RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 DNAJC25Q9H1X3 360 aa7.7□□□□□ -1.18
PRPF39-212ENST00000557477 CNTN3Q9P232 1028 aa7.7□□□□□ -1.18
PRPF39-212ENST00000557477 PPFIA3O75145 1194 aa7.69□□□□□ -1.18
PRPF39-212ENST00000557477 PHACTR2O75167 634 aa7.69□□□□□ -1.18
PRPF39-212ENST00000557477 SASH3O75995 380 aa7.69□□□□□ -1.18
PRPF39-212ENST00000557477 RECKO95980 971 aa7.69□□□□□ -1.18
PRPF39-212ENST00000557477 CD33P20138 364 aa7.69□□□□□ -1.18
PRPF39-212ENST00000557477 ALG1LQ6GMV1 187 aa7.69□□□□□ -1.18
PRPF39-212ENST00000557477 LOC100996750A0A140TA64 210 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 CDC14CA4D256 554 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 NEFLP07196 543 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 VAMP1P23763 118 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 TARSP26639 723 aaKnown RBP7.68□□□□□ -1.18
PRPF39-212ENST00000557477 IRS1P35568 1242 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 XPCQ01831 940 aaPredicted RBP7.68□□□□□ -1.18
PRPF39-212ENST00000557477 CCINQ13939 588 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 MRPL58Q14197 206 aaKnown RBP7.68□□□□□ -1.18
PRPF39-212ENST00000557477 RAB44Q7Z6P3 723 aaPredicted RBP7.68□□□□□ -1.18
PRPF39-212ENST00000557477 C1orf127Q8N9H9 656 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 KRTAP4-6Q9BYQ5 205 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 GSX2Q9BZM3 304 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 ZFYVE28Q9HCC9 887 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 C11orf16Q9NQ32 467 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 IGSF5Q9NSI5 407 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 ABI2Q9NYB9 513 aaPredicted RBP7.68□□□□□ -1.18
PRPF39-212ENST00000557477 ZFATQ9P243 1243 aa7.68□□□□□ -1.18
PRPF39-212ENST00000557477 GPR25O00155 361 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 EREGO14944 169 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 CYP2E1P05181 493 aaPredicted RBP7.67□□□□□ -1.18
PRPF39-212ENST00000557477 POLR3DP05423 398 aaPredicted RBP7.67□□□□□ -1.18
PRPF39-212ENST00000557477 VEGFBP49765 207 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 DAB2P98082 770 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 FGD1P98174 961 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 LAMC2Q13753 1193 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 PI16Q6UXB8 463 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 TMC4Q7Z404 712 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 FBF1Q8TES7 1133 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 CCDC74AQ96AQ1 378 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 SLC30A3Q99726 388 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 MARK1Q9P0L2 795 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 NXF1Q9UBU9 619 aaKnown RBP7.67□□□□□ -1.18
PRPF39-212ENST00000557477 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.67□□□□□ -1.18
PRPF39-212ENST00000557477 NISCHQ9Y2I1 1504 aa7.67□□□□□ -1.18
PRPF39-212ENST00000557477 MMP20O60882 483 aa7.66□□□□□ -1.18
PRPF39-212ENST00000557477 GNA15P30679 374 aa7.66□□□□□ -1.18
PRPF39-212ENST00000557477 SPEM2Q0P670 501 aa7.66□□□□□ -1.18
PRPF39-212ENST00000557477 PSMD2Q13200 908 aa7.66□□□□□ -1.18
PRPF39-212ENST00000557477 TSNAXIP1Q2TAA8 658 aa7.66□□□□□ -1.18
PRPF39-212ENST00000557477 VWA5B2Q8N398 1253 aa7.66□□□□□ -1.18
PRPF39-212ENST00000557477 EPS8L3Q8TE67 593 aaKnown RBP7.66□□□□□ -1.18
PRPF39-212ENST00000557477 GMCL1Q96IK5 515 aa7.66□□□□□ -1.18
PRPF39-212ENST00000557477 NPHS2Q9NP85 383 aa7.66□□□□□ -1.18
PRPF39-212ENST00000557477 ATXN7L1Q9ULK2 861 aaPredicted RBP7.66□□□□□ -1.18
PRPF39-212ENST00000557477 RARAP10276 462 aa7.65□□□□□ -1.18
PRPF39-212ENST00000557477 NFKB1P19838 968 aa7.65□□□□□ -1.18
PRPF39-212ENST00000557477 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.65□□□□□ -1.18
PRPF39-212ENST00000557477 TTC39BQ5VTQ0 682 aaPredicted RBP7.65□□□□□ -1.18
PRPF39-212ENST00000557477 MRS2Q9HD23 443 aa7.65□□□□□ -1.18
PRPF39-212ENST00000557477 KANSL3Q9P2N6 904 aa7.65□□□□□ -1.18
PRPF39-212ENST00000557477 SORBS3O60504 671 aa7.64□□□□□ -1.19
PRPF39-212ENST00000557477 FGFR3P22607 806 aa7.64□□□□□ -1.19
PRPF39-212ENST00000557477 CES1P23141 567 aa7.64□□□□□ -1.19
PRPF39-212ENST00000557477 LDLRAD1Q5T700 205 aa7.64□□□□□ -1.19
PRPF39-212ENST00000557477 FOXR1Q6PIV2 292 aa7.64□□□□□ -1.19
PRPF39-212ENST00000557477 SV2AQ7L0J3 742 aa7.64□□□□□ -1.19
PRPF39-212ENST00000557477 BHMTQ93088 406 aa7.64□□□□□ -1.19
PRPF39-212ENST00000557477 PNMA5Q96PV4 448 aa7.64□□□□□ -1.19
PRPF39-212ENST00000557477 BACH2Q9BYV9 841 aa7.64□□□□□ -1.19
PRPF39-212ENST00000557477 BCL11AQ9H165 835 aa7.64□□□□□ -1.19
PRPF39-212ENST00000557477 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.64□□□□□ -1.19
PRPF39-212ENST00000557477 CTBSQ01459 385 aa7.63□□□□□ -1.19
PRPF39-212ENST00000557477 OR13H1Q8NG92 308 aa7.63□□□□□ -1.19
PRPF39-212ENST00000557477 VTI1BQ9UEU0 232 aa7.63□□□□□ -1.19
PRPF39-212ENST00000557477 TCF3P15923 654 aa7.62□□□□□ -1.19
PRPF39-212ENST00000557477 GALNT12Q8IXK2 581 aa7.62□□□□□ -1.19
PRPF39-212ENST00000557477 TRERF1Q96PN7 1200 aa7.62□□□□□ -1.19
PRPF39-212ENST00000557477 OSBPL7Q9BZF2 842 aa7.62□□□□□ -1.19
PRPF39-212ENST00000557477 LATS2Q9NRM7 1088 aa7.62□□□□□ -1.19
PRPF39-212ENST00000557477 PHF24Q9UPV7 400 aa7.62□□□□□ -1.19
PRPF39-212ENST00000557477 SPG7Q9UQ90 795 aa7.62□□□□□ -1.19
PRPF39-212ENST00000557477 H3BM21 787 aa7.61□□□□□ -1.19
PRPF39-212ENST00000557477 FAM182BQ5T319 152 aa7.61□□□□□ -1.19
PRPF39-212ENST00000557477 LCE2CQ5TA81 110 aa7.61□□□□□ -1.19
PRPF39-212ENST00000557477 COL13A1Q5TAT6 717 aaPredicted RBP7.61□□□□□ -1.19
PRPF39-212ENST00000557477 NPAS3Q8IXF0 933 aa7.61□□□□□ -1.19
PRPF39-212ENST00000557477 NANOS1Q8WY41 292 aaKnown RBP7.61□□□□□ -1.19
PRPF39-212ENST00000557477 NLRP2Q9NX02 1062 aa7.61□□□□□ -1.19
PRPF39-212ENST00000557477 TLR7Q9NYK1 1049 aaKnown RBP7.61□□□□□ -1.19
PRPF39-212ENST00000557477 AK5Q9Y6K8 562 aa7.61□□□□□ -1.19
PRPF39-212ENST00000557477 PHF20L1A8MW92 1017 aa7.6□□□□□ -1.19
PRPF39-212ENST00000557477 C2CD2LO14523 706 aa7.6□□□□□ -1.19
PRPF39-212ENST00000557477 TERTO14746 1132 aaKnown RBP7.6□□□□□ -1.19
PRPF39-212ENST00000557477 MAP3K6O95382 1288 aa7.6□□□□□ -1.19
PRPF39-212ENST00000557477 PSAPP07602 524 aa7.6□□□□□ -1.19
PRPF39-212ENST00000557477 CTSHP09668 335 aa7.6□□□□□ -1.19
PRPF39-212ENST00000557477 PEAR1Q5VY43 1037 aaPredicted RBP7.6□□□□□ -1.19
PRPF39-212ENST00000557477 SLC16A10Q8TF71 515 aa7.6□□□□□ -1.19
PRPF39-212ENST00000557477 GADD45BO75293 160 aaPredicted RBP7.59□□□□□ -1.19
PRPF39-212ENST00000557477 ACPPP15309 386 aa7.59□□□□□ -1.19
PRPF39-212ENST00000557477 SOX18P35713 384 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms