RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 FBXO45P0C2W1 286 aa6.77□□□□□ -1.33
CAPN3-211ENST00000562199 IBSPP21815 317 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-211ENST00000562199 HDGFL1Q5TGJ6 251 aa6.77□□□□□ -1.33
CAPN3-211ENST00000562199 SV2AQ7L0J3 742 aa6.77□□□□□ -1.33
CAPN3-211ENST00000562199 PRICKLE2Q7Z3G6 844 aa6.77□□□□□ -1.33
CAPN3-211ENST00000562199 PDILTQ8N807 584 aa6.77□□□□□ -1.33
CAPN3-211ENST00000562199 NANOS1Q8WY41 292 aaKnown RBP6.77□□□□□ -1.33
CAPN3-211ENST00000562199 GJD4Q96KN9 370 aaPredicted RBP6.77□□□□□ -1.33
CAPN3-211ENST00000562199 SMC3Q9UQE7 1217 aa6.77□□□□□ -1.33
CAPN3-211ENST00000562199 SCINQ9Y6U3 715 aa6.77□□□□□ -1.33
CAPN3-211ENST00000562199 TONSLQ96HA7 1378 aa6.77□□□□□ -1.33
CAPN3-211ENST00000562199 SNAPC4Q5SXM2 1469 aa6.77□□□□□ -1.33
CAPN3-211ENST00000562199 VGLL3A8MV65 326 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 CT47B1P0C2W7 299 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-211ENST00000562199 CSB-PGBD3P0DP91 1061 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 RHOQP17081 205 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 TBX4P57082 545 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 CDC37Q16543 378 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-211ENST00000562199 GJC2Q5T442 439 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-211ENST00000562199 UTP14CQ5TAP6 766 aaKnown RBP6.76□□□□□ -1.33
CAPN3-211ENST00000562199 SMAP1Q8IYB5 467 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-211ENST00000562199 TTC30BQ8N4P2 665 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 NGEFQ8N5V2 710 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 ENOX1Q8TC92 643 aaKnown RBP6.76□□□□□ -1.33
CAPN3-211ENST00000562199 BORCS6Q96GS4 357 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 CEP63Q96MT8 703 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 SIN3AQ96ST3 1273 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 BRINP2Q9C0B6 783 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 PRR12Q9ULL5 1215 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 ZNF330Q9Y3S2 320 aaPredicted RBP6.76□□□□□ -1.33
CAPN3-211ENST00000562199 SAMD9Q5K651 1589 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 EHBP1L1Q8N3D4 1523 aa6.76□□□□□ -1.33
CAPN3-211ENST00000562199 SENP3-EIF4A1A0A087X0R7 540 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 MEN1O00255 615 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 PSMC1P62191 440 aaKnown RBP6.75□□□□□ -1.33
CAPN3-211ENST00000562199 PLEKHG6Q3KR16 790 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 LYSMD3Q7Z3D4 306 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 FAM43AQ8N2R8 423 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 ITFG2Q969R8 447 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 PBXIP1Q96AQ6 731 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 BCL2L13Q9BXK5 485 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 ANAPC4Q9UJX5 808 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 FHOD3Q2V2M9 1422 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 FMN1Q68DA7 1419 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 AKNAQ7Z591 1439 aa6.75□□□□□ -1.33
CAPN3-211ENST00000562199 DNMBPQ6XZF7 1577 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 SUPT6HQ7KZ85 1726 aaKnown RBP6.74□□□□□ -1.33
CAPN3-211ENST00000562199 IPO8O15397 1037 aaKnown RBP6.74□□□□□ -1.33
CAPN3-211ENST00000562199 VAMP1P23763 118 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 MAN1A1P33908 653 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 FLT3P36888 993 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 SEPT12Q8IYM1 358 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 BANK1Q8NDB2 785 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 WHAMMQ8TF30 809 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 GIPC2Q8TF65 315 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 RSPH1Q8WYR4 309 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 TRIM52Q96A61 297 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 FAM210AQ96ND0 272 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 PAIP2Q9BPZ3 127 aaKnown RBP6.74□□□□□ -1.33
CAPN3-211ENST00000562199 IFT122Q9HBG6 1241 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 SPC25Q9HBM1 224 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 CUEDC1Q9NWM3 386 aaPredicted RBP6.74□□□□□ -1.33
CAPN3-211ENST00000562199 ADAMTS8Q9UP79 889 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 TBX22Q9Y458 520 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 ABCA5Q8WWZ7 1642 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 ABCA10Q8WWZ4 1543 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 CNTLNQ9NXG0 1405 aa6.74□□□□□ -1.33
CAPN3-211ENST00000562199 ARHGEF11O15085 1522 aa6.73□□□□□ -1.33
CAPN3-211ENST00000562199 ATP5J2-PTCD1G3V325 749 aa6.73□□□□□ -1.33
CAPN3-211ENST00000562199 PPP1R12AO14974 1030 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-211ENST00000562199 RASSF7Q02833 373 aa6.73□□□□□ -1.33
CAPN3-211ENST00000562199 NOM1Q5C9Z4 860 aaKnown RBP6.73□□□□□ -1.33
CAPN3-211ENST00000562199 EFCAB2Q5VUJ9 269 aa6.73□□□□□ -1.33
CAPN3-211ENST00000562199 NT5DC4Q86YG4 428 aa6.73□□□□□ -1.33
CAPN3-211ENST00000562199 SVOPQ8N4V2 548 aa6.73□□□□□ -1.33
CAPN3-211ENST00000562199 CDC5LQ99459 802 aaKnown RBP6.73□□□□□ -1.33
CAPN3-211ENST00000562199 PDCL3Q9H2J4 239 aa6.73□□□□□ -1.33
CAPN3-211ENST00000562199 G3BP2Q9UN86 482 aaKnown RBP6.73□□□□□ -1.33
CAPN3-211ENST00000562199 GNEQ9Y223 722 aaKnown RBP6.73□□□□□ -1.33
CAPN3-211ENST00000562199 COG6Q9Y2V7 657 aa6.73□□□□□ -1.33
CAPN3-211ENST00000562199 NAIPQ13075 1403 aa6.73□□□□□ -1.33
CAPN3-211ENST00000562199 POLR1AO95602 1720 aaPredicted RBP6.73□□□□□ -1.33
CAPN3-211ENST00000562199 TCOF1Q13428 1488 aaKnown RBP6.73□□□□□ -1.33
CAPN3-211ENST00000562199 UGGT2Q9NYU1 1516 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 A0A1W2PRU2 124 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 CD53P19397 219 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 ZNF385CQ66K41 422 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-211ENST00000562199 CCDC174Q6PII3 467 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 NPAS4Q8IUM7 802 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 DRC7Q8IY82 874 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 NLGN1Q8N2Q7 840 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 ZNF512BQ96KM6 892 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-211ENST00000562199 NEUROD6Q96NK8 337 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 CWC25Q9NXE8 425 aaPredicted RBP6.72□□□□□ -1.33
CAPN3-211ENST00000562199 FAM13BQ9NYF5 915 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 SFMBT1Q9UHJ3 866 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 KLF15Q9UIH9 416 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 MYOM3Q5VTT5 1437 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 LRRIQ1Q96JM4 1722 aa6.72□□□□□ -1.33
CAPN3-211ENST00000562199 GRIN2BQ13224 1484 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms