RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 FAM161AQ3B820 660 aa17.68■□□□□ 0.42
RIPK3-206ENST00000557624 RABL6Q3YEC7 729 aaPredicted RBP17.68■□□□□ 0.42
RIPK3-206ENST00000557624 AAMPQ13685 434 aa17.67■□□□□ 0.42
RIPK3-206ENST00000557624 CCDC152Q4G0S7 254 aa17.67■□□□□ 0.42
RIPK3-206ENST00000557624 CEP85Q6P2H3 762 aa17.67■□□□□ 0.42
RIPK3-206ENST00000557624 GREM2Q9H772 168 aa17.67■□□□□ 0.42
RIPK3-206ENST00000557624 PCDHB15Q9Y5E8 787 aa17.67■□□□□ 0.42
RIPK3-206ENST00000557624 SRGAP3O43295 1099 aa17.66■□□□□ 0.42
RIPK3-206ENST00000557624 CSF1RP07333 972 aa17.66■□□□□ 0.42
RIPK3-206ENST00000557624 SF3B3Q15393 1217 aaKnown RBP17.66■□□□□ 0.42
RIPK3-206ENST00000557624 RPGRQ92834 1020 aaKnown RBP17.66■□□□□ 0.42
RIPK3-206ENST00000557624 KIF13BQ9NQT8 1826 aa17.66■□□□□ 0.42
RIPK3-206ENST00000557624 PNMA6EA0A0J9YXQ4 647 aa17.65■□□□□ 0.42
RIPK3-206ENST00000557624 CRY2Q49AN0 593 aa17.65■□□□□ 0.42
RIPK3-206ENST00000557624 COL11A2P13942 1736 aaPredicted RBP17.65■□□□□ 0.42
RIPK3-206ENST00000557624 CHRNA5P30532 468 aa17.65■□□□□ 0.42
RIPK3-206ENST00000557624 C2CD5Q86YS7 1000 aa17.65■□□□□ 0.42
RIPK3-206ENST00000557624 TAF1P21675 1872 aa17.64■□□□□ 0.42
RIPK3-206ENST00000557624 KLRG2A4D1S0 409 aaPredicted RBP17.64■□□□□ 0.41
RIPK3-206ENST00000557624 H0YIN7 160 aa17.64■□□□□ 0.41
RIPK3-206ENST00000557624 ITGA6P23229 1130 aa17.64■□□□□ 0.41
RIPK3-206ENST00000557624 ATP8B2P98198 1209 aa17.64■□□□□ 0.41
RIPK3-206ENST00000557624 IFIT5Q13325 482 aaKnown RBP17.64■□□□□ 0.41
RIPK3-206ENST00000557624 MTX1Q13505 466 aa17.64■□□□□ 0.41
RIPK3-206ENST00000557624 CCDC57Q2TAC2 916 aa17.64■□□□□ 0.41
RIPK3-206ENST00000557624 RPAP2Q8IXW5 612 aaPredicted RBP17.64■□□□□ 0.41
RIPK3-206ENST00000557624 SEC31BQ9NQW1 1179 aa17.64■□□□□ 0.41
RIPK3-206ENST00000557624 SRGNP10124 158 aa17.63■□□□□ 0.41
RIPK3-206ENST00000557624 DDX46Q7L014 1031 aaKnown RBP17.63■□□□□ 0.41
RIPK3-206ENST00000557624 SIRT2Q8IXJ6 389 aa17.63■□□□□ 0.41
RIPK3-206ENST00000557624 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
RIPK3-206ENST00000557624 TAF7LQ5H9L4 462 aa17.62■□□□□ 0.41
RIPK3-206ENST00000557624 ZNF622Q969S3 477 aaKnown RBP eCLIP17.62■□□□□ 0.41
RIPK3-206ENST00000557624 CD2APQ9Y5K6 639 aa17.62■□□□□ 0.41
RIPK3-206ENST00000557624 RTL9Q8NET4 1388 aa17.62■□□□□ 0.41
RIPK3-206ENST00000557624 A0A0G2JLW4 131 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 HMMRO75330 724 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 NPR1P16066 1061 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 KLHDC4Q8TBB5 520 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 RBM17Q96I25 401 aaKnown RBP17.61■□□□□ 0.41
RIPK3-206ENST00000557624 ZNF594Q96JF6 807 aaPredicted RBP17.61■□□□□ 0.41
RIPK3-206ENST00000557624 SRCAPQ6ZRS2 3230 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 COL4A1P02462 1669 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 DPEP1P16444 411 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 SSH3Q8TE77 659 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 MASTLQ96GX5 879 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 CDC5LQ99459 802 aaKnown RBP17.61■□□□□ 0.41
RIPK3-206ENST00000557624 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 FHDC1Q9C0D6 1143 aaPredicted RBP17.61■□□□□ 0.41
RIPK3-206ENST00000557624 PDZRN3Q9UPQ7 1066 aa17.61■□□□□ 0.41
RIPK3-206ENST00000557624 PA2G4Q9UQ80 394 aaKnown RBP17.61■□□□□ 0.41
RIPK3-206ENST00000557624 CACNA1SQ13698 1873 aa17.6■□□□□ 0.41
RIPK3-206ENST00000557624 HOXA10P31260 410 aaPredicted RBP17.6■□□□□ 0.41
RIPK3-206ENST00000557624 RFX5P48382 616 aaPredicted RBP17.6■□□□□ 0.41
RIPK3-206ENST00000557624 POLA2Q14181 598 aa17.6■□□□□ 0.41
RIPK3-206ENST00000557624 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
RIPK3-206ENST00000557624 KIAA1551Q9HCM1 1747 aa17.6■□□□□ 0.41
RIPK3-206ENST00000557624 TGFB2P61812 414 aa17.59■□□□□ 0.41
RIPK3-206ENST00000557624 ERICH6BQ5W0A0 696 aa17.59■□□□□ 0.41
RIPK3-206ENST00000557624 ANKRD18AQ8IVF6 992 aa17.59■□□□□ 0.41
RIPK3-206ENST00000557624 SIL1Q9H173 461 aa17.59■□□□□ 0.41
RIPK3-206ENST00000557624 WWC3Q9ULE0 1092 aa17.59■□□□□ 0.41
RIPK3-206ENST00000557624 DLEC1Q9Y238 1755 aa17.59■□□□□ 0.41
RIPK3-206ENST00000557624 IGHMBP2P38935 993 aaKnown RBP17.58■□□□□ 0.41
RIPK3-206ENST00000557624 PTPN12Q05209 780 aaKnown RBP17.58■□□□□ 0.41
RIPK3-206ENST00000557624 GRAPQ13588 217 aa17.58■□□□□ 0.41
RIPK3-206ENST00000557624 STYK1Q6J9G0 422 aa17.58■□□□□ 0.41
RIPK3-206ENST00000557624 NLGN2Q8NFZ4 835 aa17.58■□□□□ 0.41
RIPK3-206ENST00000557624 GRAPLQ8TC17 118 aaPredicted RBP17.58■□□□□ 0.41
RIPK3-206ENST00000557624 CRAMP1Q96RY5 1269 aa17.58■□□□□ 0.41
RIPK3-206ENST00000557624 LRP5O75197 1615 aa17.58■□□□□ 0.4
RIPK3-206ENST00000557624 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.4
RIPK3-206ENST00000557624 MPHOSPH8Q99549 860 aa17.58■□□□□ 0.4
RIPK3-206ENST00000557624 SURF6O75683 361 aaKnown RBP17.57■□□□□ 0.4
RIPK3-206ENST00000557624 KCNA3P22001 575 aa17.57■□□□□ 0.4
RIPK3-206ENST00000557624 ALDH1B1P30837 517 aa17.57■□□□□ 0.4
RIPK3-206ENST00000557624 HDAC1Q13547 482 aaPredicted RBP17.57■□□□□ 0.4
RIPK3-206ENST00000557624 LDHAL6AQ6ZMR3 332 aa17.57■□□□□ 0.4
RIPK3-206ENST00000557624 RWDD1Q9H446 243 aaPredicted RBP17.57■□□□□ 0.4
RIPK3-206ENST00000557624 COPRSQ9NQ92 184 aa17.57■□□□□ 0.4
RIPK3-206ENST00000557624 EXOC6BQ9Y2D4 811 aa17.57■□□□□ 0.4
RIPK3-206ENST00000557624 CNKSR1Q969H4 720 aa17.56■□□□□ 0.4
RIPK3-206ENST00000557624 CCDC136Q96JN2 1154 aa17.56■□□□□ 0.4
RIPK3-206ENST00000557624 PUS3Q9BZE2 481 aaKnown RBP17.56■□□□□ 0.4
RIPK3-206ENST00000557624 SLX4Q8IY92 1834 aa17.55■□□□□ 0.4
RIPK3-206ENST00000557624 IGHDP01880 384 aa17.55■□□□□ 0.4
RIPK3-206ENST00000557624 OS9Q13438 667 aaPredicted RBP17.55■□□□□ 0.4
RIPK3-206ENST00000557624 PRPF40BQ6NWY9 871 aaKnown RBP17.55■□□□□ 0.4
RIPK3-206ENST00000557624 CNNM1Q9NRU3 951 aa17.55■□□□□ 0.4
RIPK3-206ENST00000557624 PPP4R2Q9NY27 417 aa17.55■□□□□ 0.4
RIPK3-206ENST00000557624 APBB1O00213 710 aa17.54■□□□□ 0.4
RIPK3-206ENST00000557624 PPEF1O14829 653 aaPredicted RBP17.54■□□□□ 0.4
RIPK3-206ENST00000557624 BBOX1O75936 387 aa17.54■□□□□ 0.4
RIPK3-206ENST00000557624 LRRC24Q50LG9 513 aa17.54■□□□□ 0.4
RIPK3-206ENST00000557624 SLC51AQ86UW1 340 aa17.54■□□□□ 0.4
RIPK3-206ENST00000557624 TTLL6Q8N841 843 aa17.54■□□□□ 0.4
RIPK3-206ENST00000557624 SYT17Q9BSW7 474 aa17.54■□□□□ 0.4
RIPK3-206ENST00000557624 PIM2Q9P1W9 311 aa17.54■□□□□ 0.4
RIPK3-206ENST00000557624 BRCA1P38398 1863 aaKnown RBP17.54■□□□□ 0.4
RIPK3-206ENST00000557624 EYA2O00167 538 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms