RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 ZDHHC3Q9NYG2 299 aa9.39□□□□□ -0.91
HERPUD1-208ENST00000563911 DCTN4Q9UJW0 460 aa9.39□□□□□ -0.91
HERPUD1-208ENST00000563911 AGLP35573 1532 aa9.39□□□□□ -0.91
HERPUD1-208ENST00000563911 EIF1AXP47813 144 aaKnown RBP9.38□□□□□ -0.91
HERPUD1-208ENST00000563911 BICDL1Q6ZP65 573 aa9.38□□□□□ -0.91
HERPUD1-208ENST00000563911 NPM2Q86SE8 214 aaKnown RBP9.38□□□□□ -0.91
HERPUD1-208ENST00000563911 LRRIQ1Q96JM4 1722 aa9.38□□□□□ -0.91
HERPUD1-208ENST00000563911 MYO5CQ9NQX4 1742 aa9.38□□□□□ -0.91
HERPUD1-208ENST00000563911 ZMYM3Q14202 1370 aa9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 ARHGAP5Q13017 1502 aa9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 CDC42BPBQ9Y5S2 1711 aa9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 ARHGAP35Q9NRY4 1499 aa9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 ZBTB39O15060 712 aa9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 ST8SIA5O15466 376 aa9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 ARSJQ5FYB0 599 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 DNAJC14Q6Y2X3 702 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 NEUROD4Q9HD90 331 aa9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 BRPF3Q9ULD4 1205 aa9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 TROQ12816 1431 aaPredicted RBP9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 KIDINS220Q9ULH0 1771 aa9.37□□□□□ -0.91
HERPUD1-208ENST00000563911 A0A1B0GTH6 734 aa9.36□□□□□ -0.91
HERPUD1-208ENST00000563911 NDUFB5O43674 189 aa9.36□□□□□ -0.91
HERPUD1-208ENST00000563911 ERCC3P19447 782 aa9.36□□□□□ -0.91
HERPUD1-208ENST00000563911 FAM26DQ5JW98 314 aa9.36□□□□□ -0.91
HERPUD1-208ENST00000563911 ETFBKMTQ8IXQ9 262 aa9.36□□□□□ -0.91
HERPUD1-208ENST00000563911 ATP13A2Q9NQ11 1180 aa9.36□□□□□ -0.91
HERPUD1-208ENST00000563911 AAASQ9NRG9 546 aa9.36□□□□□ -0.91
HERPUD1-208ENST00000563911 ANKRD33BA6NCL7 494 aa9.35□□□□□ -0.91
HERPUD1-208ENST00000563911 MAN1A2O60476 641 aa9.35□□□□□ -0.91
HERPUD1-208ENST00000563911 MSX1P28360 303 aa9.35□□□□□ -0.91
HERPUD1-208ENST00000563911 HIF1AQ16665 826 aa9.35□□□□□ -0.91
HERPUD1-208ENST00000563911 ATCAYQ86WG3 371 aa9.35□□□□□ -0.91
HERPUD1-208ENST00000563911 ZSCAN29Q8IWY8 852 aaPredicted RBP9.35□□□□□ -0.91
HERPUD1-208ENST00000563911 TMC1Q8TDI8 760 aa9.35□□□□□ -0.91
HERPUD1-208ENST00000563911 C7orf43Q8WVR3 580 aa9.35□□□□□ -0.91
HERPUD1-208ENST00000563911 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
HERPUD1-208ENST00000563911 ALKQ9UM73 1620 aa9.34□□□□□ -0.91
HERPUD1-208ENST00000563911 TCOF1Q13428 1488 aaKnown RBP9.34□□□□□ -0.91
HERPUD1-208ENST00000563911 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.34□□□□□ -0.915e-6■■□□□ 11.7
HERPUD1-208ENST00000563911 TREML1Q86YW5 311 aa9.34□□□□□ -0.91
HERPUD1-208ENST00000563911 SUSD3Q96L08 255 aa9.34□□□□□ -0.91
HERPUD1-208ENST00000563911 CCDC87Q9NVE4 849 aa9.34□□□□□ -0.91
HERPUD1-208ENST00000563911 ANKIB1Q9P2G1 1089 aa9.34□□□□□ -0.91
HERPUD1-208ENST00000563911 ABCC1P33527 1531 aa9.34□□□□□ -0.91
HERPUD1-208ENST00000563911 MED1Q15648 1581 aaPredicted RBP9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 NPATQ14207 1427 aa9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 PTPRKQ15262 1439 aa9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 ATP4AP20648 1035 aa9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 ZAP70P43403 619 aa9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 HNRNPMP52272 730 aaKnown RBP eCLIP9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 ZNF280CQ8ND82 737 aa9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 HSH2DQ96JZ2 352 aa9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 ZIC5Q96T25 663 aa9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 GPAMQ9HCL2 828 aa9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 DACH1Q9UI36 760 aa9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 BCS1LQ9Y276 419 aa9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 GPC6Q9Y625 555 aaPredicted RBP9.33□□□□□ -0.92
HERPUD1-208ENST00000563911 FZD6O60353 706 aa9.32□□□□□ -0.92
HERPUD1-208ENST00000563911 MICAL2O94851 1124 aa9.32□□□□□ -0.92
HERPUD1-208ENST00000563911 PIP4K2BP78356 416 aa9.32□□□□□ -0.92
HERPUD1-208ENST00000563911 DNM1Q05193 864 aaKnown RBP9.32□□□□□ -0.92
HERPUD1-208ENST00000563911 KLRG1Q96E93 195 aa9.32□□□□□ -0.92
HERPUD1-208ENST00000563911 ASB16Q96NS5 453 aa9.32□□□□□ -0.92
HERPUD1-208ENST00000563911 IRX2Q9BZI1 471 aaPredicted RBP9.32□□□□□ -0.92
HERPUD1-208ENST00000563911 AMOTL2Q9Y2J4 779 aa9.32□□□□□ -0.92
HERPUD1-208ENST00000563911 ITSN2Q9NZM3 1697 aa9.32□□□□□ -0.92
HERPUD1-208ENST00000563911 A0A1W2PNR3 127 aa9.31□□□□□ -0.92
HERPUD1-208ENST00000563911 TGFBR3LH3BV60 316 aa9.31□□□□□ -0.92
HERPUD1-208ENST00000563911 LRRC69Q6ZNQ3 347 aa9.31□□□□□ -0.92
HERPUD1-208ENST00000563911 PGBD3Q8N328 593 aa9.31□□□□□ -0.92
HERPUD1-208ENST00000563911 RBCK1Q9BYM8 510 aa9.31□□□□□ -0.92
HERPUD1-208ENST00000563911 RGS17Q9UGC6 210 aaPredicted RBP9.31□□□□□ -0.92
HERPUD1-208ENST00000563911 DYRK1BQ9Y463 629 aa9.31□□□□□ -0.92
HERPUD1-208ENST00000563911 GJA3Q9Y6H8 435 aa9.31□□□□□ -0.92
HERPUD1-208ENST00000563911 SAMD9LQ8IVG5 1584 aa9.31□□□□□ -0.92
HERPUD1-208ENST00000563911 CNTLNQ9NXG0 1405 aa9.31□□□□□ -0.92
HERPUD1-208ENST00000563911 SOBPA7XYQ1 873 aa9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 F11P03951 625 aa9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 RBM25P49756 843 aaKnown RBP9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 EDEM1Q92611 657 aa9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 CITED4Q96RK1 184 aa9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 RUBCNLQ9H714 662 aa9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 POLIQ9UNA4 740 aa9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 CDK11AQ9UQ88 783 aaPredicted RBP9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 PREX2Q70Z35 1606 aa9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 EEA1Q15075 1411 aa9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 FMN1Q68DA7 1419 aa9.3□□□□□ -0.92
HERPUD1-208ENST00000563911 PLA2R1Q13018 1463 aa9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 PCSK2P16519 638 aa9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 MZF1P28698 734 aaPredicted RBP9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 TMC7Q7Z402 723 aa9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 RGL4Q8IZJ4 473 aa9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 GPR152Q8TDT2 470 aa9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 ZNF428Q96B54 188 aa9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 FAM13BQ9NYF5 915 aa9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 MYO3AQ8NEV4 1616 aa9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 CLTCQ00610 1675 aaKnown RBP9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 CEP170BQ9Y4F5 1589 aaPredicted RBP9.29□□□□□ -0.92
HERPUD1-208ENST00000563911 SUPT6HQ7KZ85 1726 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms