RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 NGEFQ8N5V2 710 aa12.1□□□□□ -0.47
CDH13-210ENST00000567445 C7orf43Q8WVR3 580 aa12.1□□□□□ -0.47
CDH13-210ENST00000567445 MAP3K15Q6ZN16 1313 aa12.09□□□□□ -0.47
CDH13-210ENST00000567445 POTECB2RU33 542 aa12.09□□□□□ -0.47
CDH13-210ENST00000567445 GTF2E1P29083 439 aaPredicted RBP12.09□□□□□ -0.47
CDH13-210ENST00000567445 HTRA3P83110 453 aa12.09□□□□□ -0.47
CDH13-210ENST00000567445 CCDC93Q567U6 631 aa12.09□□□□□ -0.47
CDH13-210ENST00000567445 KIF6Q6ZMV9 814 aa12.09□□□□□ -0.47
CDH13-210ENST00000567445 RRP7AQ9Y3A4 280 aaKnown RBP12.09□□□□□ -0.47
CDH13-210ENST00000567445 MYL6BP14649 208 aa12.08□□□□□ -0.47
CDH13-210ENST00000567445 KLRG1Q96E93 195 aa12.08□□□□□ -0.47
CDH13-210ENST00000567445 NYXQ9GZU5 481 aa12.08□□□□□ -0.47
CDH13-210ENST00000567445 NUP98P52948 1817 aa12.08□□□□□ -0.48
CDH13-210ENST00000567445 ERBB4Q15303 1308 aa12.08□□□□□ -0.48
CDH13-210ENST00000567445 ALDH1B1P30837 517 aa12.08□□□□□ -0.48
CDH13-210ENST00000567445 RIPK4P57078 832 aa12.08□□□□□ -0.48
CDH13-210ENST00000567445 TTLL7Q6ZT98 887 aa12.08□□□□□ -0.48
CDH13-210ENST00000567445 CDAN1Q8IWY9 1227 aa12.08□□□□□ -0.48
CDH13-210ENST00000567445 RTKN2Q8IZC4 609 aa12.08□□□□□ -0.48
CDH13-210ENST00000567445 TSPYL4Q9UJ04 414 aa12.08□□□□□ -0.48
CDH13-210ENST00000567445 DDNO94850 711 aaPredicted RBP12.07□□□□□ -0.48
CDH13-210ENST00000567445 FKBP4Q02790 459 aaKnown RBP eCLIP12.07□□□□□ -0.48
CDH13-210ENST00000567445 CRY2Q49AN0 593 aa12.07□□□□□ -0.48
CDH13-210ENST00000567445 JMYQ8N9B5 988 aa12.07□□□□□ -0.48
CDH13-210ENST00000567445 ZBTB3Q9H5J0 574 aa12.07□□□□□ -0.48
CDH13-210ENST00000567445 ABCC12Q96J65 1359 aa12.06□□□□□ -0.48
CDH13-210ENST00000567445 IBTKQ9P2D0 1353 aaPredicted RBP12.06□□□□□ -0.48
CDH13-210ENST00000567445 LMOD3Q0VAK6 560 aa12.06□□□□□ -0.48
CDH13-210ENST00000567445 OLFM4Q6UX06 510 aa12.06□□□□□ -0.48
CDH13-210ENST00000567445 TMEM92Q6UXU6 159 aa12.06□□□□□ -0.48
CDH13-210ENST00000567445 NUTM1Q86Y26 1132 aa12.06□□□□□ -0.48
CDH13-210ENST00000567445 MARVELD3Q96A59 401 aa12.06□□□□□ -0.48
CDH13-210ENST00000567445 BABAM1Q9NWV8 329 aa12.06□□□□□ -0.48
CDH13-210ENST00000567445 UBN2Q6ZU65 1347 aa12.05□□□□□ -0.48
CDH13-210ENST00000567445 HOXB3P14651 431 aaPredicted RBP12.05□□□□□ -0.48
CDH13-210ENST00000567445 GPTP24298 496 aa12.05□□□□□ -0.48
CDH13-210ENST00000567445 TMPOP42166 694 aaKnown RBP12.05□□□□□ -0.48
CDH13-210ENST00000567445 GIGYF2Q6Y7W6 1299 aaKnown RBP12.05□□□□□ -0.48
CDH13-210ENST00000567445 ZNF34Q8IZ26 560 aa12.05□□□□□ -0.48
CDH13-210ENST00000567445 ZNF277Q9NRM2 450 aaPredicted RBP12.05□□□□□ -0.48
CDH13-210ENST00000567445 PCNTO95613 3336 aa12.05□□□□□ -0.48
CDH13-210ENST00000567445 MYBBP1AQ9BQG0 1328 aaKnown RBP12.04□□□□□ -0.48
CDH13-210ENST00000567445 RIC1Q4ADV7 1423 aa12.04□□□□□ -0.48
CDH13-210ENST00000567445 IQCA1LA6NCM1 817 aa12.04□□□□□ -0.48
CDH13-210ENST00000567445 DDX10Q13206 875 aaKnown RBP12.04□□□□□ -0.48
CDH13-210ENST00000567445 SUSD4Q5VX71 490 aa12.04□□□□□ -0.48
CDH13-210ENST00000567445 RPGRQ92834 1020 aaKnown RBP12.04□□□□□ -0.48
CDH13-210ENST00000567445 EIF2S2P20042 333 aaKnown RBP12.03□□□□□ -0.48
CDH13-210ENST00000567445 HOXA10P31260 410 aaPredicted RBP12.03□□□□□ -0.48
CDH13-210ENST00000567445 PDIA6Q15084 440 aa12.03□□□□□ -0.48
CDH13-210ENST00000567445 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
CDH13-210ENST00000567445 CC2D2BQ6DHV5 1058 aa12.03□□□□□ -0.48
CDH13-210ENST00000567445 LRP10Q7Z4F1 713 aa12.03□□□□□ -0.48
CDH13-210ENST00000567445 PSMD1Q99460 953 aa12.03□□□□□ -0.48
CDH13-210ENST00000567445 ZNF541Q9H0D2 1346 aa12.03□□□□□ -0.48
CDH13-210ENST00000567445 NTSR2O95665 410 aa12.02□□□□□ -0.48
CDH13-210ENST00000567445 IARSP41252 1262 aaKnown RBP12.02□□□□□ -0.48
CDH13-210ENST00000567445 PARP10Q53GL7 1025 aa12.02□□□□□ -0.48
CDH13-210ENST00000567445 PPP1R42Q7Z4L9 355 aa12.02□□□□□ -0.48
CDH13-210ENST00000567445 SYNE4Q8N205 404 aa12.02□□□□□ -0.48
CDH13-210ENST00000567445 SNED1Q8TER0 1413 aa12.02□□□□□ -0.49
CDH13-210ENST00000567445 SCN4AP35499 1836 aa12.02□□□□□ -0.49
CDH13-210ENST00000567445 EMP3P54852 163 aa12.02□□□□□ -0.49
CDH13-210ENST00000567445 NEUROD2Q15784 382 aa12.02□□□□□ -0.49
CDH13-210ENST00000567445 PROSER3Q2NL68 480 aa12.02□□□□□ -0.49
CDH13-210ENST00000567445 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.49
CDH13-210ENST00000567445 CCDC146Q8IYE0 955 aa12.02□□□□□ -0.49
CDH13-210ENST00000567445 HS6ST3Q8IZP7 471 aa12.02□□□□□ -0.49
CDH13-210ENST00000567445 ZNF710Q8N1W2 664 aa12.02□□□□□ -0.49
CDH13-210ENST00000567445 TAF1DQ9H5J8 278 aaPredicted RBP12.02□□□□□ -0.49
CDH13-210ENST00000567445 FZD9O00144 591 aa12.01□□□□□ -0.49
CDH13-210ENST00000567445 ANXA1P04083 346 aa12.01□□□□□ -0.49
CDH13-210ENST00000567445 WDR43Q15061 677 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDH13-210ENST00000567445 LDHDQ86WU2 507 aa12.01□□□□□ -0.49
CDH13-210ENST00000567445 RUNDC1Q96C34 613 aa12.01□□□□□ -0.49
CDH13-210ENST00000567445 RBM17Q96I25 401 aaKnown RBP12.01□□□□□ -0.49
CDH13-210ENST00000567445 CRAMP1Q96RY5 1269 aa12.01□□□□□ -0.49
CDH13-210ENST00000567445 UTP14AQ9BVJ6 771 aaKnown RBP12.01□□□□□ -0.49
CDH13-210ENST00000567445 CHL1O00533 1208 aa12□□□□□ -0.49
CDH13-210ENST00000567445 JDP2Q8WYK2 163 aa12□□□□□ -0.49
CDH13-210ENST00000567445 NLRP3Q96P20 1036 aa12□□□□□ -0.49
CDH13-210ENST00000567445 HACL1Q9UJ83 578 aa12□□□□□ -0.49
CDH13-210ENST00000567445 PPEF1O14829 653 aaPredicted RBP11.99□□□□□ -0.49
CDH13-210ENST00000567445 HSP90AB3PQ58FF7 597 aa11.99□□□□□ -0.49
CDH13-210ENST00000567445 SLC10A5Q5PT55 438 aa11.99□□□□□ -0.49
CDH13-210ENST00000567445 COPS6Q7L5N1 327 aa11.99□□□□□ -0.49
CDH13-210ENST00000567445 GPC2Q8N158 579 aa11.99□□□□□ -0.49
CDH13-210ENST00000567445 XAGE3Q8WTP9 111 aa11.99□□□□□ -0.49
CDH13-210ENST00000567445 NECTIN2Q92692 538 aa11.99□□□□□ -0.49
CDH13-210ENST00000567445 RNF123Q5XPI4 1314 aa11.99□□□□□ -0.49
CDH13-210ENST00000567445 RIMBP2O15034 1052 aa11.98□□□□□ -0.49
CDH13-210ENST00000567445 AIMP1Q12904 312 aaKnown RBP11.98□□□□□ -0.49
CDH13-210ENST00000567445 EAPPQ56P03 285 aaPredicted RBP11.98□□□□□ -0.49
CDH13-210ENST00000567445 DDX21Q9NR30 783 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDH13-210ENST00000567445 ADAMTS8Q9UP79 889 aa11.98□□□□□ -0.49
CDH13-210ENST00000567445 LAS1LQ9Y4W2 734 aaKnown RBP11.98□□□□□ -0.49
CDH13-210ENST00000567445 PASKQ96RG2 1323 aa11.98□□□□□ -0.49
CDH13-210ENST00000567445 TCERG1O14776 1098 aaKnown RBP11.97□□□□□ -0.49
CDH13-210ENST00000567445 EPHX2P34913 555 aa11.97□□□□□ -0.49
CDH13-210ENST00000567445 EIF6P56537 245 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms