RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 C2CD5Q86YS7 1000 aa8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 ANKRD44Q8N8A2 993 aa8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 TTLL11Q8NHH1 800 aa8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 RBM17Q96I25 401 aaKnown RBP8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 KAZALD1Q96I82 304 aa8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 CD2APQ9Y5K6 639 aa8.23□□□□□ -1.09
CHRNA3-204ENST00000559002 LAMB2P55268 1798 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 TNRC6CQ9HCJ0 1690 aaKnown RBP8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 ANKRD18BA2A2Z9 1011 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 KLRG2A4D1S0 409 aaPredicted RBP8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 SRGAP3O43295 1099 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 HMMRO75330 724 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 CSF1RP07333 972 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 NPR1P16066 1061 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 ITGA6P23229 1130 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 TGFB2P61812 414 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 IFIT5Q13325 482 aaKnown RBP8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 MTX1Q13505 466 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 CRY2Q49AN0 593 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 CEP85Q6P2H3 762 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 RPAP2Q8IXW5 612 aaPredicted RBP8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 ZNF622Q969S3 477 aaKnown RBP eCLIP8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 MASTLQ96GX5 879 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 CDC5LQ99459 802 aaKnown RBP8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 GREM2Q9H772 168 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 RTL9Q8NET4 1388 aa8.22□□□□□ -1.09
CHRNA3-204ENST00000559002 DDX60Q8IY21 1712 aaKnown RBP8.21□□□□□ -1.09
CHRNA3-204ENST00000559002 SRGNP10124 158 aa8.21□□□□□ -1.1
CHRNA3-204ENST00000559002 CHRNA5P30532 468 aa8.21□□□□□ -1.1
CHRNA3-204ENST00000559002 ALDH1B1P30837 517 aa8.21□□□□□ -1.1
CHRNA3-204ENST00000559002 IGHMBP2P38935 993 aaKnown RBP8.21□□□□□ -1.1
CHRNA3-204ENST00000559002 ATP8B2P98198 1209 aa8.21□□□□□ -1.1
CHRNA3-204ENST00000559002 ERICH6BQ5W0A0 696 aa8.21□□□□□ -1.1
CHRNA3-204ENST00000559002 STYK1Q6J9G0 422 aa8.21□□□□□ -1.1
CHRNA3-204ENST00000559002 SEC31BQ9NQW1 1179 aa8.21□□□□□ -1.1
CHRNA3-204ENST00000559002 SRCAPQ6ZRS2 3230 aa8.21□□□□□ -1.1
CHRNA3-204ENST00000559002 A0A0G2JLW4 131 aa8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 PNMA6EA0A0J9YXQ4 647 aa8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 DPEP1P16444 411 aa8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 HOXA10P31260 410 aaPredicted RBP8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 GRAPQ13588 217 aa8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 ANKRD18AQ8IVF6 992 aa8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 GRAPLQ8TC17 118 aaPredicted RBP8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 CNKSR1Q969H4 720 aa8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 CRAMP1Q96RY5 1269 aa8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 MPHOSPH8Q99549 860 aa8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 FHDC1Q9C0D6 1143 aaPredicted RBP8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 TMX4Q9H1E5 349 aaPredicted RBP8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 PCDHB15Q9Y5E8 787 aa8.2□□□□□ -1.1
CHRNA3-204ENST00000559002 PPEF1O14829 653 aaPredicted RBP8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 RPS8P62241 208 aaKnown RBP8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 OS9Q13438 667 aaPredicted RBP8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 POLA2Q14181 598 aa8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 TMC4Q7Z404 712 aa8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 TTLL6Q8N841 843 aa8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 NLGN2Q8NFZ4 835 aa8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 SSH3Q8TE77 659 aa8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 CELF1Q92879 486 aaKnown RBP8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 ZNF594Q96JF6 807 aaPredicted RBP8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 SIL1Q9H173 461 aa8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 RWDD1Q9H446 243 aaPredicted RBP8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 CNNM1Q9NRU3 951 aa8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 PIM2Q9P1W9 311 aa8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 ANKRD31Q8N7Z5 1873 aa8.19□□□□□ -1.1
CHRNA3-204ENST00000559002 LRP5O75197 1615 aa8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 COL11A2P13942 1736 aaPredicted RBP8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 SURF6O75683 361 aaKnown RBP8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 BBOX1O75936 387 aa8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 RFX5P48382 616 aaPredicted RBP8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 PTPN12Q05209 780 aaKnown RBP8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 G3BP1Q13283 466 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 HSP90AB4PQ58FF6 505 aa8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 DALRD3Q5D0E6 543 aaKnown RBP8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 PRPF40BQ6NWY9 871 aaKnown RBP8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 LDHAL6AQ6ZMR3 332 aa8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 SIRT2Q8IXJ6 389 aa8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 KLHDC4Q8TBB5 520 aa8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 SYT17Q9BSW7 474 aa8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 COPRSQ9NQ92 184 aa8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 PA2G4Q9UQ80 394 aaKnown RBP8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 MYH3P11055 1940 aa8.18□□□□□ -1.1
CHRNA3-204ENST00000559002 KIF13BQ9NQT8 1826 aa8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 EYA2O00167 538 aa8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 IL15P40933 162 aaPredicted RBP8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 HDAC1Q13547 482 aaPredicted RBP8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 ERC1Q8IUD2 1116 aa8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 CCDC136Q96JN2 1154 aa8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 BSDC1Q9NW68 430 aaPredicted RBP8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 ZNF219Q9P2Y4 722 aaPredicted RBP8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 ZBTB47Q9UFB7 747 aaPredicted RBP8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 FBXO3Q9UK99 471 aa8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 WWC3Q9ULE0 1092 aa8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 BCS1LQ9Y276 419 aa8.17□□□□□ -1.1
CHRNA3-204ENST00000559002 APBB1O00213 710 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 CIAO1O76071 339 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 KCNA3P22001 575 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 LRRC24Q50LG9 513 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 METTL24Q5JXM2 366 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 SOGA3Q5TF21 947 aa8.16□□□□□ -1.1
CHRNA3-204ENST00000559002 MROH5Q6ZUA9 1318 aa8.16□□□□□ -1.1
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