RNA–Protein interactions for RNA: ENST00000557769.5

CCDC85C-207, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 2 BASIC

Gene CCDC85C, Length 3,793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-207ENST00000557769 HSPA1LP34931 641 aa12.83□□□□□ -0.36
CCDC85C-207ENST00000557769 INTS4Q96HW7 963 aaKnown RBP12.83□□□□□ -0.36
CCDC85C-207ENST00000557769 EIF4A2Q14240 407 aaKnown RBP12.83□□□□□ -0.36
CCDC85C-207ENST00000557769 TEX35Q5T0J7 233 aa12.83□□□□□ -0.36
CCDC85C-207ENST00000557769 KIAA1524Q8TCG1 905 aa12.83□□□□□ -0.36
CCDC85C-207ENST00000557769 ZNF215Q9UL58 517 aaPredicted RBP12.83□□□□□ -0.36
CCDC85C-207ENST00000557769 NDUFB9Q9Y6M9 179 aa12.83□□□□□ -0.36
CCDC85C-207ENST00000557769 LRP6O75581 1613 aa12.83□□□□□ -0.36
CCDC85C-207ENST00000557769 RTL1A6NKG5 1358 aa12.82□□□□□ -0.36
CCDC85C-207ENST00000557769 RUFY3Q7L099 469 aa12.82□□□□□ -0.36
CCDC85C-207ENST00000557769 TMC6Q7Z403 805 aa12.82□□□□□ -0.36
CCDC85C-207ENST00000557769 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
CCDC85C-207ENST00000557769 UBXN4Q92575 508 aa12.82□□□□□ -0.36
CCDC85C-207ENST00000557769 OGFRQ9NZT2 677 aa12.82□□□□□ -0.36
CCDC85C-207ENST00000557769 KIF20AO95235 890 aa12.82□□□□□ -0.36
CCDC85C-207ENST00000557769 PTPN21Q16825 1174 aa12.82□□□□□ -0.36
CCDC85C-207ENST00000557769 ADCK5Q3MIX3 580 aa12.82□□□□□ -0.36
CCDC85C-207ENST00000557769 KIF1BPQ96EK5 621 aa12.82□□□□□ -0.36
CCDC85C-207ENST00000557769 PSMA5P28066 241 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 IL13P35225 146 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 CERS3Q8IU89 383 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 RBM8AQ9Y5S9 174 aaKnown RBP12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 PI4KAP2A4QPH2 592 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 CCDC69A6NI79 296 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 TTC6Q86TZ1 520 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 PI4KAP1Q8N8J0 262 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 ARHGEF10O15013 1369 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 NRAPQ86VF7 1730 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 PLCH1Q4KWH8 1693 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 ATP8B2P98198 1209 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 SYT10Q6XYQ8 523 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 AOPEPQ8N6M6 819 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 NOL10Q9BSC4 688 aaKnown RBP12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 IL25Q9H293 177 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 ST7Q9NRC1 585 aa12.81□□□□□ -0.36
CCDC85C-207ENST00000557769 PES1O00541 588 aaKnown RBP12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 PTH1RQ03431 593 aa12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 CHST3Q7LGC8 479 aa12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 PTPRCP08575 1304 aa12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 SMTNL1A8MU46 457 aa12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 SERPINC1P01008 464 aa12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 ANAPC15P60006 121 aa12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 STK38Q15208 465 aa12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 MTHFSDQ2M296 383 aaKnown RBP12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 CCDC34Q96HJ3 373 aa12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 ARGLU1Q9NWB6 273 aaPredicted RBP12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 ZSCAN31Q96LW9 406 aaPredicted RBP12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 FAM227BQ96M60 508 aa12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 SCAND2PQ9GZW5 306 aaPredicted RBP12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 DNAI1Q9UI46 699 aa12.8□□□□□ -0.36
CCDC85C-207ENST00000557769 JAK2O60674 1132 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 POLR3DP05423 398 aaPredicted RBP12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 SNW1Q13573 536 aaKnown RBP12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 CLEC17AQ6ZS10 378 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 CCAR1Q8IX12 1150 aaKnown RBP12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 TIGD1Q96MW7 591 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 KCNF1Q9H3M0 494 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 TOMM22Q9NS69 142 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 CPLX1O14810 134 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 GLRX3O76003 335 aaKnown RBP12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 ZSCAN25Q6NSZ9 544 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 CACTINQ8WUQ7 758 aaKnown RBP12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 BRF1Q92994 677 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 LRRC59Q96AG4 307 aaKnown RBP12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 TRIM34Q9BYJ4 488 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 COL3A1P02461 1466 aaPredicted RBP12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 NR1I2O75469 434 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 MYL6BP14649 208 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 ME3Q16798 604 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 CEP57L1Q8IYX8 460 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 ABTB2Q8N961 1025 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 RGPD1P0DJD0 1748 aa12.79□□□□□ -0.36
CCDC85C-207ENST00000557769 AATKQ6ZMQ8 1374 aa12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 SFPQP23246 707 aaKnown RBP eCLIP12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 ZNF75DP51815 510 aa12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 NCBP1Q09161 790 aaKnown RBP12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 EDC3Q96F86 508 aaKnown RBP12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 MTMR6Q9Y217 621 aa12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 ABCC6O95255 1503 aa12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 ERCC6LQ2NKX8 1250 aa12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 ARHGAP29Q52LW3 1261 aa12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 TMCO3Q6UWJ1 677 aa12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 CAMTA1Q9Y6Y1 1673 aa12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 HSP90AB4PQ58FF6 505 aa12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 KLHDC4Q8TBB5 520 aa12.78□□□□□ -0.36
CCDC85C-207ENST00000557769 AP5Z1O43299 807 aa12.77□□□□□ -0.36
CCDC85C-207ENST00000557769 NBPF7P0C2Y1 421 aaPredicted RBP12.77□□□□□ -0.36
CCDC85C-207ENST00000557769 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.36
CCDC85C-207ENST00000557769 HSPA4P34932 840 aa12.77□□□□□ -0.36
CCDC85C-207ENST00000557769 CUL4AQ13619 759 aa12.77□□□□□ -0.36
CCDC85C-207ENST00000557769 CFAP100Q494V2 611 aa12.77□□□□□ -0.36
CCDC85C-207ENST00000557769 RIC3Q7Z5B4 369 aa12.77□□□□□ -0.36
CCDC85C-207ENST00000557769 RGPD2P0DJD1 1756 aa12.77□□□□□ -0.36
CCDC85C-207ENST00000557769 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.37
CCDC85C-207ENST00000557769 SYNE3Q6ZMZ3 975 aa12.77□□□□□ -0.37
CCDC85C-207ENST00000557769 FTOQ9C0B1 505 aaKnown RBP eCLIP12.77□□□□□ -0.37
CCDC85C-207ENST00000557769 PAXBP1Q9Y5B6 917 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms