0.16
LINC01228-201ENST00000567966 JMYQ8N9B5 988 aa14.05□□□□□ -0.16
LINC01228-201ENST00000567966 ARHGAP45Q92619 1136 aa14.05□□□□□ -0.16
LINC01228-201ENST00000567966 ABCC4O15439 1325 aa14.05□□□□□ -0.16
LINC01228-201ENST00000567966 PTPRCP08575 1304 aa14.05□□□□□ -0.16
LINC01228-201ENST00000567966 DDX60Q8IY21 1712 aaKnown RBP14.04□□□□□ -0.16
LINC01228-201ENST00000567966 PI4KAP2A4QPH2 592 aa14.04□□□□□ -0.16
LINC01228-201ENST00000567966 IPO8O15397 1037 aaKnown RBP14.04□□□□□ -0.16
LINC01228-201ENST00000567966 FKBP5Q13451 457 aaPredicted RBP14.04□□□□□ -0.16
LINC01228-201ENST00000567966 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
LINC01228-201ENST00000567966 PI4KAP1Q8N8J0 262 aa14.04□□□□□ -0.16
LINC01228-201ENST00000567966 METTL22Q9BUU2 404 aaPredicted RBP14.04□□□□□ -0.16
LINC01228-201ENST00000567966 TRMT112Q9UI30 125 aaKnown RBP14.04□□□□□ -0.16
LINC01228-201ENST00000567966 RNF123Q5XPI4 1314 aa14.04□□□□□ -0.16
LINC01228-201ENST00000567966 IQCA1LA6NCM1 817 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 SPDYE2BA6NHP3 402 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 ATP5J2-PTCD1G3V325 749 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 SPDYE6P0CI01 402 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 NEXNQ0ZGT2 675 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 SPDYE2Q495Y8 402 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 G2E3Q7L622 706 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 ISCA1Q9BUE6 129 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 SMC4Q9NTJ3 1288 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 ATP6V0A2Q9Y487 856 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 LTBP1Q14766 1721 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 ADAMTSL1Q8N6G6 1762 aa14.03□□□□□ -0.16
LINC01228-201ENST00000567966 COL4A1P02462 1669 aa14.02□□□□□ -0.16
LINC01228-201ENST00000567966 SH3TC1Q8TE82 1336 aa14.02□□□□□ -0.17
LINC01228-201ENST00000567966 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.17
LINC01228-201ENST00000567966 EAPPQ56P03 285 aaPredicted RBP14.02□□□□□ -0.17
LINC01228-201ENST00000567966 IFFO2Q5TF58 517 aa14.02□□□□□ -0.17
LINC01228-201ENST00000567966 LARGE2Q8N3Y3 721 aa14.02□□□□□ -0.17
LINC01228-201ENST00000567966 CCDC191Q8NCU4 936 aa14.02□□□□□ -0.17
LINC01228-201ENST00000567966 JDP2Q8WYK2 163 aa14.02□□□□□ -0.17
LINC01228-201ENST00000567966 HACL1Q9UJ83 578 aa14.02□□□□□ -0.17
LINC01228-201ENST00000567966 MAP3K2Q9Y2U5 619 aa14.02□□□□□ -0.17
LINC01228-201ENST00000567966 GJA3Q9Y6H8 435 aa14.02□□□□□ -0.17
LINC01228-201ENST00000567966 KIF16BQ96L93 1317 aa14.01□□□□□ -0.17
LINC01228-201ENST00000567966 EPHX2P34913 555 aa14.01□□□□□ -0.17
LINC01228-201ENST00000567966 AOC3Q16853 763 aa14.01□□□□□ -0.17
LINC01228-201ENST00000567966 LDHDQ86WU2 507 aa14.01□□□□□ -0.17
LINC01228-201ENST00000567966 LINS1Q8NG48 757 aa14.01□□□□□ -0.17
LINC01228-201ENST00000567966 DNAAF4Q8WXU2 420 aa14.01□□□□□ -0.17
LINC01228-201ENST00000567966 FAM89AQ96GI7 184 aa14.01□□□□□ -0.17
LINC01228-201ENST00000567966 PPIP5K2O43314 1243 aa14□□□□□ -0.17
LINC01228-201ENST00000567966 ITGBL1O95965 494 aaPredicted RBP14□□□□□ -0.17
LINC01228-201ENST00000567966 EIF6P56537 245 aaKnown RBP14□□□□□ -0.17
LINC01228-201ENST00000567966 RTL5Q5HYW3 569 aaPredicted RBP14□□□□□ -0.17
LINC01228-201ENST00000567966 GPC2Q8N158 579 aa14□□□□□ -0.17
LINC01228-201ENST00000567966 API5Q9BZZ5 524 aaKnown RBP14□□□□□ -0.17
LINC01228-201ENST00000567966 PASKQ96RG2 1323 aa13.99□□□□□ -0.17
LINC01228-201ENST00000567966 BBOX1O75936 387 aa13.99□□□□□ -0.17
LINC01228-201ENST00000567966 GRAPQ13588 217 aa13.99□□□□□ -0.17
LINC01228-201ENST00000567966 GRIPAP1Q4V328 841 aa13.99□□□□□ -0.17
LINC01228-201ENST00000567966 DDX46Q7L014 1031 aaKnown RBP13.99□□□□□ -0.17
LINC01228-201ENST00000567966 SP8Q8IXZ3 490 aa13.99□□□□□ -0.17
LINC01228-201ENST00000567966 GRAPLQ8TC17 118 aaPredicted RBP13.99□□□□□ -0.17
LINC01228-201ENST00000567966 NOB1Q9ULX3 412 aaKnown RBP13.99□□□□□ -0.17
LINC01228-201ENST00000567966 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
LINC01228-201ENST00000567966 ALDH1L1O75891 902 aa13.98□□□□□ -0.17
LINC01228-201ENST00000567966 EPS15P42566 896 aa13.98□□□□□ -0.17
LINC01228-201ENST00000567966 SCNN1DP51172 638 aa13.98□□□□□ -0.17
LINC01228-201ENST00000567966 MAP1SQ66K74 1059 aaPredicted RBP13.98□□□□□ -0.17
LINC01228-201ENST00000567966 NIM1KQ8IY84 436 aa13.98□□□□□ -0.17
LINC01228-201ENST00000567966 MYD88Q99836 296 aa13.98□□□□□ -0.17
LINC01228-201ENST00000567966 RTFDC1Q9BY42 306 aaPredicted RBP13.98□□□□□ -0.17
LINC01228-201ENST00000567966 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
LINC01228-201ENST00000567966 CWC25Q9NXE8 425 aaPredicted RBP13.98□□□□□ -0.17
LINC01228-201ENST00000567966 MKRN1Q9UHC7 482 aaKnown RBP13.98□□□□□ -0.17
LINC01228-201ENST00000567966 RCAN3Q9UKA8 241 aa13.98□□□□□ -0.17
LINC01228-201ENST00000567966 DUOX1Q9NRD9 1551 aa13.97□□□□□ -0.17
LINC01228-201ENST00000567966 NEURL1BA8MQ27 555 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms