RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 MAP3K15Q6ZN16 1313 aa12.32□□□□□ -0.44
SMAD3-215ENST00000560424 PRKAR2BP31323 418 aa12.31□□□□□ -0.44
SMAD3-215ENST00000560424 CNGB1Q14028 1251 aaPredicted RBP12.31□□□□□ -0.44
SMAD3-215ENST00000560424 SUSD4Q5VX71 490 aa12.31□□□□□ -0.44
SMAD3-215ENST00000560424 MCM10Q7L590 875 aa12.31□□□□□ -0.44
SMAD3-215ENST00000560424 ZBTB3Q9H5J0 574 aa12.31□□□□□ -0.44
SMAD3-215ENST00000560424 RRP7AQ9Y3A4 280 aaKnown RBP12.31□□□□□ -0.44
SMAD3-215ENST00000560424 NUP98P52948 1817 aa12.3□□□□□ -0.44
SMAD3-215ENST00000560424 SLC10A3P09131 477 aa12.3□□□□□ -0.44
SMAD3-215ENST00000560424 TBC1D10BQ4KMP7 808 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-215ENST00000560424 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
SMAD3-215ENST00000560424 SAMD7Q7Z3H4 446 aa12.3□□□□□ -0.44
SMAD3-215ENST00000560424 SLC51AQ86UW1 340 aa12.3□□□□□ -0.44
SMAD3-215ENST00000560424 SULF1Q8IWU6 871 aa12.3□□□□□ -0.44
SMAD3-215ENST00000560424 CSRNP1Q96S65 589 aa12.3□□□□□ -0.44
SMAD3-215ENST00000560424 RTFDC1Q9BY42 306 aaPredicted RBP12.3□□□□□ -0.44
SMAD3-215ENST00000560424 LAMB4A4D0S4 1761 aa12.29□□□□□ -0.44
SMAD3-215ENST00000560424 ADM5C9JUS6 153 aa12.29□□□□□ -0.44
SMAD3-215ENST00000560424 BBOX1O75936 387 aa12.29□□□□□ -0.44
SMAD3-215ENST00000560424 MYL6BP14649 208 aa12.29□□□□□ -0.44
SMAD3-215ENST00000560424 PARP10Q53GL7 1025 aa12.29□□□□□ -0.44
SMAD3-215ENST00000560424 HABP4Q5JVS0 413 aaKnown RBP12.29□□□□□ -0.44
SMAD3-215ENST00000560424 DLK2Q6UY11 383 aa12.29□□□□□ -0.44
SMAD3-215ENST00000560424 DPF2Q92785 391 aa12.29□□□□□ -0.44
SMAD3-215ENST00000560424 ZBTB12Q9Y330 459 aaPredicted RBP12.29□□□□□ -0.44
SMAD3-215ENST00000560424 ABCC4O15439 1325 aa12.29□□□□□ -0.44
SMAD3-215ENST00000560424 UBN2Q6ZU65 1347 aa12.29□□□□□ -0.44
SMAD3-215ENST00000560424 SHTN1A0MZ66 631 aa12.28□□□□□ -0.44
SMAD3-215ENST00000560424 NTSR2O95665 410 aa12.28□□□□□ -0.44
SMAD3-215ENST00000560424 DDX46Q7L014 1031 aaKnown RBP12.28□□□□□ -0.44
SMAD3-215ENST00000560424 SP8Q8IXZ3 490 aa12.28□□□□□ -0.44
SMAD3-215ENST00000560424 PHACTR3Q96KR7 559 aa12.28□□□□□ -0.44
SMAD3-215ENST00000560424 CFAP53Q96M91 514 aa12.28□□□□□ -0.44
SMAD3-215ENST00000560424 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
SMAD3-215ENST00000560424 TTLL7Q6ZT98 887 aa12.27□□□□□ -0.45
SMAD3-215ENST00000560424 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
SMAD3-215ENST00000560424 UTP14AQ9BVJ6 771 aaKnown RBP12.27□□□□□ -0.45
SMAD3-215ENST00000560424 PSMD14O00487 310 aa12.26□□□□□ -0.45
SMAD3-215ENST00000560424 RPS12P25398 132 aaKnown RBP12.26□□□□□ -0.45
SMAD3-215ENST00000560424 DCTN1Q14203 1278 aa12.26□□□□□ -0.45
SMAD3-215ENST00000560424 TAF7Q15545 349 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-215ENST00000560424 WASHC4Q2M389 1173 aa12.26□□□□□ -0.45
SMAD3-215ENST00000560424 FBXO46Q6PJ61 603 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-215ENST00000560424 GIGYF2Q6Y7W6 1299 aaKnown RBP12.26□□□□□ -0.45
SMAD3-215ENST00000560424 ZNF34Q8IZ26 560 aa12.26□□□□□ -0.45
SMAD3-215ENST00000560424 ZNF296Q8WUU4 475 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-215ENST00000560424 COL3A1P02461 1466 aaPredicted RBP12.26□□□□□ -0.45
SMAD3-215ENST00000560424 YDJCA8MPS7 323 aa12.25□□□□□ -0.45
SMAD3-215ENST00000560424 HTATSF1O43719 755 aaKnown RBP12.25□□□□□ -0.45
SMAD3-215ENST00000560424 TBC1D8O95759 1140 aa12.25□□□□□ -0.45
SMAD3-215ENST00000560424 DDX10Q13206 875 aaKnown RBP12.25□□□□□ -0.45
SMAD3-215ENST00000560424 KIF4BQ2VIQ3 1234 aa12.25□□□□□ -0.45
SMAD3-215ENST00000560424 TMC4Q7Z404 712 aa12.25□□□□□ -0.45
SMAD3-215ENST00000560424 RASAL3Q86YV0 1011 aa12.25□□□□□ -0.45
SMAD3-215ENST00000560424 PNISRQ8TF01 805 aaKnown RBP12.25□□□□□ -0.45
SMAD3-215ENST00000560424 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
SMAD3-215ENST00000560424 DBNDD1Q9H9R9 158 aa12.25□□□□□ -0.45
SMAD3-215ENST00000560424 GGA3Q9NZ52 723 aa12.25□□□□□ -0.45
SMAD3-215ENST00000560424 G3V3G9 751 aa12.24□□□□□ -0.45
SMAD3-215ENST00000560424 RIMBP2O15034 1052 aa12.24□□□□□ -0.45
SMAD3-215ENST00000560424 NEFMP07197 916 aa12.24□□□□□ -0.45
SMAD3-215ENST00000560424 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-215ENST00000560424 POLR2AP24928 1970 aaKnown RBP12.24□□□□□ -0.45
SMAD3-215ENST00000560424 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
SMAD3-215ENST00000560424 GRAPQ13588 217 aa12.24□□□□□ -0.45
SMAD3-215ENST00000560424 DCAF8Q5TAQ9 597 aa12.24□□□□□ -0.45
SMAD3-215ENST00000560424 GRAPLQ8TC17 118 aaPredicted RBP12.24□□□□□ -0.45
SMAD3-215ENST00000560424 CDCA5Q96FF9 252 aa12.24□□□□□ -0.45
SMAD3-215ENST00000560424 MIS18AQ9NYP9 233 aa12.24□□□□□ -0.45
SMAD3-215ENST00000560424 C6orf229H3BNL8 230 aa12.23□□□□□ -0.45
SMAD3-215ENST00000560424 EGFRP00533 1210 aa12.23□□□□□ -0.45
SMAD3-215ENST00000560424 FKBP1BP68106 108 aa12.23□□□□□ -0.45
SMAD3-215ENST00000560424 SLC10A5Q5PT55 438 aa12.23□□□□□ -0.45
SMAD3-215ENST00000560424 EYA3Q99504 573 aa12.23□□□□□ -0.45
SMAD3-215ENST00000560424 NSFL1CQ9UNZ2 370 aaKnown RBP12.23□□□□□ -0.45
SMAD3-215ENST00000560424 GPR25O00155 361 aa12.22□□□□□ -0.45
SMAD3-215ENST00000560424 ECE2O60344 883 aa12.22□□□□□ -0.45
SMAD3-215ENST00000560424 HCLS1P14317 486 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-215ENST00000560424 TTLL12Q14166 644 aaPredicted RBP12.22□□□□□ -0.45
SMAD3-215ENST00000560424 ERBB4Q15303 1308 aa12.21□□□□□ -0.45
SMAD3-215ENST00000560424 SREBF2Q12772 1141 aa12.21□□□□□ -0.45
SMAD3-215ENST00000560424 HSP90AB3PQ58FF7 597 aa12.21□□□□□ -0.45
SMAD3-215ENST00000560424 PAPPA2Q9BXP8 1791 aa12.2□□□□□ -0.46
SMAD3-215ENST00000560424 FKTNO75072 461 aa12.2□□□□□ -0.46
SMAD3-215ENST00000560424 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
SMAD3-215ENST00000560424 ANGEL2Q5VTE6 544 aaKnown RBP12.2□□□□□ -0.46
SMAD3-215ENST00000560424 INTS3Q68E01 1043 aaKnown RBP12.2□□□□□ -0.46
SMAD3-215ENST00000560424 TRMT112Q9UI30 125 aaKnown RBP12.2□□□□□ -0.46
SMAD3-215ENST00000560424 ANKRD36CQ5JPF3 1778 aa12.2□□□□□ -0.46
SMAD3-215ENST00000560424 DDX60Q8IY21 1712 aaKnown RBP12.2□□□□□ -0.46
SMAD3-215ENST00000560424 SH3TC1Q8TE82 1336 aa12.19□□□□□ -0.46
SMAD3-215ENST00000560424 PER1O15534 1290 aaPredicted RBP12.19□□□□□ -0.46
SMAD3-215ENST00000560424 NF2P35240 595 aa12.19□□□□□ -0.46
SMAD3-215ENST00000560424 EIF4A1P60842 406 aaKnown RBP12.19□□□□□ -0.46
SMAD3-215ENST00000560424 SCARF1Q14162 830 aa12.19□□□□□ -0.46
SMAD3-215ENST00000560424 NOM1Q5C9Z4 860 aaKnown RBP12.19□□□□□ -0.46
SMAD3-215ENST00000560424 LAMB2P55268 1798 aa12.19□□□□□ -0.46
SMAD3-215ENST00000560424 DUOX1Q9NRD9 1551 aa12.18□□□□□ -0.46
SMAD3-215ENST00000560424 FXR1P51114 621 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMAD3-215ENST00000560424 MKRN3Q13064 507 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms