RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 CHGBP05060 677 aa16.88■□□□□ 0.29
CDH1-209ENST00000566510 CCDC129Q6ZRS4 1044 aa16.88■□□□□ 0.29
CDH1-209ENST00000566510 SCAND2PQ9GZW5 306 aaPredicted RBP16.88■□□□□ 0.29
CDH1-209ENST00000566510 NLRP2Q9NX02 1062 aa16.88■□□□□ 0.29
CDH1-209ENST00000566510 TAF5LO75529 589 aa16.88■□□□□ 0.29
CDH1-209ENST00000566510 TYRO3Q06418 890 aa16.88■□□□□ 0.29
CDH1-209ENST00000566510 DRC7Q8IY82 874 aa16.88■□□□□ 0.29
CDH1-209ENST00000566510 BICD2Q8TD16 824 aa16.88■□□□□ 0.29
CDH1-209ENST00000566510 RAPGEF4Q8WZA2 1011 aa16.88■□□□□ 0.29
CDH1-209ENST00000566510 DDX11Q96FC9 970 aa16.88■□□□□ 0.29
CDH1-209ENST00000566510 FAM177BA6PVY3 158 aa16.87■□□□□ 0.29
CDH1-209ENST00000566510 GOLGA6L6A8MZA4 724 aa16.87■□□□□ 0.29
CDH1-209ENST00000566510 JAK2O60674 1132 aa16.87■□□□□ 0.29
CDH1-209ENST00000566510 TFCP2Q12800 502 aa16.87■□□□□ 0.29
CDH1-209ENST00000566510 FAM200AQ8TCP9 573 aa16.87■□□□□ 0.29
CDH1-209ENST00000566510 NPHP4O75161 1426 aaPredicted RBP16.87■□□□□ 0.29
CDH1-209ENST00000566510 H3BQV1 296 aa16.87■□□□□ 0.29
CDH1-209ENST00000566510 IFFO2Q5TF58 517 aa16.87■□□□□ 0.29
CDH1-209ENST00000566510 UBE3BQ7Z3V4 1068 aa16.87■□□□□ 0.29
CDH1-209ENST00000566510 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
CDH1-209ENST00000566510 LRRC2Q9BYS8 371 aa16.87■□□□□ 0.29
CDH1-209ENST00000566510 HMG20BQ9P0W2 317 aa16.87■□□□□ 0.29
CDH1-209ENST00000566510 FOSBP53539 338 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
CDH1-209ENST00000566510 CEBPZQ03701 1054 aaKnown RBP16.86■□□□□ 0.29
CDH1-209ENST00000566510 ANO6Q4KMQ2 910 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 ANKRD13DQ6ZTN6 518 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 PRIMPOLQ96LW4 560 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 DBNLQ9UJU6 430 aaKnown RBP16.86■□□□□ 0.29
CDH1-209ENST00000566510 PYCARDQ9ULZ3 195 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 MRVI1Q9Y6F6 885 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 MED23Q9ULK4 1368 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 PTCD1O75127 700 aaKnown RBP16.86■□□□□ 0.29
CDH1-209ENST00000566510 PDIA4P13667 645 aaKnown RBP16.86■□□□□ 0.29
CDH1-209ENST00000566510 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
CDH1-209ENST00000566510 NEK1Q96PY6 1258 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 KCNF1Q9H3M0 494 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 ELP1O95163 1332 aa16.86■□□□□ 0.29
CDH1-209ENST00000566510 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.85■□□□□ 0.29
CDH1-209ENST00000566510 Q6ZUG5 572 aa16.85■□□□□ 0.29
CDH1-209ENST00000566510 MTERF4Q7Z6M4 381 aaKnown RBP16.85■□□□□ 0.29
CDH1-209ENST00000566510 METTL22Q9BUU2 404 aaPredicted RBP16.85■□□□□ 0.29
CDH1-209ENST00000566510 TNNI3KQ59H18 835 aa16.85■□□□□ 0.29
CDH1-209ENST00000566510 DDX46Q7L014 1031 aaKnown RBP16.85■□□□□ 0.29
CDH1-209ENST00000566510 ZNF496Q96IT1 587 aaPredicted RBP16.85■□□□□ 0.29
CDH1-209ENST00000566510 SLC52A2Q9HAB3 445 aa16.85■□□□□ 0.29
CDH1-209ENST00000566510 SNRKQ9NRH2 765 aa16.85■□□□□ 0.29
CDH1-209ENST00000566510 FPGT-TNNI3KV9GXZ4 949 aa16.85■□□□□ 0.29
CDH1-209ENST00000566510 CHD2O14647 1828 aaKnown RBP16.85■□□□□ 0.29
CDH1-209ENST00000566510 KRT32Q14532 448 aa16.84■□□□□ 0.29
CDH1-209ENST00000566510 USP16Q9Y5T5 823 aa16.84■□□□□ 0.29
CDH1-209ENST00000566510 NPHP3Q7Z494 1330 aa16.84■□□□□ 0.29
CDH1-209ENST00000566510 NR1I2O75469 434 aa16.84■□□□□ 0.29
CDH1-209ENST00000566510 PTGS1P23219 599 aa16.84■□□□□ 0.29
CDH1-209ENST00000566510 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
CDH1-209ENST00000566510 BRF1Q92994 677 aa16.84■□□□□ 0.29
CDH1-209ENST00000566510 SPTLC3Q9NUV7 552 aa16.84■□□□□ 0.29
CDH1-209ENST00000566510 NAP1L2Q9ULW6 460 aaPredicted RBP16.84■□□□□ 0.29
CDH1-209ENST00000566510 ATP5JP18859 108 aa16.83■□□□□ 0.29
CDH1-209ENST00000566510 KRT28Q7Z3Y7 464 aa16.83■□□□□ 0.29
CDH1-209ENST00000566510 KIAA1524Q8TCG1 905 aa16.83■□□□□ 0.29
CDH1-209ENST00000566510 DBNDD2Q9BQY9 259 aa16.83■□□□□ 0.29
CDH1-209ENST00000566510 TRIM5Q9C035 493 aa16.83■□□□□ 0.29
CDH1-209ENST00000566510 TPM3P06753 285 aa16.83■□□□□ 0.28
CDH1-209ENST00000566510 PTPN12Q05209 780 aaKnown RBP16.83■□□□□ 0.28
CDH1-209ENST00000566510 CHAF1AQ13111 956 aaPredicted RBP16.83■□□□□ 0.28
CDH1-209ENST00000566510 GTF3C6Q969F1 213 aa16.83■□□□□ 0.28
CDH1-209ENST00000566510 CBX8Q9HC52 389 aa16.83■□□□□ 0.28
CDH1-209ENST00000566510 A0A087WZG4 1122 aa16.83■□□□□ 0.28
CDH1-209ENST00000566510 PPFIA3O75145 1194 aa16.83■□□□□ 0.28
CDH1-209ENST00000566510 CSB-PGBD3P0DP91 1061 aa16.83■□□□□ 0.28
CDH1-209ENST00000566510 NEUROD6Q96NK8 337 aa16.83■□□□□ 0.28
CDH1-209ENST00000566510 OVOS2A0A0G2JMS6 1433 aa16.82■□□□□ 0.28
CDH1-209ENST00000566510 COPRSQ9NQ92 184 aa16.82■□□□□ 0.28
CDH1-209ENST00000566510 DDX19AQ9NUU7 478 aaKnown RBP16.82■□□□□ 0.28
CDH1-209ENST00000566510 KIF3AQ9Y496 699 aa16.82■□□□□ 0.28
CDH1-209ENST00000566510 COL15A1P39059 1388 aa16.82■□□□□ 0.28
CDH1-209ENST00000566510 CYP21A2P08686 494 aa16.82■□□□□ 0.28
CDH1-209ENST00000566510 ALDH8A1Q9H2A2 487 aaPredicted RBP16.82■□□□□ 0.28
CDH1-209ENST00000566510 ERBB3P21860 1342 aa16.81■□□□□ 0.28
CDH1-209ENST00000566510 RGPD5Q99666 1765 aa16.81■□□□□ 0.28
CDH1-209ENST00000566510 TATP17735 454 aaPredicted RBP16.81■□□□□ 0.28
CDH1-209ENST00000566510 TSGA10IPQ3SY00 556 aa16.81■□□□□ 0.28
CDH1-209ENST00000566510 MCMDC2Q4G0Z9 681 aa16.81■□□□□ 0.28
CDH1-209ENST00000566510 CCDC186Q7Z3E2 898 aa16.81■□□□□ 0.28
CDH1-209ENST00000566510 PGBD1Q96JS3 809 aa16.81■□□□□ 0.28
CDH1-209ENST00000566510 DNAJC25Q9H1X3 360 aa16.81■□□□□ 0.28
CDH1-209ENST00000566510 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
CDH1-209ENST00000566510 SLFNL1Q499Z3 407 aa16.81■□□□□ 0.28
CDH1-209ENST00000566510 CLSTN2Q9H4D0 955 aa16.81■□□□□ 0.28
CDH1-209ENST00000566510 ZNF165P49910 485 aa16.8■□□□□ 0.28
CDH1-209ENST00000566510 USPL1Q5W0Q7 1092 aa16.8■□□□□ 0.28
CDH1-209ENST00000566510 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
CDH1-209ENST00000566510 NRBP1Q9UHY1 535 aa16.8■□□□□ 0.28
CDH1-209ENST00000566510 SNRPA1P09661 255 aaKnown RBP16.8■□□□□ 0.28
CDH1-209ENST00000566510 PHKG2P15735 406 aa16.8■□□□□ 0.28
CDH1-209ENST00000566510 ZNF609O15014 1411 aa16.79■□□□□ 0.28
CDH1-209ENST00000566510 RFX5P48382 616 aaPredicted RBP16.79■□□□□ 0.28
CDH1-209ENST00000566510 SCRN1Q12765 414 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms