RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 PHACTR3Q96KR7 559 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 KAT14Q9H8E8 782 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 TNNQ9UQP3 1299 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 CCDC66A2RUB6 948 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 GSDMDP57764 484 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 LRSAM1Q6UWE0 723 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 FAM177A1Q8N128 213 aaPredicted RBP8.02□□□□□ -1.13
AP4E1-203ENST00000560508 PPP1R1BQ9UD71 204 aaPredicted RBP8.02□□□□□ -1.13
AP4E1-203ENST00000560508 TOP1P11387 765 aaKnown RBP8.02□□□□□ -1.13
AP4E1-203ENST00000560508 CCDC96Q2M329 555 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 C16orf71Q8IYS4 520 aaPredicted RBP8.02□□□□□ -1.13
AP4E1-203ENST00000560508 MPNDQ8N594 471 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 NGLY1Q96IV0 654 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 PAG1Q9NWQ8 432 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 CLTCL1P53675 1640 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 ATP7BP35670 1465 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 AOX1Q06278 1338 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 PPP1R12BO60237 982 aaPredicted RBP8.02□□□□□ -1.13
AP4E1-203ENST00000560508 SFPQP23246 707 aaKnown RBP eCLIP8.02□□□□□ -1.13
AP4E1-203ENST00000560508 NMIQ13287 307 aaPredicted RBP8.02□□□□□ -1.13
AP4E1-203ENST00000560508 PLEKHM2Q8IWE5 1019 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 JARID2Q92833 1246 aaPredicted RBP8.02□□□□□ -1.13
AP4E1-203ENST00000560508 DCAF5Q96JK2 942 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 CEP152O94986 1710 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 NCKAP5LQ9HCH0 1330 aa8.02□□□□□ -1.13
AP4E1-203ENST00000560508 CAVIN2O95810 425 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 SMC5Q8IY18 1101 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 SMARCC1Q92922 1105 aaPredicted RBP8.01□□□□□ -1.13
AP4E1-203ENST00000560508 RFC4P35249 363 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 SLC39A6Q13433 755 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 PTPN14Q15678 1187 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 LINS1Q8NG48 757 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 NYXQ9GZU5 481 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.01□□□□□ -1.13
AP4E1-203ENST00000560508 MAP3K19Q56UN5 1328 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 RAD50Q92878 1312 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 CCDC194A0A1B0GVG4 234 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 ATP6V1AP38606 617 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 Q6ZUG5 572 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 ANKRD18AQ8IVF6 992 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 C19orf44Q9H6X5 657 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 RBM27Q9P2N5 1060 aaKnown RBP8.01□□□□□ -1.13
AP4E1-203ENST00000560508 ORC3Q9UBD5 711 aaPredicted RBP8.01□□□□□ -1.13
AP4E1-203ENST00000560508 ZBTB7BO15156 539 aaPredicted RBP8.01□□□□□ -1.13
AP4E1-203ENST00000560508 ATP2B3Q16720 1220 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 CCDC144CPQ8IYA2 1237 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 UTP14AQ9BVJ6 771 aaKnown RBP8.01□□□□□ -1.13
AP4E1-203ENST00000560508 SLC26A6Q9BXS9 759 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 MATR3P43243 847 aaKnown RBP eCLIP8.01□□□□□ -1.13
AP4E1-203ENST00000560508 JAKMIP3Q5VZ66 844 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 TMTC2Q8N394 836 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 CNKSR2Q8WXI2 1034 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 TRIM35Q9UPQ4 493 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 LRRIQ1Q96JM4 1722 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 HAND2P61296 217 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 AMPD3Q01432 767 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 WTAPQ15007 396 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 PDCL3Q9H2J4 239 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 SNRKQ9NRH2 765 aa8.01□□□□□ -1.13
AP4E1-203ENST00000560508 KDM2BQ8NHM5 1336 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 SPA17Q15506 151 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 CKAP2LQ8IYA6 745 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 BICC1Q9H694 974 aaKnown RBP8□□□□□ -1.13
AP4E1-203ENST00000560508 ADCY5O95622 1261 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 GNAT2P19087 354 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 ARHGAP29Q52LW3 1261 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 CALML4Q96GE6 196 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 SEPT11Q9NVA2 429 aaKnown RBP8□□□□□ -1.13
AP4E1-203ENST00000560508 RTL9Q8NET4 1388 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 TSPY2A6NKD2 308 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 KIF5CO60282 957 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 AXDND1Q5T1B0 1012 aaPredicted RBP8□□□□□ -1.13
AP4E1-203ENST00000560508 GCP02774 474 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 HOXB7P09629 217 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 FAM114A1Q8IWE2 563 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 NFATC2IPQ8NCF5 419 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 SLC4A4Q9Y6R1 1079 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 KLF18A0A0U1RQI7 1052 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 KIF20AO95235 890 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 RUFY3Q7L099 469 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 TAF4BQ92750 862 aa8□□□□□ -1.13
AP4E1-203ENST00000560508 ERVK-7P63135 1459 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 PATL2C9JE40 543 aaKnown RBP7.99□□□□□ -1.13
AP4E1-203ENST00000560508 RNF113AO15541 343 aaKnown RBP7.99□□□□□ -1.13
AP4E1-203ENST00000560508 RAB3GAP1Q15042 981 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 LMBR1LQ6UX01 489 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 PDCL2Q8N4E4 241 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 KCNG4Q8TDN1 519 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 GDPD2Q9HCC8 539 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 TFIP11Q9UBB9 837 aaKnown RBP7.99□□□□□ -1.13
AP4E1-203ENST00000560508 CNPY2Q9Y2B0 182 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 MAGI2Q86UL8 1455 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 LAMC1P11047 1609 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 F13A1P00488 732 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 MCM3P25205 808 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 PPP4R3BQ5MIZ7 849 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 IFIT1BQ5T764 474 aaKnown RBP7.99□□□□□ -1.13
AP4E1-203ENST00000560508 NBPF6Q5VWK0 638 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 KLHL10Q6JEL2 608 aa7.99□□□□□ -1.13
AP4E1-203ENST00000560508 USP48Q86UV5 1035 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms