RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 BCL2L13Q9BXK5 485 aa16.16■□□□□ 0.18
RTN1-208ENST00000557422 TNRC18O15417 2968 aaPredicted RBP16.16■□□□□ 0.18
RTN1-208ENST00000557422 ABCC4O15439 1325 aa16.16■□□□□ 0.18
RTN1-208ENST00000557422 BBOX1O75936 387 aa16.15■□□□□ 0.18
RTN1-208ENST00000557422 RAD17O75943 681 aa16.15■□□□□ 0.18
RTN1-208ENST00000557422 KIAA2012Q0VF49 1180 aa16.15■□□□□ 0.18
RTN1-208ENST00000557422 TNIP1Q15025 636 aa16.15■□□□□ 0.18
RTN1-208ENST00000557422 DPP8Q6V1X1 898 aaPredicted RBP16.15■□□□□ 0.18
RTN1-208ENST00000557422 USP48Q86UV5 1035 aa16.15■□□□□ 0.18
RTN1-208ENST00000557422 SP8Q8IXZ3 490 aa16.15■□□□□ 0.18
RTN1-208ENST00000557422 UTP14AQ9BVJ6 771 aaKnown RBP16.15■□□□□ 0.18
RTN1-208ENST00000557422 CNOT7Q9UIV1 285 aaKnown RBP16.15■□□□□ 0.18
RTN1-208ENST00000557422 SHTN1A0MZ66 631 aa16.14■□□□□ 0.17
RTN1-208ENST00000557422 HUNKP57058 714 aa16.14■□□□□ 0.17
RTN1-208ENST00000557422 MPNDQ8N594 471 aa16.14■□□□□ 0.17
RTN1-208ENST00000557422 YDJCA8MPS7 323 aa16.13■□□□□ 0.17
RTN1-208ENST00000557422 H7C1D1 291 aa16.13■□□□□ 0.17
RTN1-208ENST00000557422 DLK2Q6UY11 383 aa16.13■□□□□ 0.17
RTN1-208ENST00000557422 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
RTN1-208ENST00000557422 DLG5Q8TDM6 1919 aa16.12■□□□□ 0.17
RTN1-208ENST00000557422 LRP10Q7Z4F1 713 aa16.12■□□□□ 0.17
RTN1-208ENST00000557422 THUMPD2Q9BTF0 503 aaKnown RBP16.12■□□□□ 0.17
RTN1-208ENST00000557422 HCLS1P14317 486 aaPredicted RBP16.11■□□□□ 0.17
RTN1-208ENST00000557422 MICALL2Q8IY33 904 aa16.11■□□□□ 0.17
RTN1-208ENST00000557422 FAM155AB1AL88 458 aaPredicted RBP16.1■□□□□ 0.17
RTN1-208ENST00000557422 PDIA6Q15084 440 aa16.1■□□□□ 0.17
RTN1-208ENST00000557422 RGMBQ6NW40 437 aa16.1■□□□□ 0.17
RTN1-208ENST00000557422 ZBTB12Q9Y330 459 aaPredicted RBP16.1■□□□□ 0.17
RTN1-208ENST00000557422 LAMB2P55268 1798 aa16.1■□□□□ 0.17
RTN1-208ENST00000557422 NEFMP07197 916 aa16.09■□□□□ 0.17
RTN1-208ENST00000557422 DDX46Q7L014 1031 aaKnown RBP16.09■□□□□ 0.17
RTN1-208ENST00000557422 SAMD7Q7Z3H4 446 aa16.09■□□□□ 0.17
RTN1-208ENST00000557422 KRT26Q7Z3Y9 468 aa16.09■□□□□ 0.17
RTN1-208ENST00000557422 DPF2Q92785 391 aa16.09■□□□□ 0.17
RTN1-208ENST00000557422 SAGE1Q9NXZ1 904 aa16.09■□□□□ 0.17
RTN1-208ENST00000557422 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.17
RTN1-208ENST00000557422 POLR2AP24928 1970 aaKnown RBP16.08■□□□□ 0.16
RTN1-208ENST00000557422 KIF23Q02241 960 aaPredicted RBP16.08■□□□□ 0.16
RTN1-208ENST00000557422 GRAPQ13588 217 aa16.08■□□□□ 0.16
RTN1-208ENST00000557422 NFE2L2Q16236 605 aa16.08■□□□□ 0.16
RTN1-208ENST00000557422 PROSER3Q2NL68 480 aa16.08■□□□□ 0.16
RTN1-208ENST00000557422 NLRP10Q86W26 655 aa16.08■□□□□ 0.16
RTN1-208ENST00000557422 GRAPLQ8TC17 118 aaPredicted RBP16.08■□□□□ 0.16
RTN1-208ENST00000557422 CCDC102AQ96A19 550 aa16.08■□□□□ 0.16
RTN1-208ENST00000557422 PLEKHF1Q96S99 279 aa16.08■□□□□ 0.16
RTN1-208ENST00000557422 GBA2Q9HCG7 927 aaPredicted RBP16.08■□□□□ 0.16
RTN1-208ENST00000557422 PSMD14O00487 310 aa16.07■□□□□ 0.16
RTN1-208ENST00000557422 EGFRP00533 1210 aa16.07■□□□□ 0.16
RTN1-208ENST00000557422 ANXA1P04083 346 aa16.07■□□□□ 0.16
RTN1-208ENST00000557422 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
RTN1-208ENST00000557422 SOX10P56693 466 aa16.07■□□□□ 0.16
RTN1-208ENST00000557422 TBC1D10BQ4KMP7 808 aaPredicted RBP16.07■□□□□ 0.16
RTN1-208ENST00000557422 C2orf69Q8N8R5 385 aa16.07■□□□□ 0.16
RTN1-208ENST00000557422 RNF186Q9NXI6 227 aa16.07■□□□□ 0.16
RTN1-208ENST00000557422 DUOX1Q9NRD9 1551 aa16.07■□□□□ 0.16
RTN1-208ENST00000557422 TAF1P21675 1872 aa16.07■□□□□ 0.16
RTN1-208ENST00000557422 TRPA1O75762 1119 aa16.06■□□□□ 0.16
RTN1-208ENST00000557422 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
RTN1-208ENST00000557422 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
RTN1-208ENST00000557422 TRMT112Q9UI30 125 aaKnown RBP16.06■□□□□ 0.16
RTN1-208ENST00000557422 ADM5C9JUS6 153 aa16.05■□□□□ 0.16
RTN1-208ENST00000557422 WASHC4Q2M389 1173 aa16.05■□□□□ 0.16
RTN1-208ENST00000557422 HSP90AB3PQ58FF7 597 aa16.05■□□□□ 0.16
RTN1-208ENST00000557422 COPS6Q7L5N1 327 aa16.05■□□□□ 0.16
RTN1-208ENST00000557422 DCPSQ96C86 337 aaKnown RBP16.05■□□□□ 0.16
RTN1-208ENST00000557422 DBNDD1Q9H9R9 158 aa16.05■□□□□ 0.16
RTN1-208ENST00000557422 TSPYL4Q9UJ04 414 aa16.05■□□□□ 0.16
RTN1-208ENST00000557422 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
RTN1-208ENST00000557422 TCIRG1Q13488 830 aa16.04■□□□□ 0.16
RTN1-208ENST00000557422 RBM26Q5T8P6 1007 aaKnown RBP16.04■□□□□ 0.16
RTN1-208ENST00000557422 CSRNP1Q96S65 589 aa16.04■□□□□ 0.16
RTN1-208ENST00000557422 KCNQ5Q9NR82 932 aa16.04■□□□□ 0.16
RTN1-208ENST00000557422 LRRC37AA6NMS7 1700 aa16.03■□□□□ 0.16
RTN1-208ENST00000557422 RIMBP2O15034 1052 aa16.03■□□□□ 0.16
RTN1-208ENST00000557422 RPS12P25398 132 aaKnown RBP16.03■□□□□ 0.16
RTN1-208ENST00000557422 AIMP1Q12904 312 aaKnown RBP16.03■□□□□ 0.16
RTN1-208ENST00000557422 XAGE3Q8WTP9 111 aa16.03■□□□□ 0.16
RTN1-208ENST00000557422 NSFL1CQ9UNZ2 370 aaKnown RBP16.03■□□□□ 0.16
RTN1-208ENST00000557422 AKAP11Q9UKA4 1901 aa16.03■□□□□ 0.16
RTN1-208ENST00000557422 C6orf229H3BNL8 230 aa16.02■□□□□ 0.16
RTN1-208ENST00000557422 SLC10A3P09131 477 aa16.02■□□□□ 0.16
RTN1-208ENST00000557422 CTU1Q7Z7A3 348 aaKnown RBP16.02■□□□□ 0.16
RTN1-208ENST00000557422 POLLQ9UGP5 575 aa16.02■□□□□ 0.16
RTN1-208ENST00000557422 RTL9Q8NET4 1388 aa16.01■□□□□ 0.15
RTN1-208ENST00000557422 ECE2O60344 883 aa16.01■□□□□ 0.15
RTN1-208ENST00000557422 GPSM2P81274 684 aa16.01■□□□□ 0.15
RTN1-208ENST00000557422 DOK7Q18PE1 504 aa16.01■□□□□ 0.15
RTN1-208ENST00000557422 NECTIN2Q92692 538 aa16.01■□□□□ 0.15
RTN1-208ENST00000557422 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
RTN1-208ENST00000557422 ZNF428Q96B54 188 aa16.01■□□□□ 0.15
RTN1-208ENST00000557422 PRPF38BQ5VTL8 546 aaKnown RBP16■□□□□ 0.15
RTN1-208ENST00000557422 SULF1Q8IWU6 871 aa16■□□□□ 0.15
RTN1-208ENST00000557422 PNNQ9H307 717 aaKnown RBP16■□□□□ 0.15
RTN1-208ENST00000557422 ASTN2O75129 1339 aaPredicted RBP15.99■□□□□ 0.15
RTN1-208ENST00000557422 MAPK8IP3Q9UPT6 1336 aa15.99■□□□□ 0.15
RTN1-208ENST00000557422 VIL1P09327 827 aaKnown RBP15.99■□□□□ 0.15
RTN1-208ENST00000557422 SF3B3Q15393 1217 aaKnown RBP15.99■□□□□ 0.15
RTN1-208ENST00000557422 KIF4BQ2VIQ3 1234 aa15.99■□□□□ 0.15
RTN1-208ENST00000557422 CDCA5Q96FF9 252 aa15.99■□□□□ 0.15
RTN1-208ENST00000557422 BABAM1Q9NWV8 329 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms