RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 LLPHQ9BRT6 129 aaKnown RBP7.7□□□□□ -1.18
AC087516.2-201ENST00000558963 NKX1-1Q15270 411 aaPredicted RBP7.7□□□□□ -1.18
AC087516.2-201ENST00000558963 ESCO1Q5FWF5 840 aa7.7□□□□□ -1.18
AC087516.2-201ENST00000558963 CREB3L3Q68CJ9 461 aa7.7□□□□□ -1.18
AC087516.2-201ENST00000558963 USHBP1Q8N6Y0 703 aa7.7□□□□□ -1.18
AC087516.2-201ENST00000558963 PDRG1Q9NUG6 133 aa7.7□□□□□ -1.18
AC087516.2-201ENST00000558963 C9orf78Q9NZ63 289 aaPredicted RBP7.7□□□□□ -1.18
AC087516.2-201ENST00000558963 SMC3Q9UQE7 1217 aa7.7□□□□□ -1.18
AC087516.2-201ENST00000558963 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.7□□□□□ -1.18
AC087516.2-201ENST00000558963 MYH3P11055 1940 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 ZNF831Q5JPB2 1677 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 ZNF609O15014 1411 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 SOX12O15370 315 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 RPS6KB1P23443 525 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 PRDM4Q9UKN5 801 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 DOCK2Q92608 1830 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 SLC27A2O14975 620 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 HSPA1LP34931 641 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 NEXNQ0ZGT2 675 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 KRT28Q7Z3Y7 464 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 IFNL2Q8IZJ0 200 aa7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 EAF2Q96CJ1 260 aaPredicted RBP7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 UPF3BQ9BZI7 483 aaKnown RBP7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 BICC1Q9H694 974 aaKnown RBP7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 RBM8AQ9Y5S9 174 aaKnown RBP7.69□□□□□ -1.18
AC087516.2-201ENST00000558963 CIAO1O76071 339 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 HMGB1P09429 215 aaKnown RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 SNRPA1P09661 255 aaKnown RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 PTH1RQ03431 593 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 G3BP1Q13283 466 aaKnown RBP eCLIP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 PROSER3Q2NL68 480 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 MPRIPQ6WCQ1 1025 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 LRRC59Q96AG4 307 aaKnown RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 HAUS7Q99871 368 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 U3KPZ7 1027 aaPredicted RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 ATRNO75882 1429 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 CASTP20810 708 aaKnown RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 EVCP57679 992 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 PLBD2Q8NHP8 589 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 CCDC94Q9BW85 323 aaPredicted RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 SCAND2PQ9GZW5 306 aaPredicted RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 C4AP0C0L4 1744 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 C4BP0C0L5 1744 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 TIAM2Q8IVF5 1701 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 WDR19Q8NEZ3 1342 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 TATP17735 454 aaPredicted RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 EIF2S2P20042 333 aaKnown RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 UTP14CQ5TAP6 766 aaKnown RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 CWC27Q6UX04 472 aaKnown RBP7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 AACSQ86V21 672 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 SMARCC2Q8TAQ2 1214 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 AXIN2Q9Y2T1 843 aa7.68□□□□□ -1.18
AC087516.2-201ENST00000558963 TAF5LO75529 589 aa7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 NMIQ13287 307 aaPredicted RBP7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 LTV1Q96GA3 475 aaPredicted RBP7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 DSCC1Q9BVC3 393 aa7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 FAM13BQ9NYF5 915 aa7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 H7C1W4 665 aa7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 GADD45BO75293 160 aaPredicted RBP7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 GJB2P29033 226 aa7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 RBM10P98175 930 aaKnown RBP7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 PTPN12Q05209 780 aaKnown RBP7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 NOLC1Q14978 699 aaKnown RBP eCLIP7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 ME3Q16798 604 aa7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 NUTM2GQ5VZR2 741 aa7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 RAPGEF4Q8WZA2 1011 aa7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 JAKMIP1Q96N16 626 aaKnown RBP7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 FMNL2Q96PY5 1086 aa7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 HELLSQ9NRZ9 838 aa7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 DDX19AQ9NUU7 478 aaKnown RBP7.67□□□□□ -1.18
AC087516.2-201ENST00000558963 ERVV-2B6SEH9 535 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 TOB2Q14106 344 aaPredicted RBP7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 TNNI3KQ59H18 835 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 NAA16Q6N069 864 aaPredicted RBP7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 NECTIN2Q92692 538 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 CHAMP1Q96JM3 812 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 ZSCAN16Q9H4T2 348 aaPredicted RBP7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 FPGT-TNNI3KV9GXZ4 949 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 COL5A2P05997 1499 aaPredicted RBP7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 SPATA31A3Q5VYP0 1347 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 ITGB4P16144 1822 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 KDM4AO75164 1064 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 LARGE1O95461 756 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 KRT85P78386 507 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 OS9Q13438 667 aaPredicted RBP7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 ADCK5Q3MIX3 580 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 BLOC1S2Q6QNY1 142 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 GTF3C6Q969F1 213 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 ORAI2Q96SN7 254 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 PLA2G12BQ9BX93 195 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 SALL1Q9NSC2 1324 aa7.66□□□□□ -1.18
AC087516.2-201ENST00000558963 CDC25BP30305 580 aa7.65□□□□□ -1.18
AC087516.2-201ENST00000558963 TRIM28Q13263 835 aaKnown RBP7.65□□□□□ -1.18
AC087516.2-201ENST00000558963 CWF19L2Q2TBE0 894 aaKnown RBP7.65□□□□□ -1.18
AC087516.2-201ENST00000558963 PRPF40BQ6NWY9 871 aaKnown RBP7.65□□□□□ -1.18
AC087516.2-201ENST00000558963 ANKRD13DQ6ZTN6 518 aa7.65□□□□□ -1.18
AC087516.2-201ENST00000558963 RNF214Q8ND24 703 aa7.65□□□□□ -1.18
AC087516.2-201ENST00000558963 TPCN1Q9ULQ1 816 aa7.65□□□□□ -1.18
AC087516.2-201ENST00000558963 CNPY2Q9Y2B0 182 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms