RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 ICMTO60725 284 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 MSX1P28360 303 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 MAPK1P28482 360 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 ATP1A2P50993 1020 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 GLYCTKQ8IVS8 523 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 ABHD17AQ96GS6 310 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 PRIMPOLQ96LW4 560 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 CXXC1Q9P0U4 656 aaPredicted RBP8.63□□□□□ -1.03
USP8-210ENST00000560379 BCCIPQ9P287 314 aaKnown RBP eCLIP8.63□□□□□ -1.03
USP8-210ENST00000560379 TTC37Q6PGP7 1564 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 TSPOAP1O95153 1857 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 MAP3K1Q13233 1512 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 TROQ12816 1431 aaPredicted RBP8.63□□□□□ -1.03
USP8-210ENST00000560379 K7ELQ4 463 aaPredicted RBP8.62□□□□□ -1.03
USP8-210ENST00000560379 CTBSQ01459 385 aa8.62□□□□□ -1.03
USP8-210ENST00000560379 OCLNQ16625 522 aa8.62□□□□□ -1.03
USP8-210ENST00000560379 LARGE2Q8N3Y3 721 aa8.62□□□□□ -1.03
USP8-210ENST00000560379 ASB16Q96NS5 453 aa8.62□□□□□ -1.03
USP8-210ENST00000560379 ETNK1Q9HBU6 452 aa8.62□□□□□ -1.03
USP8-210ENST00000560379 CWC22Q9HCG8 908 aaKnown RBP8.62□□□□□ -1.03
USP8-210ENST00000560379 MKL2Q9ULH7 1088 aa8.62□□□□□ -1.03
USP8-210ENST00000560379 NOD1Q9Y239 953 aa8.62□□□□□ -1.03
USP8-210ENST00000560379 TIAM1Q13009 1591 aa8.61□□□□□ -1.03
USP8-210ENST00000560379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.61□□□□□ -1.03
USP8-210ENST00000560379 BNIP3LO60238 219 aa8.61□□□□□ -1.03
USP8-210ENST00000560379 DKK1O94907 266 aa8.61□□□□□ -1.03
USP8-210ENST00000560379 GDF2Q9UK05 429 aaPredicted RBP8.61□□□□□ -1.03
USP8-210ENST00000560379 KIAA1024Q9UPX6 916 aa8.61□□□□□ -1.03
USP8-210ENST00000560379 KDM6BO15054 1643 aa8.61□□□□□ -1.03
USP8-210ENST00000560379 PREX2Q70Z35 1606 aa8.61□□□□□ -1.03
USP8-210ENST00000560379 CANXP27824 592 aaKnown RBP8.6□□□□□ -1.03
USP8-210ENST00000560379 SEC13P55735 322 aa8.6□□□□□ -1.03
USP8-210ENST00000560379 LBRQ14739 615 aaKnown RBP8.6□□□□□ -1.03
USP8-210ENST00000560379 NAALADL2Q58DX5 795 aa8.6□□□□□ -1.03
USP8-210ENST00000560379 SLCO4C1Q6ZQN7 724 aa8.6□□□□□ -1.03
USP8-210ENST00000560379 SIX5Q8N196 739 aa8.6□□□□□ -1.03
USP8-210ENST00000560379 PPP1R1BQ9UD71 204 aaPredicted RBP8.6□□□□□ -1.03
USP8-210ENST00000560379 DCTN4Q9UJW0 460 aa8.6□□□□□ -1.03
USP8-210ENST00000560379 GGA1Q9UJY5 639 aa8.6□□□□□ -1.03
USP8-210ENST00000560379 ATXN7L1Q9ULK2 861 aaPredicted RBP8.6□□□□□ -1.03
USP8-210ENST00000560379 PHF24Q9UPV7 400 aa8.6□□□□□ -1.03
USP8-210ENST00000560379 ITSN2Q9NZM3 1697 aa8.59□□□□□ -1.03
USP8-210ENST00000560379 NEO1Q92859 1461 aa8.59□□□□□ -1.03
USP8-210ENST00000560379 ZBTB7BO15156 539 aaPredicted RBP8.59□□□□□ -1.03
USP8-210ENST00000560379 C21orf2O43822 256 aa8.59□□□□□ -1.03
USP8-210ENST00000560379 FURINP09958 794 aa8.59□□□□□ -1.03
USP8-210ENST00000560379 TSNAXIP1Q2TAA8 658 aa8.59□□□□□ -1.03
USP8-210ENST00000560379 TMEM214Q6NUQ4 689 aaKnown RBP8.59□□□□□ -1.03
USP8-210ENST00000560379 ZSCAN29Q8IWY8 852 aaPredicted RBP8.59□□□□□ -1.03
USP8-210ENST00000560379 GOLGA6L1Q8N7Z2 621 aa8.59□□□□□ -1.03
USP8-210ENST00000560379 CRISPLD1Q9H336 500 aa8.59□□□□□ -1.03
USP8-210ENST00000560379 CD109Q6YHK3 1445 aa8.59□□□□□ -1.03
USP8-210ENST00000560379 SUPT6HQ7KZ85 1726 aaKnown RBP8.58□□□□□ -1.04
USP8-210ENST00000560379 PLEKHD1A6NEE1 506 aa8.58□□□□□ -1.04
USP8-210ENST00000560379 SMARCA5O60264 1052 aaPredicted RBP8.58□□□□□ -1.04
USP8-210ENST00000560379 MYCP01106 439 aaPredicted RBP8.58□□□□□ -1.04
USP8-210ENST00000560379 BMP4P12644 408 aa8.58□□□□□ -1.04
USP8-210ENST00000560379 ATP4AP20648 1035 aa8.58□□□□□ -1.04
USP8-210ENST00000560379 FGFR3P22607 806 aa8.58□□□□□ -1.04
USP8-210ENST00000560379 ECM1Q16610 540 aa8.58□□□□□ -1.04
USP8-210ENST00000560379 GNASQ5JWF2 1037 aa8.58□□□□□ -1.04
USP8-210ENST00000560379 PPARGC1BQ86YN6 1023 aaKnown RBP8.58□□□□□ -1.04
USP8-210ENST00000560379 GTF3C2Q8WUA4 911 aaPredicted RBP8.58□□□□□ -1.04
USP8-210ENST00000560379 UBXN4Q92575 508 aa8.58□□□□□ -1.04
USP8-210ENST00000560379 BCL11AQ9H165 835 aa8.58□□□□□ -1.04
USP8-210ENST00000560379 RRAGCQ9HB90 399 aa8.58□□□□□ -1.04
USP8-210ENST00000560379 RBM19Q9Y4C8 960 aaKnown RBP8.58□□□□□ -1.04
USP8-210ENST00000560379 PHLDB1Q86UU1 1377 aa8.58□□□□□ -1.04
USP8-210ENST00000560379 CDC42BPAQ5VT25 1732 aa8.57□□□□□ -1.04
USP8-210ENST00000560379 ITGB7P26010 798 aa8.57□□□□□ -1.04
USP8-210ENST00000560379 DGKGP49619 791 aa8.57□□□□□ -1.04
USP8-210ENST00000560379 SCNN1DP51172 638 aa8.57□□□□□ -1.04
USP8-210ENST00000560379 GRIN2CQ14957 1233 aa8.57□□□□□ -1.04
USP8-210ENST00000560379 RHBDD1Q8TEB9 315 aa8.57□□□□□ -1.04
USP8-210ENST00000560379 ESF1Q9H501 851 aaKnown RBP8.57□□□□□ -1.04
USP8-210ENST00000560379 SFI1A8K8P3 1242 aa8.56□□□□□ -1.04
USP8-210ENST00000560379 EPXP11678 715 aa8.56□□□□□ -1.04
USP8-210ENST00000560379 GTF2IP78347 998 aa8.56□□□□□ -1.04
USP8-210ENST00000560379 COL19A1Q14993 1142 aa8.56□□□□□ -1.04
USP8-210ENST00000560379 SF3A1Q15459 793 aaKnown RBP8.56□□□□□ -1.04
USP8-210ENST00000560379 EAPPQ56P03 285 aaPredicted RBP8.56□□□□□ -1.04
USP8-210ENST00000560379 CCDC102BQ68D86 513 aa8.56□□□□□ -1.04
USP8-210ENST00000560379 ZNF295-AS1Q8N0V1 137 aa8.56□□□□□ -1.04
USP8-210ENST00000560379 SPATA32Q96LK8 384 aa8.56□□□□□ -1.04
USP8-210ENST00000560379 SEPT3Q9UH03 358 aa8.56□□□□□ -1.04
USP8-210ENST00000560379 KLF15Q9UIH9 416 aa8.56□□□□□ -1.04
USP8-210ENST00000560379 DOLKQ9UPQ8 538 aa8.56□□□□□ -1.04
USP8-210ENST00000560379 CDC42BPBQ9Y5S2 1711 aa8.55□□□□□ -1.04
USP8-210ENST00000560379 C1QTNF9BB2RNN3 333 aa8.55□□□□□ -1.04
USP8-210ENST00000560379 LGR5O75473 907 aa8.55□□□□□ -1.04
USP8-210ENST00000560379 ERCC5P28715 1186 aaPredicted RBP8.55□□□□□ -1.04
USP8-210ENST00000560379 ARHGAP4P98171 946 aa8.55□□□□□ -1.04
USP8-210ENST00000560379 FKBP4Q02790 459 aaKnown RBP eCLIP8.55□□□□□ -1.04
USP8-210ENST00000560379 TLR1Q15399 786 aa8.55□□□□□ -1.04
USP8-210ENST00000560379 OXLD1Q5BKU9 147 aa8.55□□□□□ -1.04
USP8-210ENST00000560379 EFHC2Q5JST6 749 aa8.55□□□□□ -1.04
USP8-210ENST00000560379 ALYREFQ86V81 257 aaKnown RBP8.55□□□□□ -1.04
USP8-210ENST00000560379 TICAM2Q86XR7 235 aa8.55□□□□□ -1.04
USP8-210ENST00000560379 CERS3Q8IU89 383 aa8.55□□□□□ -1.04
USP8-210ENST00000560379 PGBD3Q8N328 593 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms