RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 C1QTNF9BB2RNN3 333 aa8.18□□□□□ -1.1
CTDSPL2-207ENST00000559738 ZBTB39O15060 712 aa8.18□□□□□ -1.1
CTDSPL2-207ENST00000559738 BRD2P25440 801 aaKnown RBP8.18□□□□□ -1.1
CTDSPL2-207ENST00000559738 CHRNA4P43681 627 aa8.18□□□□□ -1.1
CTDSPL2-207ENST00000559738 CD163Q86VB7 1156 aa8.18□□□□□ -1.1
CTDSPL2-207ENST00000559738 MICALL1Q8N3F8 863 aa8.18□□□□□ -1.1
CTDSPL2-207ENST00000559738 RTCBQ9Y3I0 505 aaKnown RBP8.18□□□□□ -1.1
CTDSPL2-207ENST00000559738 RGL4Q8IZJ4 473 aa8.17□□□□□ -1.1
CTDSPL2-207ENST00000559738 EFCC1Q9HA90 598 aa8.17□□□□□ -1.1
CTDSPL2-207ENST00000559738 PRDM6Q9NQX0 595 aa8.17□□□□□ -1.1
CTDSPL2-207ENST00000559738 SLC6A14Q9UN76 642 aa8.17□□□□□ -1.1
CTDSPL2-207ENST00000559738 SPDYE3A6NKU9 549 aa8.16□□□□□ -1.1
CTDSPL2-207ENST00000559738 SPATA31C1P0DKV0 1188 aa8.16□□□□□ -1.1
CTDSPL2-207ENST00000559738 COL9A3Q14050 684 aaPredicted RBP8.16□□□□□ -1.1
CTDSPL2-207ENST00000559738 C20orf204Q6ZNR8 217 aa8.16□□□□□ -1.1
CTDSPL2-207ENST00000559738 KRT25Q7Z3Z0 450 aa8.16□□□□□ -1.1
CTDSPL2-207ENST00000559738 DNAJB12Q9NXW2 375 aaKnown RBP8.16□□□□□ -1.1
CTDSPL2-207ENST00000559738 ZFATQ9P243 1243 aa8.16□□□□□ -1.1
CTDSPL2-207ENST00000559738 STIM2Q9P246 746 aa8.16□□□□□ -1.1
CTDSPL2-207ENST00000559738 USTQ9Y2C2 406 aa8.16□□□□□ -1.1
CTDSPL2-207ENST00000559738 KCNMB2Q9Y691 235 aa8.16□□□□□ -1.1
CTDSPL2-207ENST00000559738 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
CTDSPL2-207ENST00000559738 NID1P14543 1247 aa8.15□□□□□ -1.1
CTDSPL2-207ENST00000559738 TARSP26639 723 aaKnown RBP8.15□□□□□ -1.1
CTDSPL2-207ENST00000559738 BAG6P46379 1132 aa8.15□□□□□ -1.1
CTDSPL2-207ENST00000559738 PRRT3Q5FWE3 981 aa8.15□□□□□ -1.1
CTDSPL2-207ENST00000559738 NAGPAQ9UK23 515 aa8.15□□□□□ -1.1
CTDSPL2-207ENST00000559738 LILRB5O75023 590 aa8.14□□□□□ -1.11
CTDSPL2-207ENST00000559738 SASH3O75995 380 aa8.14□□□□□ -1.11
CTDSPL2-207ENST00000559738 TRIP4Q15650 581 aaPredicted RBP8.14□□□□□ -1.11
CTDSPL2-207ENST00000559738 CMTR1Q8N1G2 835 aaKnown RBP8.14□□□□□ -1.11
CTDSPL2-207ENST00000559738 RETREG2Q8NC44 543 aa8.14□□□□□ -1.11
CTDSPL2-207ENST00000559738 HELQQ8TDG4 1101 aa8.14□□□□□ -1.11
CTDSPL2-207ENST00000559738 GTF3C2Q8WUA4 911 aaPredicted RBP8.14□□□□□ -1.11
CTDSPL2-207ENST00000559738 NUDT8Q8WV74 236 aa8.14□□□□□ -1.11
CTDSPL2-207ENST00000559738 JPH1Q9HDC5 661 aaPredicted RBP8.14□□□□□ -1.11
CTDSPL2-207ENST00000559738 C11orf16Q9NQ32 467 aa8.14□□□□□ -1.11
CTDSPL2-207ENST00000559738 XYLBO75191 536 aa8.13□□□□□ -1.11
CTDSPL2-207ENST00000559738 EGFRP00533 1210 aa8.13□□□□□ -1.11
CTDSPL2-207ENST00000559738 ZAP70P43403 619 aa8.13□□□□□ -1.11
CTDSPL2-207ENST00000559738 ADAM23O75077 832 aa8.12□□□□□ -1.11
CTDSPL2-207ENST00000559738 MAP3K6O95382 1288 aa8.12□□□□□ -1.11
CTDSPL2-207ENST00000559738 RARAP10276 462 aa8.12□□□□□ -1.11
CTDSPL2-207ENST00000559738 MTMR3Q13615 1198 aa8.12□□□□□ -1.11
CTDSPL2-207ENST00000559738 PSAPL1Q6NUJ1 521 aa8.12□□□□□ -1.11
CTDSPL2-207ENST00000559738 ZBTB42B2RXF5 422 aa8.11□□□□□ -1.11
CTDSPL2-207ENST00000559738 FURINP09958 794 aa8.11□□□□□ -1.11
CTDSPL2-207ENST00000559738 DHX32Q7L7V1 743 aaKnown RBP8.11□□□□□ -1.11
CTDSPL2-207ENST00000559738 FAM35AQ86V20 835 aa8.11□□□□□ -1.11
CTDSPL2-207ENST00000559738 ATCAYQ86WG3 371 aa8.11□□□□□ -1.11
CTDSPL2-207ENST00000559738 ABTB2Q8N961 1025 aa8.11□□□□□ -1.11
CTDSPL2-207ENST00000559738 GPR152Q8TDT2 470 aa8.11□□□□□ -1.11
CTDSPL2-207ENST00000559738 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
CTDSPL2-207ENST00000559738 CPB1P15086 417 aa8.1□□□□□ -1.11
CTDSPL2-207ENST00000559738 TRIM28Q13263 835 aaKnown RBP8.1□□□□□ -1.11
CTDSPL2-207ENST00000559738 TRAPPC3LQ5T215 181 aa8.1□□□□□ -1.11
CTDSPL2-207ENST00000559738 RGS9O75916 674 aaPredicted RBP8.09□□□□□ -1.11
CTDSPL2-207ENST00000559738 APBA3O96018 575 aa8.09□□□□□ -1.11
CTDSPL2-207ENST00000559738 MPSTP25325 297 aa8.09□□□□□ -1.11
CTDSPL2-207ENST00000559738 AFF1P51825 1210 aaKnown RBP8.09□□□□□ -1.11
CTDSPL2-207ENST00000559738 MLLT1Q03111 559 aaPredicted RBP8.09□□□□□ -1.11
CTDSPL2-207ENST00000559738 PIK3R5Q8WYR1 880 aa8.09□□□□□ -1.11
CTDSPL2-207ENST00000559738 GPLD1P80108 840 aa8.08□□□□□ -1.12
CTDSPL2-207ENST00000559738 GRIK4Q16099 956 aa8.08□□□□□ -1.12
CTDSPL2-207ENST00000559738 PCSK7Q16549 785 aa8.08□□□□□ -1.12
CTDSPL2-207ENST00000559738 TRPM4Q8TD43 1214 aa8.08□□□□□ -1.12
CTDSPL2-207ENST00000559738 UBAP1LF5GYI3 381 aa8.07□□□□□ -1.12
CTDSPL2-207ENST00000559738 MMP20O60882 483 aa8.07□□□□□ -1.12
CTDSPL2-207ENST00000559738 NPR3P17342 541 aa8.07□□□□□ -1.12
CTDSPL2-207ENST00000559738 GATA4P43694 442 aa8.07□□□□□ -1.12
CTDSPL2-207ENST00000559738 LPIN3Q9BQK8 851 aa8.07□□□□□ -1.12
CTDSPL2-207ENST00000559738 FAM13BQ9NYF5 915 aa8.07□□□□□ -1.12
CTDSPL2-207ENST00000559738 TLR7Q9NYK1 1049 aaKnown RBP8.07□□□□□ -1.12
CTDSPL2-207ENST00000559738 A0A0A0MRY4 1105 aa8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 EIF1AXP47813 144 aaKnown RBP8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 ZNF211Q13398 564 aaPredicted RBP8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 DOC2BQ14184 412 aa8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 NOM1Q5C9Z4 860 aaKnown RBP8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 PERM1Q5SV97 790 aa8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 ELMSAN1Q6PJG2 1045 aa8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 HFE2Q6ZVN8 426 aa8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 NLRP13Q86W25 1043 aa8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 NACC1Q96RE7 527 aa8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 ANO2Q9NQ90 1003 aa8.06□□□□□ -1.12
CTDSPL2-207ENST00000559738 ABL1P00519 1130 aa8.05□□□□□ -1.12
CTDSPL2-207ENST00000559738 ARID4AP29374 1257 aaPredicted RBP8.05□□□□□ -1.12
CTDSPL2-207ENST00000559738 NRLP54845 237 aa8.05□□□□□ -1.12
CTDSPL2-207ENST00000559738 RAC1P63000 192 aa8.05□□□□□ -1.12
CTDSPL2-207ENST00000559738 DMRTC2Q8IXT2 367 aaPredicted RBP8.05□□□□□ -1.12
CTDSPL2-207ENST00000559738 EDEM1Q92611 657 aa8.05□□□□□ -1.12
CTDSPL2-207ENST00000559738 FRRS1LQ9P0K9 344 aa8.05□□□□□ -1.12
CTDSPL2-207ENST00000559738 EIF2AK2P19525 551 aaKnown RBP8.04□□□□□ -1.12
CTDSPL2-207ENST00000559738 SERPINB4P48594 390 aa8.04□□□□□ -1.12
CTDSPL2-207ENST00000559738 PLAURQ03405 335 aa8.04□□□□□ -1.12
CTDSPL2-207ENST00000559738 B4GALNT3Q6L9W6 998 aa8.04□□□□□ -1.12
CTDSPL2-207ENST00000559738 NSUN5Q96P11 429 aaKnown RBP8.04□□□□□ -1.12
CTDSPL2-207ENST00000559738 MTMR7Q9Y216 660 aa8.04□□□□□ -1.12
CTDSPL2-207ENST00000559738 PDGFAP04085 211 aa8.03□□□□□ -1.12
CTDSPL2-207ENST00000559738 PSAPP07602 524 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms