RNA–Protein interactions for RNA: ENST00000558904.2

RORA-208, Transcript of RAR related orphan receptor A, human

TSL 2

Gene RORA, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RORA-208	ENST00000558904	PPP1R42	Q7Z4L9	355 aa		11.73	□□□□□ -0.53
RORA-208	ENST00000558904	USP48	Q86UV5	1035 aa		11.73	□□□□□ -0.53
RORA-208	ENST00000558904	GBA2	Q9HCG7	927 aa	Predicted RBP	11.73	□□□□□ -0.53
RORA-208	ENST00000558904	RNF186	Q9NXI6	227 aa		11.73	□□□□□ -0.53
RORA-208	ENST00000558904	COL4A5	P29400	1685 aa		11.72	□□□□□ -0.53
RORA-208	ENST00000558904	MAP3K15	Q6ZN16	1313 aa		11.72	□□□□□ -0.53
RORA-208	ENST00000558904	PRAMEF22	A3QJZ6	481 aa		11.72	□□□□□ -0.53
RORA-208	ENST00000558904	HTATSF1	O43719	755 aa	Known RBP	11.72	□□□□□ -0.53
RORA-208	ENST00000558904	ZNF157	P51786	506 aa	Predicted RBP	11.72	□□□□□ -0.53
RORA-208	ENST00000558904	HIRA	P54198	1017 aa	Predicted RBP	11.72	□□□□□ -0.53
RORA-208	ENST00000558904	KIAA2012	Q0VF49	1180 aa		11.72	□□□□□ -0.53
RORA-208	ENST00000558904	DPP8	Q6V1X1	898 aa	Predicted RBP	11.72	□□□□□ -0.53
RORA-208	ENST00000558904	SP8	Q8IXZ3	490 aa		11.72	□□□□□ -0.53
RORA-208	ENST00000558904	MPND	Q8N594	471 aa		11.72	□□□□□ -0.53
RORA-208	ENST00000558904	DPF2	Q92785	391 aa		11.72	□□□□□ -0.53
RORA-208	ENST00000558904	ZIC5	Q96T25	663 aa		11.72	□□□□□ -0.53
RORA-208	ENST00000558904	ABCC12	Q96J65	1359 aa		11.71	□□□□□ -0.53
RORA-208	ENST00000558904	FAM155A	B1AL88	458 aa	Predicted RBP	11.71	□□□□□ -0.53
RORA-208	ENST00000558904	TAF7	Q15545	349 aa	Predicted RBP	11.71	□□□□□ -0.53
RORA-208	ENST00000558904	PARP10	Q53GL7	1025 aa		11.71	□□□□□ -0.53
RORA-208	ENST00000558904	DCPS	Q96C86	337 aa	Known RBP	11.71	□□□□□ -0.53
RORA-208	ENST00000558904	NUDC	Q9Y266	331 aa		11.71	□□□□□ -0.53
RORA-208	ENST00000558904	RAD17	O75943	681 aa		11.7	□□□□□ -0.54
RORA-208	ENST00000558904	SLC10A5	Q5PT55	438 aa		11.7	□□□□□ -0.54
RORA-208	ENST00000558904	SUSD4	Q5VX71	490 aa		11.7	□□□□□ -0.54
RORA-208	ENST00000558904	KRT26	Q7Z3Y9	468 aa		11.7	□□□□□ -0.54
RORA-208	ENST00000558904	NGEF	Q8N5V2	710 aa		11.7	□□□□□ -0.54
RORA-208	ENST00000558904	PNISR	Q8TF01	805 aa	Known RBP	11.7	□□□□□ -0.54
RORA-208	ENST00000558904	CFAP53	Q96M91	514 aa		11.7	□□□□□ -0.54
RORA-208	ENST00000558904	CSRNP1	Q96S65	589 aa		11.7	□□□□□ -0.54
RORA-208	ENST00000558904	HDAC9	Q9UKV0	1011 aa		11.7	□□□□□ -0.54
RORA-208	ENST00000558904	AKAP11	Q9UKA4	1901 aa		11.7	□□□□□ -0.54
RORA-208	ENST00000558904	CLSPN	Q9HAW4	1339 aa		11.69	□□□□□ -0.54
RORA-208	ENST00000558904	RPS12	P25398	132 aa	Known RBP	11.69	□□□□□ -0.54
RORA-208	ENST00000558904	PRKAR2B	P31323	418 aa		11.69	□□□□□ -0.54
RORA-208	ENST00000558904	TMC4	Q7Z404	712 aa		11.69	□□□□□ -0.54
RORA-208	ENST00000558904	MICALL2	Q8IY33	904 aa		11.69	□□□□□ -0.54
RORA-208	ENST00000558904	ZNF34	Q8IZ26	560 aa		11.69	□□□□□ -0.54
RORA-208	ENST00000558904	TRPM4	Q8TD43	1214 aa		11.69	□□□□□ -0.54
RORA-208	ENST00000558904	PHACTR3	Q96KR7	559 aa		11.69	□□□□□ -0.54
RORA-208	ENST00000558904	HPS5	Q9UPZ3	1129 aa		11.69	□□□□□ -0.54
RORA-208	ENST00000558904	SLC10A3	P09131	477 aa		11.68	□□□□□ -0.54
RORA-208	ENST00000558904	GPT	P24298	496 aa		11.68	□□□□□ -0.54
RORA-208	ENST00000558904	CC2D1B	Q5T0F9	858 aa	Known RBP	11.68	□□□□□ -0.54
RORA-208	ENST00000558904	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.68	□□□□□ -0.54
RORA-208	ENST00000558904	RRP7A	Q9Y3A4	280 aa	Known RBP	11.68	□□□□□ -0.54
RORA-208	ENST00000558904	PER1	O15534	1290 aa	Predicted RBP	11.67	□□□□□ -0.54
RORA-208	ENST00000558904	NTSR2	O95665	410 aa		11.67	□□□□□ -0.54
RORA-208	ENST00000558904	FKBP1B	P68106	108 aa		11.67	□□□□□ -0.54
RORA-208	ENST00000558904	DDX46	Q7L014	1031 aa	Known RBP	11.67	□□□□□ -0.54
RORA-208	ENST00000558904	MCM10	Q7L590	875 aa		11.67	□□□□□ -0.54
RORA-208	ENST00000558904	SULF1	Q8IWU6	871 aa		11.67	□□□□□ -0.54
RORA-208	ENST00000558904	UTP14A	Q9BVJ6	771 aa	Known RBP	11.67	□□□□□ -0.54
RORA-208	ENST00000558904	RSPH6A	Q9H0K4	717 aa		11.67	□□□□□ -0.54
RORA-208	ENST00000558904	NUP98	P52948	1817 aa		11.67	□□□□□ -0.54
RORA-208	ENST00000558904	ABCC4	O15439	1325 aa		11.66	□□□□□ -0.54
RORA-208	ENST00000558904	UBN2	Q6ZU65	1347 aa		11.66	□□□□□ -0.54
RORA-208	ENST00000558904	NOM1	Q5C9Z4	860 aa	Known RBP	11.66	□□□□□ -0.54
RORA-208	ENST00000558904	ZBTB3	Q9H5J0	574 aa		11.66	□□□□□ -0.54
RORA-208	ENST00000558904	ERBB4	Q15303	1308 aa		11.65	□□□□□ -0.54
RORA-208	ENST00000558904	NEFM	P07197	916 aa		11.65	□□□□□ -0.54
RORA-208	ENST00000558904	WASHC4	Q2M389	1173 aa		11.65	□□□□□ -0.54
RORA-208	ENST00000558904	HABP4	Q5JVS0	413 aa	Known RBP	11.65	□□□□□ -0.54
RORA-208	ENST00000558904	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.65	□□□□□ -0.54
RORA-208	ENST00000558904	TTLL7	Q6ZT98	887 aa		11.65	□□□□□ -0.54
RORA-208	ENST00000558904	SAMD7	Q7Z3H4	446 aa		11.65	□□□□□ -0.54
RORA-208	ENST00000558904	MYL6B	P14649	208 aa		11.64	□□□□□ -0.55
RORA-208	ENST00000558904	GRAP	Q13588	217 aa		11.64	□□□□□ -0.55
RORA-208	ENST00000558904	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	11.64	□□□□□ -0.55
RORA-208	ENST00000558904	HSP90AB3P	Q58FF7	597 aa		11.64	□□□□□ -0.55
RORA-208	ENST00000558904	RBM26	Q5T8P6	1007 aa	Known RBP	11.64	□□□□□ -0.55
RORA-208	ENST00000558904	GRAPL	Q8TC17	118 aa	Predicted RBP	11.64	□□□□□ -0.55
RORA-208	ENST00000558904	COL3A1	P02461	1466 aa	Predicted RBP	11.63	□□□□□ -0.55
RORA-208	ENST00000558904	YDJC	A8MPS7	323 aa		11.63	□□□□□ -0.55
RORA-208	ENST00000558904	PSMD14	O00487	310 aa		11.63	□□□□□ -0.55
RORA-208	ENST00000558904	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.63	□□□□□ -0.55
RORA-208	ENST00000558904	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
RORA-208	ENST00000558904	INTS3	Q68E01	1043 aa	Known RBP	11.63	□□□□□ -0.55
RORA-208	ENST00000558904	C3orf67	Q6ZVT6	689 aa		11.63	□□□□□ -0.55
RORA-208	ENST00000558904	NECTIN2	Q92692	538 aa		11.63	□□□□□ -0.55
RORA-208	ENST00000558904	EYA3	Q99504	573 aa		11.63	□□□□□ -0.55
RORA-208	ENST00000558904	FOXD4L1	Q9NU39	408 aa		11.63	□□□□□ -0.55
RORA-208	ENST00000558904	POLR2A	P24928	1970 aa	Known RBP	11.62	□□□□□ -0.55
RORA-208	ENST00000558904	ADM5	C9JUS6	153 aa		11.62	□□□□□ -0.55
RORA-208	ENST00000558904	DCTN1	Q14203	1278 aa		11.62	□□□□□ -0.55
RORA-208	ENST00000558904	KIF4B	Q2VIQ3	1234 aa		11.62	□□□□□ -0.55
RORA-208	ENST00000558904	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.62	□□□□□ -0.55
RORA-208	ENST00000558904	SHTN1	A0MZ66	631 aa		11.61	□□□□□ -0.55
RORA-208	ENST00000558904	TM4SF4	P48230	202 aa		11.61	□□□□□ -0.55
RORA-208	ENST00000558904	EIF4A1	P60842	406 aa	Known RBP	11.61	□□□□□ -0.55
RORA-208	ENST00000558904	DLK2	Q6UY11	383 aa		11.61	□□□□□ -0.55
RORA-208	ENST00000558904	RASAL3	Q86YV0	1011 aa		11.61	□□□□□ -0.55
RORA-208	ENST00000558904	CDCA5	Q96FF9	252 aa		11.61	□□□□□ -0.55
RORA-208	ENST00000558904	MIS18A	Q9NYP9	233 aa		11.61	□□□□□ -0.55
RORA-208	ENST00000558904	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.61	□□□□□ -0.55
RORA-208	ENST00000558904		G3V3G9	751 aa		11.6	□□□□□ -0.55
RORA-208	ENST00000558904	C6orf229	H3BNL8	230 aa		11.6	□□□□□ -0.55
RORA-208	ENST00000558904	GPR25	O00155	361 aa		11.6	□□□□□ -0.55
RORA-208	ENST00000558904	TBC1D8	O95759	1140 aa		11.6	□□□□□ -0.55
RORA-208	ENST00000558904	SREBF2	Q12772	1141 aa		11.6	□□□□□ -0.55

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