RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 ZMYM1Q5SVZ6 1142 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 TOM1L2Q6ZVM7 507 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 TCP11L2Q8N4U5 519 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 C8orf37Q96NL8 207 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 USP21Q9UK80 565 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 OVOS2A0A0G2JMS6 1433 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 NRAPQ86VF7 1730 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 AFF2P51816 1311 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 APAF1O14727 1248 aa7.22□□□□□ -1.25
ZEB1-220ENST00000560909 HTATSF1O43719 755 aaKnown RBP7.22□□□□□ -1.25
ZEB1-220ENST00000560909 CSB-PGBD3P0DP91 1061 aa7.22□□□□□ -1.25
ZEB1-220ENST00000560909 MTHFSDQ2M296 383 aaKnown RBP7.22□□□□□ -1.25
ZEB1-220ENST00000560909 BRICD5Q6PL45 260 aa7.22□□□□□ -1.25
ZEB1-220ENST00000560909 USHBP1Q8N6Y0 703 aa7.22□□□□□ -1.25
ZEB1-220ENST00000560909 EHBP1Q8NDI1 1231 aa7.22□□□□□ -1.25
ZEB1-220ENST00000560909 STRN4Q9NRL3 753 aa7.22□□□□□ -1.25
ZEB1-220ENST00000560909 TRPC5Q9UL62 973 aaPredicted RBP7.22□□□□□ -1.25
ZEB1-220ENST00000560909 SALL2Q9Y467 1007 aaPredicted RBP7.22□□□□□ -1.25
ZEB1-220ENST00000560909 MEGF6O75095 1541 aa7.22□□□□□ -1.25
ZEB1-220ENST00000560909 IL2RBP14784 551 aa7.21□□□□□ -1.26
ZEB1-220ENST00000560909 TATP17735 454 aaPredicted RBP7.21□□□□□ -1.26
ZEB1-220ENST00000560909 PLEKHO1Q53GL0 409 aaPredicted RBP7.21□□□□□ -1.26
ZEB1-220ENST00000560909 CCDC146Q8IYE0 955 aa7.21□□□□□ -1.26
ZEB1-220ENST00000560909 GAS2L2Q8NHY3 880 aa7.21□□□□□ -1.26
ZEB1-220ENST00000560909 RAPGEF4Q8WZA2 1011 aa7.21□□□□□ -1.26
ZEB1-220ENST00000560909 GJD4Q96KN9 370 aaPredicted RBP7.21□□□□□ -1.26
ZEB1-220ENST00000560909 RGS17Q9UGC6 210 aaPredicted RBP7.21□□□□□ -1.26
ZEB1-220ENST00000560909 ZBED9Q6R2W3 1325 aa7.21□□□□□ -1.26
ZEB1-220ENST00000560909 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.21□□□□□ -1.26
ZEB1-220ENST00000560909 RGPD5Q99666 1765 aa7.2□□□□□ -1.26
ZEB1-220ENST00000560909 PLCH1Q4KWH8 1693 aa7.2□□□□□ -1.26
ZEB1-220ENST00000560909 CYP27B1O15528 508 aa7.2□□□□□ -1.26
ZEB1-220ENST00000560909 AKAP4Q5JQC9 854 aa7.2□□□□□ -1.26
ZEB1-220ENST00000560909 MEX3CQ5U5Q3 659 aaKnown RBP7.2□□□□□ -1.26
ZEB1-220ENST00000560909 ZNF772Q68DY9 489 aaPredicted RBP7.2□□□□□ -1.26
ZEB1-220ENST00000560909 WDR63Q8IWG1 891 aa7.2□□□□□ -1.26
ZEB1-220ENST00000560909 WWC1Q8IX03 1113 aa7.2□□□□□ -1.26
ZEB1-220ENST00000560909 TRMT2AQ8IZ69 625 aaKnown RBP7.2□□□□□ -1.26
ZEB1-220ENST00000560909 ZCRB1Q8TBF4 217 aaKnown RBP7.2□□□□□ -1.26
ZEB1-220ENST00000560909 IL16Q14005 1332 aa7.2□□□□□ -1.26
ZEB1-220ENST00000560909 CEMIPQ8WUJ3 1361 aa7.2□□□□□ -1.26
ZEB1-220ENST00000560909 BCL9O00512 1426 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 ZNF853P0CG23 659 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 PHKG2P15735 406 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 ITGB7P26010 798 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 MMP16P51512 607 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 RIPK4P57078 832 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 FUT2Q10981 343 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 PDE3BQ13370 1112 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 C6orf118Q5T5N4 469 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 RNF19BQ6ZMZ0 732 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 ILDR2Q71H61 639 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 BEND7Q8N7W2 519 aaPredicted RBP7.19□□□□□ -1.26
ZEB1-220ENST00000560909 IL17REQ8NFR9 667 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 NANOS1Q8WY41 292 aaKnown RBP7.19□□□□□ -1.26
ZEB1-220ENST00000560909 QTRT2Q9H974 415 aaKnown RBP7.19□□□□□ -1.26
ZEB1-220ENST00000560909 SPG7Q9UQ90 795 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 MAPK8IP3Q9UPT6 1336 aa7.19□□□□□ -1.26
ZEB1-220ENST00000560909 GNAT3A8MTJ3 354 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 NEFMP07197 916 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 RBM6P78332 1123 aaKnown RBP7.18□□□□□ -1.26
ZEB1-220ENST00000560909 HNRNPUQ00839 825 aaKnown RBP eCLIP7.18□□□□□ -1.26
ZEB1-220ENST00000560909 LMOD3Q0VAK6 560 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 ZNF530Q6P9A1 599 aaPredicted RBP7.18□□□□□ -1.26
ZEB1-220ENST00000560909 PODNQ7Z5L7 613 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 IFNL2Q8IZJ0 200 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 ENAMQ9NRM1 1142 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 WDR70Q9NW82 654 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 BABAM1Q9NWV8 329 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 ADGRG1Q9Y653 693 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 MAP3K5Q99683 1374 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 RGPD2P0DJD1 1756 aa7.18□□□□□ -1.26
ZEB1-220ENST00000560909 GLI3P10071 1580 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 ADAMTS7Q9UKP4 1686 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 SCO2A0A1W2PP80 73 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 EXOC5O00471 708 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 HSP90AB1P08238 724 aaKnown RBP7.17□□□□□ -1.26
ZEB1-220ENST00000560909 TIMP2P16035 220 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 ATP6V1AP38606 617 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 E2F4Q16254 413 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 CCDC24Q8N4L8 307 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 ARIH1Q9Y4X5 557 aaPredicted RBP7.17□□□□□ -1.26
ZEB1-220ENST00000560909 PKD1L3Q7Z443 1732 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 PCDH11XQ9BZA7 1347 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 PCDH11YQ9BZA8 1340 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 TNS2Q63HR2 1409 aa7.17□□□□□ -1.26
ZEB1-220ENST00000560909 ARID1BQ8NFD5 2236 aaPredicted RBP7.16□□□□□ -1.26
ZEB1-220ENST00000560909 THSD7AQ9UPZ6 1657 aa7.16□□□□□ -1.26
ZEB1-220ENST00000560909 ERVV-2B6SEH9 535 aa7.16□□□□□ -1.26
ZEB1-220ENST00000560909 CHL1O00533 1208 aa7.16□□□□□ -1.26
ZEB1-220ENST00000560909 RNMTO43148 476 aaKnown RBP7.16□□□□□ -1.26
ZEB1-220ENST00000560909 CELA2BP08218 269 aaPredicted RBP7.16□□□□□ -1.26
ZEB1-220ENST00000560909 SLFN5Q08AF3 891 aa7.16□□□□□ -1.26
ZEB1-220ENST00000560909 DDB1Q16531 1140 aa7.16□□□□□ -1.26
ZEB1-220ENST00000560909 POTEAQ6S8J7 498 aa7.16□□□□□ -1.26
ZEB1-220ENST00000560909 MARCH10Q8NA82 808 aaPredicted RBP7.16□□□□□ -1.26
ZEB1-220ENST00000560909 USP35Q9P2H5 1018 aa7.16□□□□□ -1.26
ZEB1-220ENST00000560909 RRP7AQ9Y3A4 280 aaKnown RBP7.16□□□□□ -1.26
ZEB1-220ENST00000560909 KDM6AO15550 1401 aaPredicted RBP7.16□□□□□ -1.26
ZEB1-220ENST00000560909 E9PSI1 815 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms