RNA–Protein interactions for RNA: ENST00000561081.5

LRRC49-227, Transcript of leucine rich repeat containing 49, humanhuman

TSL 2

Gene LRRC49, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-227ENST00000561081 ZNF589Q86UQ0 364 aaPredicted RBP12.76□□□□□ -0.37
LRRC49-227ENST00000561081 ZBTB38Q8NAP3 1195 aaPredicted RBP12.76□□□□□ -0.37
LRRC49-227ENST00000561081 DNAJC2Q99543 621 aaKnown RBP12.76□□□□□ -0.37
LRRC49-227ENST00000561081 PLA2G12BQ9BX93 195 aa12.76□□□□□ -0.37
LRRC49-227ENST00000561081 NDUFB9Q9Y6M9 179 aa12.76□□□□□ -0.37
LRRC49-227ENST00000561081 DOT1LQ8TEK3 1739 aa12.76□□□□□ -0.37
LRRC49-227ENST00000561081 ZNF609O15014 1411 aa12.76□□□□□ -0.37
LRRC49-227ENST00000561081 KCNJ4P48050 445 aa12.76□□□□□ -0.37
LRRC49-227ENST00000561081 KLHL40Q2TBA0 621 aa12.76□□□□□ -0.37
LRRC49-227ENST00000561081 SYTL4Q96C24 671 aaPredicted RBP12.76□□□□□ -0.37
LRRC49-227ENST00000561081 LMBRD1Q9NUN5 540 aa12.76□□□□□ -0.37
LRRC49-227ENST00000561081 CYP46A1Q9Y6A2 500 aa12.76□□□□□ -0.37
LRRC49-227ENST00000561081 SLC27A2O14975 620 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 FAM89AQ96GI7 184 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 NEUROD6Q96NK8 337 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
LRRC49-227ENST00000561081 RPAP1Q9BWH6 1393 aaPredicted RBP12.75□□□□□ -0.37
LRRC49-227ENST00000561081 SPATA31A1Q5TZJ5 1347 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 PRIM1P49642 420 aaKnown RBP12.75□□□□□ -0.37
LRRC49-227ENST00000561081 TIMM10P62072 90 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 HLFQ16534 295 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 PUS3Q9BZE2 481 aaKnown RBP12.75□□□□□ -0.37
LRRC49-227ENST00000561081 PDRG1Q9NUG6 133 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 TAF5LO75529 589 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 ADAMTS2O95450 1211 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 CCDC57Q2TAC2 916 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 ARXQ96QS3 562 aa12.75□□□□□ -0.37
LRRC49-227ENST00000561081 THRAP3Q9Y2W1 955 aaKnown RBP12.75□□□□□ -0.37
LRRC49-227ENST00000561081 CSF1RP07333 972 aa12.74□□□□□ -0.37
LRRC49-227ENST00000561081 ZBTB1Q9Y2K1 713 aa12.74□□□□□ -0.37
LRRC49-227ENST00000561081 DDX49Q9Y6V7 483 aaKnown RBP12.74□□□□□ -0.37
LRRC49-227ENST00000561081 ANKRD36CQ5JPF3 1778 aa12.74□□□□□ -0.37
LRRC49-227ENST00000561081 RNF20Q5VTR2 975 aa12.74□□□□□ -0.37
LRRC49-227ENST00000561081 DDX46Q7L014 1031 aaKnown RBP12.74□□□□□ -0.37
LRRC49-227ENST00000561081 NLRP10Q86W26 655 aa12.74□□□□□ -0.37
LRRC49-227ENST00000561081 KBTBD3Q8NAB2 608 aa12.74□□□□□ -0.37
LRRC49-227ENST00000561081 LARP6Q9BRS8 491 aaKnown RBP12.74□□□□□ -0.37
LRRC49-227ENST00000561081 FBXO3Q9UK99 471 aa12.74□□□□□ -0.37
LRRC49-227ENST00000561081 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
LRRC49-227ENST00000561081 A0A1B0GUL7 405 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 HSP90AB3PQ58FF7 597 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 FOXD4L5Q5VV16 416 aaPredicted RBP12.73□□□□□ -0.37
LRRC49-227ENST00000561081 USPL1Q5W0Q7 1092 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 FOXD4L4Q8WXT5 416 aaPredicted RBP12.73□□□□□ -0.37
LRRC49-227ENST00000561081 ISY1Q9ULR0 285 aaKnown RBP12.73□□□□□ -0.37
LRRC49-227ENST00000561081 CCDC9Q9Y3X0 531 aaKnown RBP12.73□□□□□ -0.37
LRRC49-227ENST00000561081 KAT6BQ8WYB5 2073 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 PALLDQ8WX93 1383 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 XRCC6P12956 609 aaKnown RBP eCLIP12.73□□□□□ -0.37
LRRC49-227ENST00000561081 PSMA5P28066 241 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 CHGBP05060 677 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 TSGA10IPQ3SY00 556 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 MCMDC2Q4G0Z9 681 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 TICAM2Q86XR7 235 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 PAG1Q9NWQ8 432 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 HMG20BQ9P0W2 317 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 CEP126Q9P2H0 1117 aa12.73□□□□□ -0.37
LRRC49-227ENST00000561081 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.73□□□□□ -0.37
LRRC49-227ENST00000561081 PRPF40AO75400 957 aaKnown RBP12.72□□□□□ -0.37
LRRC49-227ENST00000561081 LARGE1O95461 756 aa12.72□□□□□ -0.37
LRRC49-227ENST00000561081 GPTP24298 496 aa12.72□□□□□ -0.37
LRRC49-227ENST00000561081 IL6STP40189 918 aaPredicted RBP12.72□□□□□ -0.37
LRRC49-227ENST00000561081 DDB1Q16531 1140 aa12.72□□□□□ -0.37
LRRC49-227ENST00000561081 CHAMP1Q96JM3 812 aa12.72□□□□□ -0.37
LRRC49-227ENST00000561081 ZSCAN31Q96LW9 406 aaPredicted RBP12.72□□□□□ -0.37
LRRC49-227ENST00000561081 SH3TC1Q8TE82 1336 aa12.72□□□□□ -0.37
LRRC49-227ENST00000561081 GOLIM4O00461 696 aa12.72□□□□□ -0.37
LRRC49-227ENST00000561081 SYNE4Q8N205 404 aa12.72□□□□□ -0.37
LRRC49-227ENST00000561081 SH2B1Q9NRF2 756 aaPredicted RBP12.72□□□□□ -0.37
LRRC49-227ENST00000561081 TAF6LQ9Y6J9 622 aa12.72□□□□□ -0.37
LRRC49-227ENST00000561081 NUP98P52948 1817 aa12.72□□□□□ -0.37
LRRC49-227ENST00000561081 SPEF2Q9C093 1822 aa12.71□□□□□ -0.37
LRRC49-227ENST00000561081 ERVV-1B6SEH8 477 aa12.71□□□□□ -0.37
LRRC49-227ENST00000561081 MRE11P49959 708 aa12.71□□□□□ -0.37
LRRC49-227ENST00000561081 IFIT5Q13325 482 aaKnown RBP12.71□□□□□ -0.37
LRRC49-227ENST00000561081 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.71□□□□□ -0.37
LRRC49-227ENST00000561081 CCDC85AQ96PX6 553 aaPredicted RBP12.71□□□□□ -0.37
LRRC49-227ENST00000561081 SEC62Q99442 399 aaKnown RBP12.71□□□□□ -0.37
LRRC49-227ENST00000561081 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.37
LRRC49-227ENST00000561081 COL9A3Q14050 684 aaPredicted RBP12.71□□□□□ -0.38
LRRC49-227ENST00000561081 IFIT1P09914 478 aaKnown RBP12.7□□□□□ -0.38
LRRC49-227ENST00000561081 CCDC129Q6ZRS4 1044 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 ALDH8A1Q9H2A2 487 aaPredicted RBP12.7□□□□□ -0.38
LRRC49-227ENST00000561081 AKAP2Q9Y2D5 859 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 TAF7LQ5H9L4 462 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 BLOC1S2Q6QNY1 142 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 GAS2L3Q86XJ1 694 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 DZIP3Q86Y13 1208 aaKnown RBP12.7□□□□□ -0.38
LRRC49-227ENST00000561081 MARCH10Q8NA82 808 aaPredicted RBP12.7□□□□□ -0.38
LRRC49-227ENST00000561081 TTLL11Q8NHH1 800 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 NWD2Q9ULI1 1742 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 RPS6KB1P23443 525 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 ME3Q16798 604 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 GPT2Q8TD30 523 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 GRPEL1Q9HAV7 217 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 HELLSQ9NRZ9 838 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 SMC3Q9UQE7 1217 aa12.7□□□□□ -0.38
LRRC49-227ENST00000561081 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms