RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 ANKRD36CQ5JPF3 1778 aa13.83□□□□□ -0.19
CDC42BPB-207ENST00000560492 RIC1Q4ADV7 1423 aa13.83□□□□□ -0.2
CDC42BPB-207ENST00000560492 SNED1Q8TER0 1413 aa13.83□□□□□ -0.2
CDC42BPB-207ENST00000560492 EIF2S2P20042 333 aaKnown RBP13.83□□□□□ -0.2
CDC42BPB-207ENST00000560492 HOXA10P31260 410 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPB-207ENST00000560492 EIF4A1P60842 406 aaKnown RBP13.83□□□□□ -0.2
CDC42BPB-207ENST00000560492 EVX2Q03828 476 aa13.83□□□□□ -0.2
CDC42BPB-207ENST00000560492 SUPT20HQ8NEM7 779 aa13.83□□□□□ -0.2
CDC42BPB-207ENST00000560492 ADARB2Q9NS39 739 aaKnown RBP13.83□□□□□ -0.2
CDC42BPB-207ENST00000560492 AOC2O75106 756 aa13.82□□□□□ -0.2
CDC42BPB-207ENST00000560492 CELF2O95319 508 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-207ENST00000560492 NTSR2O95665 410 aa13.82□□□□□ -0.2
CDC42BPB-207ENST00000560492 PARP10Q53GL7 1025 aa13.82□□□□□ -0.2
CDC42BPB-207ENST00000560492 GIGYF2Q6Y7W6 1299 aaKnown RBP13.82□□□□□ -0.2
CDC42BPB-207ENST00000560492 CASP8AP2Q9UKL3 1982 aa13.82□□□□□ -0.2
CDC42BPB-207ENST00000560492 GMPSP49915 693 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-207ENST00000560492 DPP8Q6V1X1 898 aaPredicted RBP13.81□□□□□ -0.2
CDC42BPB-207ENST00000560492 C3orf67Q6ZVT6 689 aa13.81□□□□□ -0.2
CDC42BPB-207ENST00000560492 ZNF34Q8IZ26 560 aa13.81□□□□□ -0.2
CDC42BPB-207ENST00000560492 UTP14AQ9BVJ6 771 aaKnown RBP13.81□□□□□ -0.2
CDC42BPB-207ENST00000560492 GPRC5DQ9NZD1 345 aa13.81□□□□□ -0.2
CDC42BPB-207ENST00000560492 TSPYL4Q9UJ04 414 aa13.81□□□□□ -0.2
CDC42BPB-207ENST00000560492 TLL2Q9Y6L7 1015 aa13.81□□□□□ -0.2
CDC42BPB-207ENST00000560492 TAF1P21675 1872 aa13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 RAD17O75943 681 aa13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 AIMP1Q12904 312 aaKnown RBP13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 NFE2L2Q16236 605 aa13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 CST9Q5W186 159 aa13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 CIAPIN1Q6FI81 312 aa13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 NECTIN2Q92692 538 aa13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 GLIS2Q9BZE0 524 aaPredicted RBP13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 ZNRF3Q9ULT6 936 aa13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 ATP6V0A2Q9Y487 856 aa13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 ABCC4O15439 1325 aa13.8□□□□□ -0.2
CDC42BPB-207ENST00000560492 ANXA1P04083 346 aa13.79□□□□□ -0.2
CDC42BPB-207ENST00000560492 MLLT1Q03111 559 aaPredicted RBP13.79□□□□□ -0.2
CDC42BPB-207ENST00000560492 CXCL9Q07325 125 aa13.79□□□□□ -0.2
CDC42BPB-207ENST00000560492 MPNDQ8N594 471 aa13.79□□□□□ -0.2
CDC42BPB-207ENST00000560492 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
CDC42BPB-207ENST00000560492 ERBB4Q15303 1308 aa13.79□□□□□ -0.2
CDC42BPB-207ENST00000560492 HCLS1P14317 486 aaPredicted RBP13.78□□□□□ -0.2
CDC42BPB-207ENST00000560492 MAP2K2P36507 400 aa13.78□□□□□ -0.2
CDC42BPB-207ENST00000560492 TNIP1Q15025 636 aa13.78□□□□□ -0.2
CDC42BPB-207ENST00000560492 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
CDC42BPB-207ENST00000560492 ZNF428Q96B54 188 aa13.78□□□□□ -0.2
CDC42BPB-207ENST00000560492 VPS33BQ9H267 617 aa13.78□□□□□ -0.2
CDC42BPB-207ENST00000560492 TRMT112Q9UI30 125 aaKnown RBP13.77□□□□□ -0.21
CDC42BPB-207ENST00000560492 H7C1D1 291 aa13.76□□□□□ -0.21
CDC42BPB-207ENST00000560492 CA12O43570 354 aa13.76□□□□□ -0.21
CDC42BPB-207ENST00000560492 BBOX1O75936 387 aa13.76□□□□□ -0.21
CDC42BPB-207ENST00000560492 HSP90AB3PQ58FF7 597 aa13.76□□□□□ -0.21
CDC42BPB-207ENST00000560492 SAPCD2Q86UD0 394 aa13.76□□□□□ -0.21
CDC42BPB-207ENST00000560492 POLR2AP24928 1970 aaKnown RBP13.75□□□□□ -0.21
CDC42BPB-207ENST00000560492 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
CDC42BPB-207ENST00000560492 DGKZQ13574 1117 aa13.75□□□□□ -0.21
CDC42BPB-207ENST00000560492 PROSER3Q2NL68 480 aa13.75□□□□□ -0.21
CDC42BPB-207ENST00000560492 CDC37L1Q7L3B6 337 aa13.75□□□□□ -0.21
CDC42BPB-207ENST00000560492 SP8Q8IXZ3 490 aa13.75□□□□□ -0.21
CDC42BPB-207ENST00000560492 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
CDC42BPB-207ENST00000560492 PLEKHF1Q96S99 279 aa13.75□□□□□ -0.21
CDC42BPB-207ENST00000560492 CNOT7Q9UIV1 285 aaKnown RBP13.75□□□□□ -0.21
CDC42BPB-207ENST00000560492 CDHR2Q9BYE9 1310 aa13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 HUNKP57058 714 aa13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 RIPK4P57078 832 aa13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 GRAPQ13588 217 aa13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 COPS6Q7L5N1 327 aa13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 MICALL2Q8IY33 904 aa13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 GRAPLQ8TC17 118 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 XAGE3Q8WTP9 111 aa13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 RTFDC1Q9BY42 306 aaPredicted RBP13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 MCOLN1Q9GZU1 580 aa13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
CDC42BPB-207ENST00000560492 SH3TC1Q8TE82 1336 aa13.73□□□□□ -0.21
CDC42BPB-207ENST00000560492 AKAP11Q9UKA4 1901 aa13.73□□□□□ -0.21
CDC42BPB-207ENST00000560492 C6orf229H3BNL8 230 aa13.73□□□□□ -0.21
CDC42BPB-207ENST00000560492 RIMBP2O15034 1052 aa13.73□□□□□ -0.21
CDC42BPB-207ENST00000560492 BRPF1P55201 1214 aaPredicted RBP13.73□□□□□ -0.21
CDC42BPB-207ENST00000560492 SLC10A5Q5PT55 438 aa13.73□□□□□ -0.21
CDC42BPB-207ENST00000560492 RBM26Q5T8P6 1007 aaKnown RBP13.73□□□□□ -0.21
CDC42BPB-207ENST00000560492 NLRP10Q86W26 655 aa13.73□□□□□ -0.21
CDC42BPB-207ENST00000560492 ZC3H15Q8WU90 426 aaKnown RBP13.73□□□□□ -0.21
CDC42BPB-207ENST00000560492 DDX60Q8IY21 1712 aaKnown RBP13.73□□□□□ -0.21
CDC42BPB-207ENST00000560492 SHTN1A0MZ66 631 aa13.72□□□□□ -0.21
CDC42BPB-207ENST00000560492 G3V3G9 751 aa13.72□□□□□ -0.21
CDC42BPB-207ENST00000560492 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
CDC42BPB-207ENST00000560492 NOGQ13253 232 aa13.72□□□□□ -0.21
CDC42BPB-207ENST00000560492 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
CDC42BPB-207ENST00000560492 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
CDC42BPB-207ENST00000560492 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
CDC42BPB-207ENST00000560492 HHIPL1Q96JK4 782 aa13.72□□□□□ -0.21
CDC42BPB-207ENST00000560492 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
CDC42BPB-207ENST00000560492 NSFL1CQ9UNZ2 370 aaKnown RBP13.72□□□□□ -0.21
CDC42BPB-207ENST00000560492 LRRC37AA6NMS7 1700 aa13.71□□□□□ -0.21
CDC42BPB-207ENST00000560492 SLC34A2O95436 690 aa13.71□□□□□ -0.21
CDC42BPB-207ENST00000560492 HIRAP54198 1017 aaPredicted RBP13.71□□□□□ -0.21
CDC42BPB-207ENST00000560492 TCIRG1Q13488 830 aa13.71□□□□□ -0.21
CDC42BPB-207ENST00000560492 PDIA6Q15084 440 aa13.71□□□□□ -0.21
CDC42BPB-207ENST00000560492 WASHC4Q2M389 1173 aa13.71□□□□□ -0.21
CDC42BPB-207ENST00000560492 SAMD7Q7Z3H4 446 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms