RNA–Protein interactions for RNA: ENST00000561003.5

CSHL1-210, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2 BASIC

Gene CSHL1, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-210ENST00000561003 ABCC4O15439 1325 aa13.47□□□□□ -0.25
CSHL1-210ENST00000561003 RGS19P49795 217 aa13.47□□□□□ -0.25
CSHL1-210ENST00000561003 BRPF1P55201 1214 aaPredicted RBP13.47□□□□□ -0.25
CSHL1-210ENST00000561003 MLLT1Q03111 559 aaPredicted RBP13.47□□□□□ -0.25
CSHL1-210ENST00000561003 AIMP1Q12904 312 aaKnown RBP13.47□□□□□ -0.25
CSHL1-210ENST00000561003 NOGQ13253 232 aa13.47□□□□□ -0.25
CSHL1-210ENST00000561003 RALBP1Q15311 655 aa13.47□□□□□ -0.25
CSHL1-210ENST00000561003 C3orf67Q6ZVT6 689 aa13.47□□□□□ -0.25
CSHL1-210ENST00000561003 SIPA1L3O60292 1781 aaPredicted RBP13.46□□□□□ -0.25
CSHL1-210ENST00000561003 RAD17O75943 681 aa13.46□□□□□ -0.25
CSHL1-210ENST00000561003 HCLS1P14317 486 aaPredicted RBP13.46□□□□□ -0.25
CSHL1-210ENST00000561003 RPS12P25398 132 aaKnown RBP13.46□□□□□ -0.25
CSHL1-210ENST00000561003 WASHC4Q2M389 1173 aa13.46□□□□□ -0.25
CSHL1-210ENST00000561003 ANKRD13DQ6ZTN6 518 aa13.46□□□□□ -0.25
CSHL1-210ENST00000561003 LRP10Q7Z4F1 713 aa13.46□□□□□ -0.25
CSHL1-210ENST00000561003 XAGE3Q8WTP9 111 aa13.46□□□□□ -0.25
CSHL1-210ENST00000561003 CCDC102AQ96A19 550 aa13.46□□□□□ -0.25
CSHL1-210ENST00000561003 EYA3Q99504 573 aa13.46□□□□□ -0.25
CSHL1-210ENST00000561003 CHMP4AQ9BY43 222 aa13.46□□□□□ -0.25
CSHL1-210ENST00000561003 COL11A2P13942 1736 aaPredicted RBP13.46□□□□□ -0.25
CSHL1-210ENST00000561003 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
CSHL1-210ENST00000561003 C2orf69Q8N8R5 385 aa13.45□□□□□ -0.26
CSHL1-210ENST00000561003 GLIS2Q9BZE0 524 aaPredicted RBP13.45□□□□□ -0.26
CSHL1-210ENST00000561003 DBF4Q9UBU7 674 aaPredicted RBP13.45□□□□□ -0.26
CSHL1-210ENST00000561003 NSFL1CQ9UNZ2 370 aaKnown RBP13.45□□□□□ -0.26
CSHL1-210ENST00000561003 CHL1O00533 1208 aa13.44□□□□□ -0.26
CSHL1-210ENST00000561003 HOXB7P09629 217 aa13.44□□□□□ -0.26
CSHL1-210ENST00000561003 FMR1Q06787 632 aaKnown RBP eCLIP13.44□□□□□ -0.26
CSHL1-210ENST00000561003 SF3B3Q15393 1217 aaKnown RBP13.44□□□□□ -0.26
CSHL1-210ENST00000561003 PLBD2Q8NHP8 589 aa13.44□□□□□ -0.26
CSHL1-210ENST00000561003 DCPSQ96C86 337 aaKnown RBP13.44□□□□□ -0.26
CSHL1-210ENST00000561003 G3V3G9 751 aa13.43□□□□□ -0.26
CSHL1-210ENST00000561003 C6orf229H3BNL8 230 aa13.43□□□□□ -0.26
CSHL1-210ENST00000561003 AOC2O75106 756 aa13.43□□□□□ -0.26
CSHL1-210ENST00000561003 HIRAP54198 1017 aaPredicted RBP13.43□□□□□ -0.26
CSHL1-210ENST00000561003 HUNKP57058 714 aa13.43□□□□□ -0.26
CSHL1-210ENST00000561003 TRIM28Q13263 835 aaKnown RBP13.43□□□□□ -0.26
CSHL1-210ENST00000561003 DCAF8Q5TAQ9 597 aa13.43□□□□□ -0.26
CSHL1-210ENST00000561003 USP48Q86UV5 1035 aa13.43□□□□□ -0.26
CSHL1-210ENST00000561003 REM2Q8IYK8 340 aaPredicted RBP13.43□□□□□ -0.26
CSHL1-210ENST00000561003 ZC3H12CQ9C0D7 883 aaKnown RBP13.43□□□□□ -0.26
CSHL1-210ENST00000561003 ZNF408Q9H9D4 720 aa13.43□□□□□ -0.26
CSHL1-210ENST00000561003 HYPKQ9NX55 129 aa13.43□□□□□ -0.26
CSHL1-210ENST00000561003 RPS8P62241 208 aaKnown RBP13.42□□□□□ -0.26
CSHL1-210ENST00000561003 PROSER3Q2NL68 480 aa13.42□□□□□ -0.26
CSHL1-210ENST00000561003 MICALL2Q8IY33 904 aa13.42□□□□□ -0.26
CSHL1-210ENST00000561003 BCORQ6W2J9 1755 aa13.42□□□□□ -0.26
CSHL1-210ENST00000561003 ARFGEF2Q9Y6D5 1785 aa13.41□□□□□ -0.26
CSHL1-210ENST00000561003 ANXA1P04083 346 aa13.41□□□□□ -0.26
CSHL1-210ENST00000561003 FAM161AQ3B820 660 aa13.41□□□□□ -0.26
CSHL1-210ENST00000561003 KRT26Q7Z3Y9 468 aa13.41□□□□□ -0.26
CSHL1-210ENST00000561003 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
CSHL1-210ENST00000561003 VIRMAQ69YN4 1812 aaKnown RBP13.41□□□□□ -0.26
CSHL1-210ENST00000561003 NEUROD2Q15784 382 aa13.4□□□□□ -0.26
CSHL1-210ENST00000561003 HDGFL1Q5TGJ6 251 aa13.4□□□□□ -0.26
CSHL1-210ENST00000561003 RGMBQ6NW40 437 aa13.4□□□□□ -0.26
CSHL1-210ENST00000561003 SULF1Q8IWU6 871 aa13.4□□□□□ -0.26
CSHL1-210ENST00000561003 FAM89AQ96GI7 184 aa13.4□□□□□ -0.26
CSHL1-210ENST00000561003 CFAP44Q96MT7 982 aa13.4□□□□□ -0.26
CSHL1-210ENST00000561003 ISCA1Q9BUE6 129 aa13.4□□□□□ -0.26
CSHL1-210ENST00000561003 SAGE1Q9NXZ1 904 aa13.4□□□□□ -0.26
CSHL1-210ENST00000561003 LAS1LQ9Y4W2 734 aaKnown RBP13.4□□□□□ -0.26
CSHL1-210ENST00000561003 YDJCA8MPS7 323 aa13.39□□□□□ -0.27
CSHL1-210ENST00000561003 PSMD14O00487 310 aa13.39□□□□□ -0.27
CSHL1-210ENST00000561003 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
CSHL1-210ENST00000561003 DGKZQ13574 1117 aa13.39□□□□□ -0.27
CSHL1-210ENST00000561003 TRPM4Q8TD43 1214 aa13.39□□□□□ -0.27
CSHL1-210ENST00000561003 RUNDC1Q96C34 613 aa13.39□□□□□ -0.27
CSHL1-210ENST00000561003 MCOLN1Q9GZU1 580 aa13.39□□□□□ -0.27
CSHL1-210ENST00000561003 GBA2Q9HCG7 927 aaPredicted RBP13.39□□□□□ -0.27
CSHL1-210ENST00000561003 ZBTB12Q9Y330 459 aaPredicted RBP13.39□□□□□ -0.27
CSHL1-210ENST00000561003 ADAMTSL1Q8N6G6 1762 aa13.38□□□□□ -0.27
CSHL1-210ENST00000561003 IRS4O14654 1257 aaPredicted RBP13.38□□□□□ -0.27
CSHL1-210ENST00000561003 VIL1P09327 827 aaKnown RBP13.38□□□□□ -0.27
CSHL1-210ENST00000561003 ZNF157P51786 506 aaPredicted RBP13.38□□□□□ -0.27
CSHL1-210ENST00000561003 CALD1Q05682 793 aaKnown RBP13.38□□□□□ -0.27
CSHL1-210ENST00000561003 WDR43Q15061 677 aaKnown RBP eCLIP13.38□□□□□ -0.27
CSHL1-210ENST00000561003 RBM26Q5T8P6 1007 aaKnown RBP13.38□□□□□ -0.27
CSHL1-210ENST00000561003 SAMD7Q7Z3H4 446 aa13.38□□□□□ -0.27
CSHL1-210ENST00000561003 RIC3Q7Z5B4 369 aa13.38□□□□□ -0.27
CSHL1-210ENST00000561003 PODXL2Q9NZ53 605 aa13.38□□□□□ -0.27
CSHL1-210ENST00000561003 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
CSHL1-210ENST00000561003 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
CSHL1-210ENST00000561003 POLLQ9UGP5 575 aa13.38□□□□□ -0.27
CSHL1-210ENST00000561003 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
CSHL1-210ENST00000561003 ECE2O60344 883 aa13.37□□□□□ -0.27
CSHL1-210ENST00000561003 SLC34A2O95436 690 aa13.37□□□□□ -0.27
CSHL1-210ENST00000561003 TBC1D10BQ4KMP7 808 aaPredicted RBP13.37□□□□□ -0.27
CSHL1-210ENST00000561003 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
CSHL1-210ENST00000561003 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
CSHL1-210ENST00000561003 TBC1D16Q8TBP0 767 aa13.37□□□□□ -0.27
CSHL1-210ENST00000561003 CELF1Q92879 486 aaKnown RBP13.37□□□□□ -0.27
CSHL1-210ENST00000561003 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
CSHL1-210ENST00000561003 ATP5J2-PTCD1G3V325 749 aa13.36□□□□□ -0.27
CSHL1-210ENST00000561003 MMP14P50281 582 aa13.36□□□□□ -0.27
CSHL1-210ENST00000561003 FKBP1BP68106 108 aa13.36□□□□□ -0.27
CSHL1-210ENST00000561003 GPSM2P81274 684 aa13.36□□□□□ -0.27
CSHL1-210ENST00000561003 GOLGA2Q08379 1002 aa13.36□□□□□ -0.27
CSHL1-210ENST00000561003 CCDC152Q4G0S7 254 aa13.36□□□□□ -0.27
CSHL1-210ENST00000561003 GGA1Q9UJY5 639 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms