RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 SPATA31C2B4DYI2 1134 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 RNFT1Q5M7Z0 435 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 SCARA3Q6AZY7 606 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 FIGNL1Q6PIW4 674 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 TMC7Q7Z402 723 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 SLC9A9Q8IVB4 645 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 RHPN1Q8TCX5 695 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 TGIF2Q9GZN2 237 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 CUEDC1Q9NWM3 386 aaPredicted RBP2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 SCHIP1Q9P0W5 487 aaPredicted RBP2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 NOS2P35228 1153 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 CLN3Q13286 438 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 COL9A2Q14055 689 aaPredicted RBP2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 ERMP1Q7Z2K6 904 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 TMC4Q7Z404 712 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 PGBD3Q8N328 593 aa2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 C2orf49Q9BVC5 232 aaPredicted RBP2.03□□□□□ -2.08
CTDSPL2-202ENST00000558373 SORBS3O60504 671 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 ARSDP51689 593 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 RING1Q06587 406 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 SLC27A3Q5K4L6 730 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 FOXR1Q6PIV2 292 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 NOP9Q86U38 636 aaKnown RBP2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 IFT43Q96FT9 208 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 PSMG3-AS1Q96PY0 264 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 CSRNP1Q96S65 589 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 CCSER2Q9H7U1 834 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 STRIP2Q9ULQ0 834 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 ZNF232Q9UNY5 417 aa2.03□□□□□ -2.09
CTDSPL2-202ENST00000558373 CAPN5O15484 640 aaPredicted RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 TREHO43280 583 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 KCNQ2O43526 872 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 CPNE3O75131 537 aaKnown RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 EGFRP00533 1210 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 LDHBP07195 334 aaKnown RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 DAB2P98082 770 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 CENPCQ03188 943 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 TTC39BQ5VTQ0 682 aaPredicted RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 WFDC3Q8IUB2 231 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 HIRIP3Q9BW71 556 aaPredicted RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 CAPN10Q9HC96 672 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 USP35Q9P2H5 1018 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 VTI1BQ9UEU0 232 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 SERTAD1Q9UHV2 236 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 SLC35F4A4IF30 521 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 H7C1W4 665 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 HSP90B1P14625 803 aaKnown RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 ST13P50502 369 aaKnown RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 PPP1R26Q5T8A7 1209 aaPredicted RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 AMIGO3Q86WK7 504 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 ZNF428Q96B54 188 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 PHF24Q9UPV7 400 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 AK5Q9Y6K8 562 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 NFKBIEO00221 500 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 FSHRP23945 695 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 ERCC5P28715 1186 aaPredicted RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 TESK1Q15569 626 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 ENOX2Q16206 610 aaKnown RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 HP1BP3Q5SSJ5 553 aaPredicted RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 LCE3BQ5TA77 95 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 PDE12Q6L8Q7 609 aaKnown RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 KANK3Q6NY19 840 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 NLRP8Q86W28 1048 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 RELL1Q8IUW5 271 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 OR6P1Q8NGX9 317 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 CEP44Q9C0F1 390 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 OSBPL3Q9H4L5 887 aa2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 QTRT2Q9H974 415 aaKnown RBP2.02□□□□□ -2.09
CTDSPL2-202ENST00000558373 ALDH1A1P00352 501 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 NR3C2P08235 984 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 FKBP5Q13451 457 aaPredicted RBP2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 CAPN12Q6ZSI9 719 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 RPUSD2Q8IZ73 545 aaKnown RBP2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 TMEM87AQ8NBN3 555 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 RASGRP4Q8TDF6 673 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 SNX29Q8TEQ0 813 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 PDGFDQ9GZP0 370 aaPredicted RBP2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 RBSNQ9H1K0 784 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 CYLDQ9NQC7 956 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 FAM8A1Q9UBU6 413 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 DNMT3LQ9UJW3 386 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 ROBO2Q9HCK4 1378 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 SENP3-EIF4A1A0A087X0R7 540 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 MEN1O00255 615 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 GNA15P30679 374 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 CYP4F3Q08477 520 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 SV2BQ7L1I2 683 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 TSEN2Q8NCE0 465 aaKnown RBP2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 EMILIN2Q9BXX0 1053 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 PPM1HQ9ULR3 514 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 PRR36Q9H6K5 1346 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 A0A1W2PRU2 124 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 PDGFAP04085 211 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 EIF1AXP47813 144 aaKnown RBP2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 SERPINB4P48594 390 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 NNTQ13423 1086 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 RPS26P11Q5JNZ5 115 aaPredicted RBP2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 NBPF6Q5VWK0 638 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 TNS4Q8IZW8 715 aa2.01□□□□□ -2.09
CTDSPL2-202ENST00000558373 CHMP7Q8WUX9 453 aaPredicted RBP2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms