RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 NBPF5PQ86XG9 351 aaPredicted RBP13.39□□□□□ -0.27
SNX29-202ENST00000563308 RBBP6Q7Z6E9 1792 aaKnown RBP13.39□□□□□ -0.27
SNX29-202ENST00000563308 CDHR2Q9BYE9 1310 aa13.39□□□□□ -0.27
SNX29-202ENST00000563308 GMPSP49915 693 aaPredicted RBP13.38□□□□□ -0.27
SNX29-202ENST00000563308 NFE2L2Q16236 605 aa13.38□□□□□ -0.27
SNX29-202ENST00000563308 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNX29-202ENST00000563308 DCPSQ96C86 337 aaKnown RBP13.38□□□□□ -0.27
SNX29-202ENST00000563308 FAM122AQ96E09 287 aa13.38□□□□□ -0.27
SNX29-202ENST00000563308 KIAA0100Q14667 2235 aaKnown RBP13.37□□□□□ -0.27
SNX29-202ENST00000563308 RALBP1Q15311 655 aa13.37□□□□□ -0.27
SNX29-202ENST00000563308 SLC4A8Q2Y0W8 1093 aa13.37□□□□□ -0.27
SNX29-202ENST00000563308 DZIP3Q86Y13 1208 aaKnown RBP13.37□□□□□ -0.27
SNX29-202ENST00000563308 THUMPD2Q9BTF0 503 aaKnown RBP13.37□□□□□ -0.27
SNX29-202ENST00000563308 STXBP5LQ9Y2K9 1186 aa13.37□□□□□ -0.27
SNX29-202ENST00000563308 PPIP5K2O43314 1243 aa13.36□□□□□ -0.27
SNX29-202ENST00000563308 DDX10Q13206 875 aaKnown RBP13.36□□□□□ -0.27
SNX29-202ENST00000563308 TNIP1Q15025 636 aa13.36□□□□□ -0.27
SNX29-202ENST00000563308 RASAL3Q86YV0 1011 aa13.36□□□□□ -0.27
SNX29-202ENST00000563308 A0A1W2PPC1 479 aa13.35□□□□□ -0.27
SNX29-202ENST00000563308 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
SNX29-202ENST00000563308 DLG5Q8TDM6 1919 aa13.35□□□□□ -0.27
SNX29-202ENST00000563308 HIRAP54198 1017 aaPredicted RBP13.34□□□□□ -0.27
SNX29-202ENST00000563308 EIF4A1P60842 406 aaKnown RBP13.34□□□□□ -0.27
SNX29-202ENST00000563308 SREBF2Q12772 1141 aa13.34□□□□□ -0.27
SNX29-202ENST00000563308 CLEC4GQ6UXB4 293 aa13.34□□□□□ -0.27
SNX29-202ENST00000563308 TPTE2Q6XPS3 522 aa13.34□□□□□ -0.27
SNX29-202ENST00000563308 NBPF11Q86T75 865 aa13.34□□□□□ -0.27
SNX29-202ENST00000563308 DEFB123Q8N688 67 aa13.34□□□□□ -0.27
SNX29-202ENST00000563308 CNOT7Q9UIV1 285 aaKnown RBP13.34□□□□□ -0.27
SNX29-202ENST00000563308 ZNRF3Q9ULT6 936 aa13.34□□□□□ -0.27
SNX29-202ENST00000563308 KDM3BQ7LBC6 1761 aa13.33□□□□□ -0.28
SNX29-202ENST00000563308 RGL2O15211 777 aa13.33□□□□□ -0.28
SNX29-202ENST00000563308 PLA2G5P39877 138 aa13.33□□□□□ -0.28
SNX29-202ENST00000563308 OTOP1Q7RTM1 612 aa13.33□□□□□ -0.28
SNX29-202ENST00000563308 SULF1Q8IWU6 871 aa13.33□□□□□ -0.28
SNX29-202ENST00000563308 TRPM4Q8TD43 1214 aa13.33□□□□□ -0.28
SNX29-202ENST00000563308 PNISRQ8TF01 805 aaKnown RBP13.33□□□□□ -0.28
SNX29-202ENST00000563308 NR2E3Q9Y5X4 410 aa13.33□□□□□ -0.28
SNX29-202ENST00000563308 NEFMP07197 916 aa13.32□□□□□ -0.28
SNX29-202ENST00000563308 CXCL9Q07325 125 aa13.32□□□□□ -0.28
SNX29-202ENST00000563308 HLFQ16534 295 aa13.32□□□□□ -0.28
SNX29-202ENST00000563308 ARMC5Q96C12 935 aa13.32□□□□□ -0.28
SNX29-202ENST00000563308 LRCH3Q96II8 777 aa13.32□□□□□ -0.28
SNX29-202ENST00000563308 COL6A3P12111 3177 aa13.32□□□□□ -0.28
SNX29-202ENST00000563308 ALDH1A1P00352 501 aa13.31□□□□□ -0.28
SNX29-202ENST00000563308 DLK2Q6UY11 383 aa13.31□□□□□ -0.28
SNX29-202ENST00000563308 ERO1AQ96HE7 468 aa13.31□□□□□ -0.28
SNX29-202ENST00000563308 VPS33BQ9H267 617 aa13.31□□□□□ -0.28
SNX29-202ENST00000563308 PNNQ9H307 717 aaKnown RBP13.31□□□□□ -0.28
SNX29-202ENST00000563308 ZNF652Q9Y2D9 606 aa13.31□□□□□ -0.28
SNX29-202ENST00000563308 PTPN22Q9Y2R2 807 aa13.31□□□□□ -0.28
SNX29-202ENST00000563308 MYBBP1AQ9BQG0 1328 aaKnown RBP13.31□□□□□ -0.28
SNX29-202ENST00000563308 MAPK8IP3Q9UPT6 1336 aa13.31□□□□□ -0.28
SNX29-202ENST00000563308 MKI67P46013 3256 aaKnown RBP13.3□□□□□ -0.28
SNX29-202ENST00000563308 KLRG2A4D1S0 409 aaPredicted RBP13.3□□□□□ -0.28
SNX29-202ENST00000563308 ADM5C9JUS6 153 aa13.3□□□□□ -0.28
SNX29-202ENST00000563308 TMPOP42166 694 aaKnown RBP13.3□□□□□ -0.28
SNX29-202ENST00000563308 TM4SF4P48230 202 aa13.3□□□□□ -0.28
SNX29-202ENST00000563308 RIPK4P57078 832 aa13.3□□□□□ -0.28
SNX29-202ENST00000563308 FKBP1BP68106 108 aa13.3□□□□□ -0.28
SNX29-202ENST00000563308 AOC3Q16853 763 aa13.3□□□□□ -0.28
SNX29-202ENST00000563308 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
SNX29-202ENST00000563308 SUPT20HQ8NEM7 779 aa13.3□□□□□ -0.28
SNX29-202ENST00000563308 HTATIP2Q9BUP3 242 aa13.3□□□□□ -0.28
SNX29-202ENST00000563308 LAMB4A4D0S4 1761 aa13.3□□□□□ -0.28
SNX29-202ENST00000563308 COL4A5P29400 1685 aa13.29□□□□□ -0.28
SNX29-202ENST00000563308 TTLL7Q6ZT98 887 aa13.29□□□□□ -0.28
SNX29-202ENST00000563308 MICALL2Q8IY33 904 aa13.29□□□□□ -0.28
SNX29-202ENST00000563308 RPGRQ92834 1020 aaKnown RBP13.29□□□□□ -0.28
SNX29-202ENST00000563308 NIP7Q9Y221 180 aaKnown RBP eCLIP13.29□□□□□ -0.28
SNX29-202ENST00000563308 LRP10Q7Z4F1 713 aa13.28□□□□□ -0.28
SNX29-202ENST00000563308 CFHR5Q9BXR6 569 aa13.28□□□□□ -0.28
SNX29-202ENST00000563308 RRP7AQ9Y3A4 280 aaKnown RBP13.28□□□□□ -0.28
SNX29-202ENST00000563308 ERVV-1B6SEH8 477 aa13.27□□□□□ -0.29
SNX29-202ENST00000563308 SOX1O00570 391 aaPredicted RBP13.27□□□□□ -0.29
SNX29-202ENST00000563308 TCERG1O14776 1098 aaKnown RBP13.27□□□□□ -0.29
SNX29-202ENST00000563308 RAD17O75943 681 aa13.27□□□□□ -0.29
SNX29-202ENST00000563308 PDIA6Q15084 440 aa13.27□□□□□ -0.29
SNX29-202ENST00000563308 SLC9C1Q4G0N8 1177 aa13.27□□□□□ -0.29
SNX29-202ENST00000563308 RBM26Q5T8P6 1007 aaKnown RBP13.27□□□□□ -0.29
SNX29-202ENST00000563308 CCDC146Q8IYE0 955 aa13.27□□□□□ -0.29
SNX29-202ENST00000563308 NGEFQ8N5V2 710 aa13.27□□□□□ -0.29
SNX29-202ENST00000563308 EFCC1Q9HA90 598 aa13.27□□□□□ -0.29
SNX29-202ENST00000563308 TSPYL4Q9UJ04 414 aa13.27□□□□□ -0.29
SNX29-202ENST00000563308 MAP3K15Q6ZN16 1313 aa13.27□□□□□ -0.29
SNX29-202ENST00000563308 FAM177BA6PVY3 158 aa13.26□□□□□ -0.29
SNX29-202ENST00000563308 MYL6BP14649 208 aa13.26□□□□□ -0.29
SNX29-202ENST00000563308 TTLL12Q14166 644 aaPredicted RBP13.26□□□□□ -0.29
SNX29-202ENST00000563308 ARHGEF6Q15052 776 aa13.26□□□□□ -0.29
SNX29-202ENST00000563308 TBC1D10BQ4KMP7 808 aaPredicted RBP13.26□□□□□ -0.29
SNX29-202ENST00000563308 SAMD7Q7Z3H4 446 aa13.26□□□□□ -0.29
SNX29-202ENST00000563308 BABAM1Q9NWV8 329 aa13.26□□□□□ -0.29
SNX29-202ENST00000563308 ADAMTS8Q9UP79 889 aa13.26□□□□□ -0.29
SNX29-202ENST00000563308 TRIM35Q9UPQ4 493 aa13.26□□□□□ -0.29
SNX29-202ENST00000563308 ERBB4Q15303 1308 aa13.25□□□□□ -0.29
SNX29-202ENST00000563308 MKRN3Q13064 507 aaKnown RBP13.25□□□□□ -0.29
SNX29-202ENST00000563308 TCIRG1Q13488 830 aa13.25□□□□□ -0.29
SNX29-202ENST00000563308 PROSER3Q2NL68 480 aa13.25□□□□□ -0.29
SNX29-202ENST00000563308 SYMPKQ92797 1274 aaKnown RBP13.25□□□□□ -0.29
SNX29-202ENST00000563308 CDCA5Q96FF9 252 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms