RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 FBXO3Q9UK99 471 aa19.17■□□□□ 0.66
USP8-208ENST00000559329 ZNF330Q9Y3S2 320 aaPredicted RBP19.17■□□□□ 0.66
USP8-208ENST00000559329 CDHR2Q9BYE9 1310 aa19.17■□□□□ 0.66
USP8-208ENST00000559329 CSF1RP07333 972 aa19.17■□□□□ 0.66
USP8-208ENST00000559329 L1TD1Q5T7N2 865 aaKnown RBP19.17■□□□□ 0.66
USP8-208ENST00000559329 VPS53Q5VIR6 699 aa19.17■□□□□ 0.66
USP8-208ENST00000559329 ZNF594Q96JF6 807 aaPredicted RBP19.17■□□□□ 0.66
USP8-208ENST00000559329 LIMCH1Q9UPQ0 1083 aa19.17■□□□□ 0.66
USP8-208ENST00000559329 NWD2Q9ULI1 1742 aa19.17■□□□□ 0.66
USP8-208ENST00000559329 HLFQ16534 295 aa19.16■□□□□ 0.66
USP8-208ENST00000559329 TICAM2Q86XR7 235 aa19.16■□□□□ 0.66
USP8-208ENST00000559329 JAKMIP1Q96N16 626 aaKnown RBP19.16■□□□□ 0.66
USP8-208ENST00000559329 ZBTB1Q9Y2K1 713 aa19.16■□□□□ 0.66
USP8-208ENST00000559329 CICQ96RK0 1608 aaPredicted RBP19.16■□□□□ 0.66
USP8-208ENST00000559329 SPEF2Q9C093 1822 aa19.16■□□□□ 0.66
USP8-208ENST00000559329 PALLDQ8WX93 1383 aa19.16■□□□□ 0.66
USP8-208ENST00000559329 SLC27A2O14975 620 aa19.15■□□□□ 0.66
USP8-208ENST00000559329 TAF5LO75529 589 aa19.15■□□□□ 0.66
USP8-208ENST00000559329 PRIM1P49642 420 aaKnown RBP19.15■□□□□ 0.66
USP8-208ENST00000559329 KLHL40Q2TBA0 621 aa19.15■□□□□ 0.66
USP8-208ENST00000559329 LMBRD1Q9NUN5 540 aa19.15■□□□□ 0.66
USP8-208ENST00000559329 CPA1P15085 419 aa19.15■□□□□ 0.66
USP8-208ENST00000559329 ZKSCAN1P17029 563 aaPredicted RBP19.15■□□□□ 0.66
USP8-208ENST00000559329 HSP90AB3PQ58FF7 597 aa19.15■□□□□ 0.66
USP8-208ENST00000559329 USPL1Q5W0Q7 1092 aa19.15■□□□□ 0.66
USP8-208ENST00000559329 MCTP1Q6DN14 999 aa19.15■□□□□ 0.66
USP8-208ENST00000559329 NLRP10Q86W26 655 aa19.15■□□□□ 0.66
USP8-208ENST00000559329 PUS3Q9BZE2 481 aaKnown RBP19.15■□□□□ 0.66
USP8-208ENST00000559329 NDUFB9Q9Y6M9 179 aa19.15■□□□□ 0.66
USP8-208ENST00000559329 RREB1Q92766 1687 aa19.14■□□□□ 0.66
USP8-208ENST00000559329 NUP98P52948 1817 aa19.14■□□□□ 0.66
USP8-208ENST00000559329 GOLGA6L3A6NEY3 463 aa19.14■□□□□ 0.65
USP8-208ENST00000559329 ADAMTS2O95450 1211 aa19.14■□□□□ 0.65
USP8-208ENST00000559329 TSGA10IPQ3SY00 556 aa19.14■□□□□ 0.65
USP8-208ENST00000559329 KBTBD3Q8NAB2 608 aa19.14■□□□□ 0.65
USP8-208ENST00000559329 FAM89AQ96GI7 184 aa19.14■□□□□ 0.65
USP8-208ENST00000559329 DNAJC2Q99543 621 aaKnown RBP19.14■□□□□ 0.65
USP8-208ENST00000559329 SLIT2O94813 1529 aa19.14■□□□□ 0.65
USP8-208ENST00000559329 IL6STP40189 918 aaPredicted RBP19.13■□□□□ 0.65
USP8-208ENST00000559329 TIMM10P62072 90 aa19.13■□□□□ 0.65
USP8-208ENST00000559329 CCDC57Q2TAC2 916 aa19.13■□□□□ 0.65
USP8-208ENST00000559329 ISY1Q9ULR0 285 aaKnown RBP19.13■□□□□ 0.65
USP8-208ENST00000559329 CYP46A1Q9Y6A2 500 aa19.13■□□□□ 0.65
USP8-208ENST00000559329 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.13■□□□□ 0.65
USP8-208ENST00000559329 SYTL4Q96C24 671 aaPredicted RBP19.13■□□□□ 0.65
USP8-208ENST00000559329 PDRG1Q9NUG6 133 aa19.13■□□□□ 0.65
USP8-208ENST00000559329 BRPF3Q9ULD4 1205 aa19.13■□□□□ 0.65
USP8-208ENST00000559329 SPATA31A5Q5VU36 1347 aa19.13■□□□□ 0.65
USP8-208ENST00000559329 SPATA31A7Q8IWB4 1347 aa19.13■□□□□ 0.65
USP8-208ENST00000559329 SH3TC1Q8TE82 1336 aa19.13■□□□□ 0.65
USP8-208ENST00000559329 A0A1B0GUL7 405 aa19.12■□□□□ 0.65
USP8-208ENST00000559329 ERVV-1B6SEH8 477 aa19.12■□□□□ 0.65
USP8-208ENST00000559329 DDB1Q16531 1140 aa19.12■□□□□ 0.65
USP8-208ENST00000559329 DDX46Q7L014 1031 aaKnown RBP19.12■□□□□ 0.65
USP8-208ENST00000559329 NEUROD6Q96NK8 337 aa19.12■□□□□ 0.65
USP8-208ENST00000559329 HMG20BQ9P0W2 317 aa19.12■□□□□ 0.65
USP8-208ENST00000559329 KCNJ4P48050 445 aa19.12■□□□□ 0.65
USP8-208ENST00000559329 RNF20Q5VTR2 975 aa19.12■□□□□ 0.65
USP8-208ENST00000559329 RIC1Q4ADV7 1423 aa19.11■□□□□ 0.65
USP8-208ENST00000559329 MYH3P11055 1940 aa19.11■□□□□ 0.65
USP8-208ENST00000559329 LARGE1O95461 756 aa19.11■□□□□ 0.65
USP8-208ENST00000559329 CHGBP05060 677 aa19.11■□□□□ 0.65
USP8-208ENST00000559329 PAG1Q9NWQ8 432 aa19.11■□□□□ 0.65
USP8-208ENST00000559329 PSMA5P28066 241 aa19.1■□□□□ 0.65
USP8-208ENST00000559329 MCMDC2Q4G0Z9 681 aa19.1■□□□□ 0.65
USP8-208ENST00000559329 MARCH10Q8NA82 808 aaPredicted RBP19.1■□□□□ 0.65
USP8-208ENST00000559329 ZSCAN31Q96LW9 406 aaPredicted RBP19.1■□□□□ 0.65
USP8-208ENST00000559329 ALDH8A1Q9H2A2 487 aaPredicted RBP19.1■□□□□ 0.65
USP8-208ENST00000559329 SH2B1Q9NRF2 756 aaPredicted RBP19.1■□□□□ 0.65
USP8-208ENST00000559329 CEP126Q9P2H0 1117 aa19.1■□□□□ 0.65
USP8-208ENST00000559329 TAF6LQ9Y6J9 622 aa19.1■□□□□ 0.65
USP8-208ENST00000559329 KAT6BQ8WYB5 2073 aa19.1■□□□□ 0.65
USP8-208ENST00000559329 GPTP24298 496 aa19.1■□□□□ 0.65
USP8-208ENST00000559329 COL9A3Q14050 684 aaPredicted RBP19.1■□□□□ 0.65
USP8-208ENST00000559329 BARGINQ6ZT62 677 aa19.1■□□□□ 0.65
USP8-208ENST00000559329 SYNE4Q8N205 404 aa19.1■□□□□ 0.65
USP8-208ENST00000559329 DDX49Q9Y6V7 483 aaKnown RBP19.1■□□□□ 0.65
USP8-208ENST00000559329 XRCC6P12956 609 aaKnown RBP eCLIP19.09■□□□□ 0.65
USP8-208ENST00000559329 IFIT5Q13325 482 aaKnown RBP19.09■□□□□ 0.65
USP8-208ENST00000559329 TTLL11Q8NHH1 800 aa19.09■□□□□ 0.65
USP8-208ENST00000559329 SEC62Q99442 399 aaKnown RBP19.09■□□□□ 0.65
USP8-208ENST00000559329 LARP6Q9BRS8 491 aaKnown RBP19.09■□□□□ 0.65
USP8-208ENST00000559329 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.09■□□□□ 0.65
USP8-208ENST00000559329 LRP5O75197 1615 aa19.09■□□□□ 0.65
USP8-208ENST00000559329 WDR33Q9C0J8 1336 aaKnown RBP19.08■□□□□ 0.65
USP8-208ENST00000559329 GOLIM4O00461 696 aa19.08■□□□□ 0.65
USP8-208ENST00000559329 EIF5P55010 431 aaKnown RBP19.08■□□□□ 0.65
USP8-208ENST00000559329 CTSWP56202 376 aa19.08■□□□□ 0.65
USP8-208ENST00000559329 ST3GAL1Q11201 340 aa19.08■□□□□ 0.65
USP8-208ENST00000559329 DZIP3Q86Y13 1208 aaKnown RBP19.08■□□□□ 0.65
USP8-208ENST00000559329 ZNF34Q8IZ26 560 aa19.08■□□□□ 0.65
USP8-208ENST00000559329 CHAMP1Q96JM3 812 aa19.08■□□□□ 0.65
USP8-208ENST00000559329 AKAP2Q9Y2D5 859 aa19.08■□□□□ 0.65
USP8-208ENST00000559329 UBN2Q6ZU65 1347 aa19.08■□□□□ 0.64
USP8-208ENST00000559329 INTS5Q6P9B9 1019 aaKnown RBP19.08■□□□□ 0.64
USP8-208ENST00000559329 ARXQ96QS3 562 aa19.08■□□□□ 0.64
USP8-208ENST00000559329 HELLSQ9NRZ9 838 aa19.08■□□□□ 0.64
USP8-208ENST00000559329 CCDC9Q9Y3X0 531 aaKnown RBP19.08■□□□□ 0.64
USP8-208ENST00000559329 U3KPZ7 1027 aaPredicted RBP19.08■□□□□ 0.64
USP8-208ENST00000559329 IFIT1P09914 478 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms