RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PRKCSHP14314 528 aaPredicted RBP15.51■□□□□ 0.07
TRAF3-208ENST00000560371 PYM1Q9BRP8 204 aaKnown RBP15.51■□□□□ 0.07
TRAF3-208ENST00000560371 BMP2KLQ5H9B9 411 aa15.51■□□□□ 0.07
TRAF3-208ENST00000560371 FSIP1Q8NA03 581 aa15.51■□□□□ 0.07
TRAF3-208ENST00000560371 EIF3JO75822 258 aaKnown RBP15.51■□□□□ 0.07
TRAF3-208ENST00000560371 DCAF5Q96JK2 942 aa15.51■□□□□ 0.07
TRAF3-208ENST00000560371 PBRM1Q86U86 1689 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 LEKR1Q6ZMV7 388 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 VTI1AQ96AJ9 217 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 TRPM2O94759 1503 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 TFIP11Q9UBB9 837 aaKnown RBP15.5■□□□□ 0.07
TRAF3-208ENST00000560371 ZBTB43O43298 467 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 ALDH1L1O75891 902 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 TOP1P11387 765 aaKnown RBP15.5■□□□□ 0.07
TRAF3-208ENST00000560371 MTIF2P46199 727 aaKnown RBP15.5■□□□□ 0.07
TRAF3-208ENST00000560371 SLC9C2Q5TAH2 1124 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 ARHGAP45Q92619 1136 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 KCNA6P17658 529 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 GNAQP50148 359 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 KIAA0556O60303 1618 aa15.5■□□□□ 0.07
TRAF3-208ENST00000560371 PLS1Q14651 629 aa15.49■□□□□ 0.07
TRAF3-208ENST00000560371 TDRD12Q587J7 1177 aaKnown RBP15.49■□□□□ 0.07
TRAF3-208ENST00000560371 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.49■□□□□ 0.07
TRAF3-208ENST00000560371 NPATQ14207 1427 aa15.49■□□□□ 0.07
TRAF3-208ENST00000560371 RBM26Q5T8P6 1007 aaKnown RBP15.49■□□□□ 0.07
TRAF3-208ENST00000560371 PLCG2P16885 1265 aa15.49■□□□□ 0.07
TRAF3-208ENST00000560371 GJB2P29033 226 aa15.49■□□□□ 0.07
TRAF3-208ENST00000560371 USP8P40818 1118 aa15.49■□□□□ 0.07
TRAF3-208ENST00000560371 RAB11FIP4Q86YS3 637 aa15.49■□□□□ 0.07
TRAF3-208ENST00000560371 NUP88Q99567 741 aaPredicted RBP15.49■□□□□ 0.07
TRAF3-208ENST00000560371 NUP153P49790 1475 aaKnown RBP15.49■□□□□ 0.07
TRAF3-208ENST00000560371 TRAPPC3LQ5T215 181 aa15.49■□□□□ 0.07
TRAF3-208ENST00000560371 POLKQ9UBT6 870 aa15.49■□□□□ 0.07
TRAF3-208ENST00000560371 TRAPPC8Q9Y2L5 1435 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 MCMDC2Q4G0Z9 681 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 KANK3Q6NY19 840 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 FERMT2Q96AC1 680 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 PCDH11XQ9BZA7 1347 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 PCDH11YQ9BZA8 1340 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 MACROD2A1Z1Q3 448 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 ZRANB1Q9UGI0 708 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 GNPATO15228 680 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 STX6O43752 255 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 LINS1Q8NG48 757 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 ERMNQ8TAM6 284 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 IRS4O14654 1257 aaPredicted RBP15.48■□□□□ 0.07
TRAF3-208ENST00000560371 TTC22Q5TAA0 569 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 BICD1Q96G01 975 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 PANK2Q9BZ23 570 aa15.48■□□□□ 0.07
TRAF3-208ENST00000560371 RTN1Q16799 776 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 CCDC40Q4G0X9 1142 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 FAM193AP78312 1265 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 CCDC174Q6PII3 467 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 KLF18A0A0U1RQI7 1052 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 B4DLN1 442 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 LMOD1P29536 600 aaPredicted RBP15.47■□□□□ 0.07
TRAF3-208ENST00000560371 MRPL12P52815 198 aaKnown RBP15.47■□□□□ 0.07
TRAF3-208ENST00000560371 TAF3Q5VWG9 929 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 EYA3Q99504 573 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 LRRC27Q9C0I9 530 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 MAGEB6P1A0A0J9YX57 407 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 KIF5CO60282 957 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 PPFIA3O75145 1194 aa15.47■□□□□ 0.07
TRAF3-208ENST00000560371 MTHFSDQ2M296 383 aaKnown RBP15.47■□□□□ 0.07
TRAF3-208ENST00000560371 RBM25P49756 843 aaKnown RBP15.46■□□□□ 0.07
TRAF3-208ENST00000560371 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
TRAF3-208ENST00000560371 MAP3K5Q99683 1374 aa15.46■□□□□ 0.07
TRAF3-208ENST00000560371 USO1O60763 962 aaKnown RBP15.46■□□□□ 0.07
TRAF3-208ENST00000560371 CTNNA2P26232 953 aa15.46■□□□□ 0.07
TRAF3-208ENST00000560371 HEATR3Q7Z4Q2 680 aa15.46■□□□□ 0.07
TRAF3-208ENST00000560371 ZSCAN12O43309 604 aa15.46■□□□□ 0.07
TRAF3-208ENST00000560371 NUP160Q12769 1436 aa15.46■□□□□ 0.07
TRAF3-208ENST00000560371 RIMBP2O15034 1052 aa15.46■□□□□ 0.07
TRAF3-208ENST00000560371 TBCAO75347 108 aaKnown RBP15.46■□□□□ 0.07
TRAF3-208ENST00000560371 CTNNBL1Q8WYA6 563 aaPredicted RBP15.46■□□□□ 0.07
TRAF3-208ENST00000560371 UHRF1BP1Q6BDS2 1440 aa15.46■□□□□ 0.07
TRAF3-208ENST00000560371 IP6K1Q92551 441 aa15.46■□□□□ 0.06
TRAF3-208ENST00000560371 PAG1Q9NWQ8 432 aa15.45■□□□□ 0.06
TRAF3-208ENST00000560371 PUF60Q9UHX1 559 aaKnown RBP15.45■□□□□ 0.06
TRAF3-208ENST00000560371 ZSCAN16Q9H4T2 348 aaPredicted RBP15.45■□□□□ 0.06
TRAF3-208ENST00000560371 GSTTP1A0A1W2PQM5 241 aa15.45■□□□□ 0.06
TRAF3-208ENST00000560371 ANKRD2Q9GZV1 360 aa15.45■□□□□ 0.06
TRAF3-208ENST00000560371 PRAG1Q86YV5 1406 aa15.45■□□□□ 0.06
TRAF3-208ENST00000560371 BIN1O00499 593 aa15.45■□□□□ 0.06
TRAF3-208ENST00000560371 LDHBP07195 334 aaKnown RBP15.45■□□□□ 0.06
TRAF3-208ENST00000560371 DDX19AQ9NUU7 478 aaKnown RBP15.45■□□□□ 0.06
TRAF3-208ENST00000560371 MCM9Q9NXL9 1143 aa15.45■□□□□ 0.06
TRAF3-208ENST00000560371 GNAT2P19087 354 aa15.45■□□□□ 0.06
TRAF3-208ENST00000560371 CCDC102BQ68D86 513 aa15.45■□□□□ 0.06
TRAF3-208ENST00000560371 HELBQ8NG08 1087 aaPredicted RBP15.45■□□□□ 0.06
TRAF3-208ENST00000560371 CDCA7Q9BWT1 371 aaPredicted RBP15.45■□□□□ 0.06
TRAF3-208ENST00000560371 TBX22Q9Y458 520 aa15.45■□□□□ 0.06
TRAF3-208ENST00000560371 FAM114A1Q8IWE2 563 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 ADAMTS12P58397 1594 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 UBXN4Q92575 508 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 SPDYE3A6NKU9 549 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 HOOK3Q86VS8 718 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 PRC1O43663 620 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 SDSP20132 328 aa15.44■□□□□ 0.06
TRAF3-208ENST00000560371 ALG1Q9BT22 464 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 878.9 ms