RNA–Protein interactions for RNA: ENST00000562616.1

CCP110-206, Transcript of centriolar coiled-coil protein 110, humanhuman

TSL 3

Gene CCP110, Length 1,679 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-206ENST00000562616 ADAM33Q9BZ11 813 aa11.58□□□□□ -0.56
CCP110-206ENST00000562616 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
CCP110-206ENST00000562616 RNF123Q5XPI4 1314 aa11.57□□□□□ -0.56
CCP110-206ENST00000562616 MTHFSDQ2M296 383 aaKnown RBP11.57□□□□□ -0.56
CCP110-206ENST00000562616 GAS2L2Q8NHY3 880 aa11.57□□□□□ -0.56
CCP110-206ENST00000562616 ZCRB1Q8TBF4 217 aaKnown RBP11.57□□□□□ -0.56
CCP110-206ENST00000562616 DDX54Q8TDD1 881 aaKnown RBP11.57□□□□□ -0.56
CCP110-206ENST00000562616 LRP5O75197 1615 aa11.56□□□□□ -0.56
CCP110-206ENST00000562616 RCCD1A6NED2 376 aa11.56□□□□□ -0.56
CCP110-206ENST00000562616 RTL5Q5HYW3 569 aaPredicted RBP11.56□□□□□ -0.56
CCP110-206ENST00000562616 LAPTM4BQ86VI4 370 aa11.56□□□□□ -0.56
CCP110-206ENST00000562616 SND1Q7KZF4 910 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCP110-206ENST00000562616 MARCH10Q8NA82 808 aaPredicted RBP11.55□□□□□ -0.56
CCP110-206ENST00000562616 ADAMTS19Q8TE59 1207 aa11.55□□□□□ -0.56
CCP110-206ENST00000562616 ZNF775Q96BV0 537 aaPredicted RBP11.55□□□□□ -0.56
CCP110-206ENST00000562616 SPG7Q9UQ90 795 aa11.55□□□□□ -0.56
CCP110-206ENST00000562616 PCDH11XQ9BZA7 1347 aa11.55□□□□□ -0.56
CCP110-206ENST00000562616 PCDH11YQ9BZA8 1340 aa11.55□□□□□ -0.56
CCP110-206ENST00000562616 DLG5Q8TDM6 1919 aa11.55□□□□□ -0.56
CCP110-206ENST00000562616 BAG6P46379 1132 aa11.55□□□□□ -0.56
CCP110-206ENST00000562616 THUMPD2Q9BTF0 503 aaKnown RBP11.55□□□□□ -0.56
CCP110-206ENST00000562616 IVNS1ABPQ9Y6Y0 642 aa11.55□□□□□ -0.56
CCP110-206ENST00000562616 DDX11L8A8MPP1 907 aa11.54□□□□□ -0.56
CCP110-206ENST00000562616 HTATSF1O43719 755 aaKnown RBP11.54□□□□□ -0.56
CCP110-206ENST00000562616 IGSF3O75054 1194 aa11.54□□□□□ -0.56
CCP110-206ENST00000562616 PLEKHO1Q53GL0 409 aaPredicted RBP11.54□□□□□ -0.56
CCP110-206ENST00000562616 RTF1Q92541 710 aaKnown RBP11.54□□□□□ -0.56
CCP110-206ENST00000562616 ZBTB3Q9H5J0 574 aa11.54□□□□□ -0.56
CCP110-206ENST00000562616 IFT57Q9NWB7 429 aa11.54□□□□□ -0.56
CCP110-206ENST00000562616 WBP1LQ9NX94 342 aa11.54□□□□□ -0.56
CCP110-206ENST00000562616 DOT1LQ8TEK3 1739 aa11.54□□□□□ -0.56
CCP110-206ENST00000562616 FANCIQ9NVI1 1328 aa11.54□□□□□ -0.56
CCP110-206ENST00000562616 PPP1R3GB7ZBB8 358 aa11.53□□□□□ -0.56
CCP110-206ENST00000562616 NDUFV2P19404 249 aa11.53□□□□□ -0.56
CCP110-206ENST00000562616 GNAI1P63096 354 aa11.53□□□□□ -0.56
CCP110-206ENST00000562616 DCTN1Q14203 1278 aa11.53□□□□□ -0.56
CCP110-206ENST00000562616 TSR2Q969E8 191 aaKnown RBP11.53□□□□□ -0.56
CCP110-206ENST00000562616 PCDHB15Q9Y5E8 787 aa11.53□□□□□ -0.56
CCP110-206ENST00000562616 GNAT3A8MTJ3 354 aa11.52□□□□□ -0.56
CCP110-206ENST00000562616 CYP27B1O15528 508 aa11.52□□□□□ -0.56
CCP110-206ENST00000562616 ZNF853P0CG23 659 aa11.52□□□□□ -0.56
CCP110-206ENST00000562616 RRP1P56182 461 aaKnown RBP11.52□□□□□ -0.56
CCP110-206ENST00000562616 AMOTQ4VCS5 1084 aa11.52□□□□□ -0.56
CCP110-206ENST00000562616 ZNF530Q6P9A1 599 aaPredicted RBP11.52□□□□□ -0.56
CCP110-206ENST00000562616 VRTNQ9H8Y1 702 aa11.52□□□□□ -0.56
CCP110-206ENST00000562616 LAS1LQ9Y4W2 734 aaKnown RBP11.52□□□□□ -0.56
CCP110-206ENST00000562616 SBF2Q86WG5 1849 aa11.52□□□□□ -0.56
CCP110-206ENST00000562616 PLEKHG2Q9H7P9 1386 aa11.52□□□□□ -0.57
CCP110-206ENST00000562616 CT47B1P0C2W7 299 aaPredicted RBP11.52□□□□□ -0.57
CCP110-206ENST00000562616 R3HDM1Q15032 1099 aaKnown RBP11.52□□□□□ -0.57
CCP110-206ENST00000562616 FAM196AQ6ZSG2 479 aa11.52□□□□□ -0.57
CCP110-206ENST00000562616 MCM10Q7L590 875 aa11.52□□□□□ -0.57
CCP110-206ENST00000562616 TOGARAM1Q9Y4F4 1720 aa11.52□□□□□ -0.57
CCP110-206ENST00000562616 MAP3K5Q99683 1374 aa11.51□□□□□ -0.57
CCP110-206ENST00000562616 PHKG2P15735 406 aa11.51□□□□□ -0.57
CCP110-206ENST00000562616 IRX6P78412 446 aaPredicted RBP11.51□□□□□ -0.57
CCP110-206ENST00000562616 C1orf141Q5JVX7 400 aa11.51□□□□□ -0.57
CCP110-206ENST00000562616 IFNL2Q8IZJ0 200 aa11.51□□□□□ -0.57
CCP110-206ENST00000562616 ACSBG1Q96GR2 724 aa11.51□□□□□ -0.57
CCP110-206ENST00000562616 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
CCP110-206ENST00000562616 NHSQ6T4R5 1651 aa11.51□□□□□ -0.57
CCP110-206ENST00000562616 PALM3A6NDB9 673 aaPredicted RBP11.5□□□□□ -0.57
CCP110-206ENST00000562616 DNAJB2P25686 324 aa11.5□□□□□ -0.57
CCP110-206ENST00000562616 LMOD1P29536 600 aaPredicted RBP11.5□□□□□ -0.57
CCP110-206ENST00000562616 SOX11P35716 441 aa11.5□□□□□ -0.57
CCP110-206ENST00000562616 EXOSC9Q06265 439 aaKnown RBP11.5□□□□□ -0.57
CCP110-206ENST00000562616 ERICH6BQ5W0A0 696 aa11.5□□□□□ -0.57
CCP110-206ENST00000562616 B4GALNT3Q6L9W6 998 aa11.5□□□□□ -0.57
CCP110-206ENST00000562616 ZFRQ96KR1 1074 aaKnown RBP11.5□□□□□ -0.57
CCP110-206ENST00000562616 TNS1Q9HBL0 1735 aaKnown RBP11.5□□□□□ -0.57
CCP110-206ENST00000562616 TRIM37O94972 964 aa11.49□□□□□ -0.57
CCP110-206ENST00000562616 EZH2Q15910 746 aaKnown RBP11.49□□□□□ -0.57
CCP110-206ENST00000562616 PROX2Q3B8N5 592 aa11.49□□□□□ -0.57
CCP110-206ENST00000562616 AKAP4Q5JQC9 854 aa11.49□□□□□ -0.57
CCP110-206ENST00000562616 PRKD2Q9BZL6 878 aa11.49□□□□□ -0.57
CCP110-206ENST00000562616 MBIPQ9NS73 344 aa11.49□□□□□ -0.57
CCP110-206ENST00000562616 CHL1O00533 1208 aa11.49□□□□□ -0.57
CCP110-206ENST00000562616 ATG7O95352 703 aa11.49□□□□□ -0.57
CCP110-206ENST00000562616 RARSP54136 660 aaKnown RBP11.49□□□□□ -0.57
CCP110-206ENST00000562616 USP46P62068 366 aa11.49□□□□□ -0.57
CCP110-206ENST00000562616 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.49□□□□□ -0.57
CCP110-206ENST00000562616 SYTL4Q96C24 671 aaPredicted RBP11.49□□□□□ -0.57
CCP110-206ENST00000562616 SCN11AQ9UI33 1791 aa11.48□□□□□ -0.57
CCP110-206ENST00000562616 ITGB4P16144 1822 aa11.48□□□□□ -0.57
CCP110-206ENST00000562616 VAC14Q08AM6 782 aa11.48□□□□□ -0.57
CCP110-206ENST00000562616 MPRIPQ6WCQ1 1025 aa11.48□□□□□ -0.57
CCP110-206ENST00000562616 IL17REQ8NFR9 667 aa11.48□□□□□ -0.57
CCP110-206ENST00000562616 CAMKK2Q96RR4 588 aa11.48□□□□□ -0.57
CCP110-206ENST00000562616 ALG2Q9H553 416 aa11.48□□□□□ -0.57
CCP110-206ENST00000562616 BCL9O00512 1426 aa11.48□□□□□ -0.57
CCP110-206ENST00000562616 KDM6AO15550 1401 aaPredicted RBP11.48□□□□□ -0.57
CCP110-206ENST00000562616 KAT6BQ8WYB5 2073 aa11.47□□□□□ -0.57
CCP110-206ENST00000562616 KCNQ2O43526 872 aa11.47□□□□□ -0.57
CCP110-206ENST00000562616 KDM4AO75164 1064 aa11.47□□□□□ -0.57
CCP110-206ENST00000562616 BCAR3O75815 825 aa11.47□□□□□ -0.57
CCP110-206ENST00000562616 PTF1AQ7RTS3 328 aa11.47□□□□□ -0.57
CCP110-206ENST00000562616 BTAF1O14981 1849 aa11.47□□□□□ -0.57
CCP110-206ENST00000562616 PLIN1O60240 522 aa11.46□□□□□ -0.57
CCP110-206ENST00000562616 HSP90AB1P08238 724 aaKnown RBP11.46□□□□□ -0.57
CCP110-206ENST00000562616 HELBQ8NG08 1087 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms