RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 ERC1Q8IUD2 1116 aa25.77■■□□□ 1.72
PSMA4-215ENST00000559934 ZNF215Q9UL58 517 aaPredicted RBP25.77■■□□□ 1.72
PSMA4-215ENST00000559934 TSPOAP1O95153 1857 aa25.77■■□□□ 1.72
PSMA4-215ENST00000559934 GOLGA6L19H0YKK7 550 aa25.76■■□□□ 1.71
PSMA4-215ENST00000559934 USP16Q9Y5T5 823 aa25.76■■□□□ 1.71
PSMA4-215ENST00000559934 DIP2BQ9P265 1576 aa25.76■■□□□ 1.71
PSMA4-215ENST00000559934 CEMIPQ8WUJ3 1361 aa25.75■■□□□ 1.71
PSMA4-215ENST00000559934 LTKP29376 864 aa25.75■■□□□ 1.71
PSMA4-215ENST00000559934 PROSER3Q2NL68 480 aa25.75■■□□□ 1.71
PSMA4-215ENST00000559934 MORC2Q9Y6X9 1032 aaPredicted RBP25.75■■□□□ 1.71
PSMA4-215ENST00000559934 HIP1O00291 1037 aa25.75■■□□□ 1.71
PSMA4-215ENST00000559934 KMT5BQ4FZB7 885 aa25.75■■□□□ 1.71
PSMA4-215ENST00000559934 EDC3Q96F86 508 aaKnown RBP25.75■■□□□ 1.71
PSMA4-215ENST00000559934 TRMT1Q9NXH9 659 aaKnown RBP25.75■■□□□ 1.71
PSMA4-215ENST00000559934 SLFN14P0C7P3 912 aa25.74■■□□□ 1.71
PSMA4-215ENST00000559934 FOSBP53539 338 aa25.74■■□□□ 1.71
PSMA4-215ENST00000559934 FTOQ9C0B1 505 aaKnown RBP eCLIP25.74■■□□□ 1.71
PSMA4-215ENST00000559934 SIL1Q9H173 461 aa25.74■■□□□ 1.71
PSMA4-215ENST00000559934 SNRKQ9NRH2 765 aa25.74■■□□□ 1.71
PSMA4-215ENST00000559934 MED23Q9ULK4 1368 aa25.74■■□□□ 1.71
PSMA4-215ENST00000559934 SKILP12757 684 aa25.74■■□□□ 1.71
PSMA4-215ENST00000559934 GABPB1Q06547 395 aaPredicted RBP25.74■■□□□ 1.71
PSMA4-215ENST00000559934 ESF1Q9H501 851 aaKnown RBP25.74■■□□□ 1.71
PSMA4-215ENST00000559934 FAM69CQ0P6D2 419 aa25.73■■□□□ 1.71
PSMA4-215ENST00000559934 FILIP1Q7Z7B0 1213 aa25.73■■□□□ 1.71
PSMA4-215ENST00000559934 GTF3C6Q969F1 213 aa25.73■■□□□ 1.71
PSMA4-215ENST00000559934 PTPN14Q15678 1187 aa25.72■■□□□ 1.71
PSMA4-215ENST00000559934 NYAP1Q6ZVC0 841 aa25.72■■□□□ 1.71
PSMA4-215ENST00000559934 SUCLG2Q96I99 432 aa25.72■■□□□ 1.71
PSMA4-215ENST00000559934 ALDH8A1Q9H2A2 487 aaPredicted RBP25.72■■□□□ 1.71
PSMA4-215ENST00000559934 H3BQV1 296 aa25.72■■□□□ 1.71
PSMA4-215ENST00000559934 RBM6P78332 1123 aaKnown RBP25.72■■□□□ 1.71
PSMA4-215ENST00000559934 IFFO2Q5TF58 517 aa25.72■■□□□ 1.71
PSMA4-215ENST00000559934 SARM1Q6SZW1 724 aa25.72■■□□□ 1.71
PSMA4-215ENST00000559934 KAZALD1Q96I82 304 aa25.72■■□□□ 1.71
PSMA4-215ENST00000559934 TNRQ92752 1358 aa25.72■■□□□ 1.71
PSMA4-215ENST00000559934 CCDC69A6NI79 296 aa25.71■■□□□ 1.71
PSMA4-215ENST00000559934 MRFAP1L1Q96HT8 127 aa25.71■■□□□ 1.71
PSMA4-215ENST00000559934 GOLPH3LQ9H4A5 285 aa25.71■■□□□ 1.71
PSMA4-215ENST00000559934 HOXB7P09629 217 aa25.71■■□□□ 1.71
PSMA4-215ENST00000559934 CCZ1BP86790 482 aa25.71■■□□□ 1.71
PSMA4-215ENST00000559934 CCZ1P86791 482 aaPredicted RBP25.71■■□□□ 1.71
PSMA4-215ENST00000559934 G3BP1Q13283 466 aaKnown RBP eCLIP25.71■■□□□ 1.712e-6■■■□□ 18
PSMA4-215ENST00000559934 KLHDC4Q8TBB5 520 aa25.71■■□□□ 1.71
PSMA4-215ENST00000559934 BICC1Q9H694 974 aaKnown RBP25.71■■□□□ 1.71
PSMA4-215ENST00000559934 KDM3BQ7LBC6 1761 aa25.7■■□□□ 1.71
PSMA4-215ENST00000559934 UBR1Q8IWV7 1749 aa25.7■■□□□ 1.71
PSMA4-215ENST00000559934 GIGYF1O75420 1035 aaPredicted RBP25.7■■□□□ 1.7
PSMA4-215ENST00000559934 ZNF397Q8NF99 534 aaPredicted RBP25.7■■□□□ 1.7
PSMA4-215ENST00000559934 SETD1BQ9UPS6 1966 aaKnown RBP25.7■■□□□ 1.7
PSMA4-215ENST00000559934 HSP90B1P14625 803 aaKnown RBP25.7■■□□□ 1.7
PSMA4-215ENST00000559934 ELF2Q15723 593 aa25.7■■□□□ 1.7
PSMA4-215ENST00000559934 ERCC4Q92889 916 aaPredicted RBP25.7■■□□□ 1.7
PSMA4-215ENST00000559934 LRRC2Q9BYS8 371 aa25.7■■□□□ 1.7
PSMA4-215ENST00000559934 COL15A1P39059 1388 aa25.69■■□□□ 1.7
PSMA4-215ENST00000559934 BTBD11A6QL63 1104 aa25.69■■□□□ 1.7
PSMA4-215ENST00000559934 TAF5LO75529 589 aa25.69■■□□□ 1.7
PSMA4-215ENST00000559934 CHGBP05060 677 aa25.69■■□□□ 1.7
PSMA4-215ENST00000559934 STX1AQ16623 288 aa25.69■■□□□ 1.7
PSMA4-215ENST00000559934 CCAR1Q8IX12 1150 aaKnown RBP25.69■■□□□ 1.7
PSMA4-215ENST00000559934 FBXW7Q969H0 707 aa25.69■■□□□ 1.7
PSMA4-215ENST00000559934 ALDH1L1O75891 902 aa25.69■■□□□ 1.7
PSMA4-215ENST00000559934 FBXO38Q6PIJ6 1188 aa25.69■■□□□ 1.7
PSMA4-215ENST00000559934 AMOTL2Q9Y2J4 779 aa25.69■■□□□ 1.7
PSMA4-215ENST00000559934 ERBB3P21860 1342 aa25.69■■□□□ 1.7
PSMA4-215ENST00000559934 MARF1Q9Y4F3 1742 aaKnown RBP25.68■■□□□ 1.7
PSMA4-215ENST00000559934 CAVIN2O95810 425 aa25.68■■□□□ 1.7
PSMA4-215ENST00000559934 Q6ZUG5 572 aa25.68■■□□□ 1.7
PSMA4-215ENST00000559934 DHX40Q8IX18 779 aaKnown RBP25.68■■□□□ 1.7
PSMA4-215ENST00000559934 DBF4Q9UBU7 674 aaPredicted RBP25.68■■□□□ 1.7
PSMA4-215ENST00000559934 MED1Q15648 1581 aaPredicted RBP25.68■■□□□ 1.7
PSMA4-215ENST00000559934 PRAMEF22A3QJZ6 481 aa25.68■■□□□ 1.7
PSMA4-215ENST00000559934 HMG20BQ9P0W2 317 aa25.68■■□□□ 1.7
PSMA4-215ENST00000559934 BECN2A8MW95 431 aa25.67■■□□□ 1.7
PSMA4-215ENST00000559934 ADD1P35611 737 aaKnown RBP25.67■■□□□ 1.7
PSMA4-215ENST00000559934 KRT222Q8N1A0 295 aa25.67■■□□□ 1.7
PSMA4-215ENST00000559934 NDUFB9Q9Y6M9 179 aa25.67■■□□□ 1.7
PSMA4-215ENST00000559934 TEFQ10587 303 aa25.67■■□□□ 1.7
PSMA4-215ENST00000559934 MPRIPQ6WCQ1 1025 aa25.67■■□□□ 1.7
PSMA4-215ENST00000559934 CFAP45Q9UL16 551 aa25.67■■□□□ 1.7
PSMA4-215ENST00000559934 JCADQ9P266 1359 aa25.67■■□□□ 1.7
PSMA4-215ENST00000559934 NPHP1O15259 732 aa25.66■■□□□ 1.7
PSMA4-215ENST00000559934 TSGA10IPQ3SY00 556 aa25.66■■□□□ 1.7
PSMA4-215ENST00000559934 KSR2Q6VAB6 950 aa25.66■■□□□ 1.7
PSMA4-215ENST00000559934 ABTB2Q8N961 1025 aa25.66■■□□□ 1.7
PSMA4-215ENST00000559934 NEMFO60524 1076 aa25.66■■□□□ 1.7
PSMA4-215ENST00000559934 TERF2Q15554 542 aa25.66■■□□□ 1.7
PSMA4-215ENST00000559934 CCDC129Q6ZRS4 1044 aa25.66■■□□□ 1.7
PSMA4-215ENST00000559934 CCAR2Q8N163 923 aaKnown RBP25.66■■□□□ 1.7
PSMA4-215ENST00000559934 NEK1Q96PY6 1258 aa25.66■■□□□ 1.7
PSMA4-215ENST00000559934 NBPF6Q5VWK0 638 aa25.65■■□□□ 1.7
PSMA4-215ENST00000559934 C14orf37Q86TY3 774 aa25.65■■□□□ 1.7
PSMA4-215ENST00000559934 NBPF4Q96M43 638 aa25.65■■□□□ 1.7
PSMA4-215ENST00000559934 ST7Q9NRC1 585 aa25.65■■□□□ 1.7
PSMA4-215ENST00000559934 DIP2AQ14689 1571 aa25.65■■□□□ 1.7
PSMA4-215ENST00000559934 PPFIA3O75145 1194 aa25.65■■□□□ 1.7
PSMA4-215ENST00000559934 SCRN1Q12765 414 aa25.65■■□□□ 1.7
PSMA4-215ENST00000559934 ZSCAN16Q9H4T2 348 aaPredicted RBP25.65■■□□□ 1.7
PSMA4-215ENST00000559934 GRM8O00222 908 aa25.65■■□□□ 1.7
PSMA4-215ENST00000559934 SNW1Q13573 536 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms