RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 CREB3L3Q68CJ9 461 aa16.01■□□□□ 0.15
LINC00563-201ENST00000566370 RUFY3Q7L099 469 aa16.01■□□□□ 0.15
LINC00563-201ENST00000566370 TTC14Q96N46 770 aa16.01■□□□□ 0.15
LINC00563-201ENST00000566370 IL25Q9H293 177 aa16.01■□□□□ 0.15
LINC00563-201ENST00000566370 CEP126Q9P2H0 1117 aa16.01■□□□□ 0.15
LINC00563-201ENST00000566370 DBNLQ9UJU6 430 aaKnown RBP16.01■□□□□ 0.15
LINC00563-201ENST00000566370 ZNF330Q9Y3S2 320 aaPredicted RBP16.01■□□□□ 0.15
LINC00563-201ENST00000566370 MED23Q9ULK4 1368 aa16■□□□□ 0.15
LINC00563-201ENST00000566370 BLOC1S2Q6QNY1 142 aa16■□□□□ 0.15
LINC00563-201ENST00000566370 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16■□□□□ 0.15
LINC00563-201ENST00000566370 JARID2Q92833 1246 aaPredicted RBP16■□□□□ 0.15
LINC00563-201ENST00000566370 NEUROD6Q96NK8 337 aa16■□□□□ 0.15
LINC00563-201ENST00000566370 DNAJC2Q99543 621 aaKnown RBP16■□□□□ 0.15
LINC00563-201ENST00000566370 THRAP3Q9Y2W1 955 aaKnown RBP16■□□□□ 0.15
LINC00563-201ENST00000566370 PTH1RQ03431 593 aa15.99■□□□□ 0.15
LINC00563-201ENST00000566370 CCDC158Q5M9N0 1113 aa15.99■□□□□ 0.15
LINC00563-201ENST00000566370 PIGBQ92521 554 aa15.99■□□□□ 0.15
LINC00563-201ENST00000566370 CHMP4CQ96CF2 233 aa15.99■□□□□ 0.15
LINC00563-201ENST00000566370 PLA2G12BQ9BX93 195 aa15.99■□□□□ 0.15
LINC00563-201ENST00000566370 GRPEL1Q9HAV7 217 aa15.99■□□□□ 0.15
LINC00563-201ENST00000566370 MAP3K15Q6ZN16 1313 aa15.99■□□□□ 0.15
LINC00563-201ENST00000566370 CDHR2Q9BYE9 1310 aa15.99■□□□□ 0.15
LINC00563-201ENST00000566370 PALLDQ8WX93 1383 aa15.99■□□□□ 0.15
LINC00563-201ENST00000566370 BCL9O00512 1426 aa15.99■□□□□ 0.15
LINC00563-201ENST00000566370 SLC27A2O14975 620 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 GORABQ5T7V8 394 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 DNAJC10Q8IXB1 793 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 RASEFQ8IZ41 740 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 KBTBD3Q8NAB2 608 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 ZBTB38Q8NAP3 1195 aaPredicted RBP15.98■□□□□ 0.15
LINC00563-201ENST00000566370 FAM227BQ96M60 508 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 DBNDD2Q9BQY9 259 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 ALDH8A1Q9H2A2 487 aaPredicted RBP15.98■□□□□ 0.15
LINC00563-201ENST00000566370 HELLSQ9NRZ9 838 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 JCADQ9P266 1359 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 ZNF609O15014 1411 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 ANKRD36CQ5JPF3 1778 aa15.98■□□□□ 0.15
LINC00563-201ENST00000566370 A0A0D9SFI3 127 aa15.97■□□□□ 0.15
LINC00563-201ENST00000566370 HSP90B1P14625 803 aaKnown RBP15.97■□□□□ 0.15
LINC00563-201ENST00000566370 PDCP20941 246 aa15.97■□□□□ 0.15
LINC00563-201ENST00000566370 MCMDC2Q4G0Z9 681 aa15.97■□□□□ 0.15
LINC00563-201ENST00000566370 GIGYF2Q6Y7W6 1299 aaKnown RBP15.97■□□□□ 0.15
LINC00563-201ENST00000566370 SH3TC1Q8TE82 1336 aa15.97■□□□□ 0.15
LINC00563-201ENST00000566370 ABCC12Q96J65 1359 aa15.97■□□□□ 0.15
LINC00563-201ENST00000566370 ARXQ96QS3 562 aa15.97■□□□□ 0.15
LINC00563-201ENST00000566370 LMBRD1Q9NUN5 540 aa15.97■□□□□ 0.15
LINC00563-201ENST00000566370 COL16A1Q07092 1604 aaPredicted RBP15.96■□□□□ 0.15
LINC00563-201ENST00000566370 PRPF40AO75400 957 aaKnown RBP15.96■□□□□ 0.15
LINC00563-201ENST00000566370 PHF14O94880 888 aa15.96■□□□□ 0.15
LINC00563-201ENST00000566370 HMGB1P09429 215 aaKnown RBP15.96■□□□□ 0.15
LINC00563-201ENST00000566370 IFIT5Q13325 482 aaKnown RBP15.96■□□□□ 0.15
LINC00563-201ENST00000566370 TSGA10IPQ3SY00 556 aa15.96■□□□□ 0.15
LINC00563-201ENST00000566370 PAG1Q9NWQ8 432 aa15.96■□□□□ 0.15
LINC00563-201ENST00000566370 BRPF3Q9ULD4 1205 aa15.96■□□□□ 0.15
LINC00563-201ENST00000566370 ASAP1Q9ULH1 1129 aa15.96■□□□□ 0.15
LINC00563-201ENST00000566370 RPAP1Q9BWH6 1393 aaPredicted RBP15.95■□□□□ 0.14
LINC00563-201ENST00000566370 IFIT1P09914 478 aaKnown RBP15.95■□□□□ 0.14
LINC00563-201ENST00000566370 ATG9AQ7Z3C6 839 aa15.95■□□□□ 0.14
LINC00563-201ENST00000566370 ZDHHC9Q9Y397 364 aa15.95■□□□□ 0.14
LINC00563-201ENST00000566370 PHLPP1O60346 1717 aa15.95■□□□□ 0.14
LINC00563-201ENST00000566370 ERVV-1B6SEH8 477 aa15.94■□□□□ 0.14
LINC00563-201ENST00000566370 ZFYP08048 801 aaPredicted RBP15.94■□□□□ 0.14
LINC00563-201ENST00000566370 PKP1Q13835 747 aa15.94■□□□□ 0.14
LINC00563-201ENST00000566370 TTC39AQ5SRH9 613 aa15.94■□□□□ 0.14
LINC00563-201ENST00000566370 SYTL4Q96C24 671 aaPredicted RBP15.94■□□□□ 0.14
LINC00563-201ENST00000566370 A0A1B0GUL7 405 aa15.94■□□□□ 0.14
LINC00563-201ENST00000566370 STX6O43752 255 aa15.94■□□□□ 0.14
LINC00563-201ENST00000566370 TAF5LO75529 589 aa15.94■□□□□ 0.14
LINC00563-201ENST00000566370 ZSCAN22P10073 491 aaPredicted RBP15.94■□□□□ 0.14
LINC00563-201ENST00000566370 XRCC6P12956 609 aaKnown RBP eCLIP15.94■□□□□ 0.14
LINC00563-201ENST00000566370 RPS6KB1P23443 525 aa15.94■□□□□ 0.14
LINC00563-201ENST00000566370 IL6STP40189 918 aaPredicted RBP15.94■□□□□ 0.14
LINC00563-201ENST00000566370 ZNF445P59923 1031 aa15.94■□□□□ 0.14
LINC00563-201ENST00000566370 USPL1Q5W0Q7 1092 aa15.94■□□□□ 0.14
LINC00563-201ENST00000566370 AK7Q96M32 723 aa15.94■□□□□ 0.14
LINC00563-201ENST00000566370 DOT1LQ8TEK3 1739 aa15.93■□□□□ 0.14
LINC00563-201ENST00000566370 ANKRD18BA2A2Z9 1011 aa15.93■□□□□ 0.14
LINC00563-201ENST00000566370 CYP19A1P11511 503 aaPredicted RBP15.93■□□□□ 0.14
LINC00563-201ENST00000566370 DDB1Q16531 1140 aa15.93■□□□□ 0.14
LINC00563-201ENST00000566370 CAVIN1Q6NZI2 390 aaKnown RBP15.93■□□□□ 0.14
LINC00563-201ENST00000566370 DSCC1Q9BVC3 393 aa15.93■□□□□ 0.14
LINC00563-201ENST00000566370 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.93■□□□□ 0.14
LINC00563-201ENST00000566370 GOLIM4O00461 696 aa15.92■□□□□ 0.14
LINC00563-201ENST00000566370 FOXD4L5Q5VV16 416 aaPredicted RBP15.92■□□□□ 0.14
LINC00563-201ENST00000566370 ZSCAN25Q6NSZ9 544 aa15.92■□□□□ 0.14
LINC00563-201ENST00000566370 DDX46Q7L014 1031 aaKnown RBP15.92■□□□□ 0.14
LINC00563-201ENST00000566370 CCDC83Q8IWF9 413 aa15.92■□□□□ 0.14
LINC00563-201ENST00000566370 KLHL34Q8N239 644 aa15.92■□□□□ 0.14
LINC00563-201ENST00000566370 FAM43AQ8N2R8 423 aa15.92■□□□□ 0.14
LINC00563-201ENST00000566370 FOXD4L4Q8WXT5 416 aaPredicted RBP15.92■□□□□ 0.14
LINC00563-201ENST00000566370 NEK1Q96PY6 1258 aa15.92■□□□□ 0.14
LINC00563-201ENST00000566370 KIF3AQ9Y496 699 aa15.92■□□□□ 0.14
LINC00563-201ENST00000566370 MYH3P11055 1940 aa15.91■□□□□ 0.14
LINC00563-201ENST00000566370 NWD2Q9ULI1 1742 aa15.91■□□□□ 0.14
LINC00563-201ENST00000566370 RNF113AO15541 343 aaKnown RBP15.91■□□□□ 0.14
LINC00563-201ENST00000566370 CSF1RP07333 972 aa15.91■□□□□ 0.14
LINC00563-201ENST00000566370 FGD1P98174 961 aa15.91■□□□□ 0.14
LINC00563-201ENST00000566370 ADCK5Q3MIX3 580 aa15.91■□□□□ 0.14
LINC00563-201ENST00000566370 PPP4R3CPQ6ZMV5 832 aa15.91■□□□□ 0.14
LINC00563-201ENST00000566370 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms