RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 PDIA6Q15084 440 aa18.2■□□□□ 0.5
TMEM55B-207ENST00000557041 SF3A1Q15459 793 aaKnown RBP18.2■□□□□ 0.5
TMEM55B-207ENST00000557041 Q6ZUG5 572 aa18.2■□□□□ 0.5
TMEM55B-207ENST00000557041 DNAJC10Q8IXB1 793 aa18.2■□□□□ 0.5
TMEM55B-207ENST00000557041 JAK2O60674 1132 aa18.2■□□□□ 0.5
TMEM55B-207ENST00000557041 SYNE4Q8N205 404 aa18.2■□□□□ 0.5
TMEM55B-207ENST00000557041 ACSBG1Q96GR2 724 aa18.2■□□□□ 0.5
TMEM55B-207ENST00000557041 AOX1Q06278 1338 aa18.2■□□□□ 0.5
TMEM55B-207ENST00000557041 GTF2E1P29083 439 aaPredicted RBP18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 KIAA2012Q0VF49 1180 aa18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 COL9A3Q14050 684 aaPredicted RBP18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 SPATA32Q96LK8 384 aa18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 BTG4Q9NY30 223 aa18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 CPLX1O14810 134 aa18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 PTPN12Q05209 780 aaKnown RBP18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 CHMP4CQ96CF2 233 aa18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 SLAIN2Q9P270 581 aa18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 ASAP1Q9ULH1 1129 aa18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 LDHAL6AQ6ZMR3 332 aa18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 PLBD2Q8NHP8 589 aa18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 ERBB4Q15303 1308 aa18.19■□□□□ 0.5
TMEM55B-207ENST00000557041 CUL4AQ13619 759 aa18.18■□□□□ 0.5
TMEM55B-207ENST00000557041 SH2B1Q9NRF2 756 aaPredicted RBP18.18■□□□□ 0.5
TMEM55B-207ENST00000557041 TRMT112Q9UI30 125 aaKnown RBP18.18■□□□□ 0.5
TMEM55B-207ENST00000557041 KIF13AQ9H1H9 1805 aa18.18■□□□□ 0.5
TMEM55B-207ENST00000557041 IFIT5Q13325 482 aaKnown RBP18.18■□□□□ 0.5
TMEM55B-207ENST00000557041 NCOA5Q9HCD5 579 aaKnown RBP18.18■□□□□ 0.5
TMEM55B-207ENST00000557041 ARHGAP23Q9P227 1491 aa18.18■□□□□ 0.5
TMEM55B-207ENST00000557041 CDC37L1Q7L3B6 337 aa18.18■□□□□ 0.5
TMEM55B-207ENST00000557041 ZSCAN30Q86W11 494 aa18.18■□□□□ 0.5
TMEM55B-207ENST00000557041 NCOA3Q9Y6Q9 1424 aa18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 A0A1B0GUL7 405 aa18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 PDCP20941 246 aa18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 RRP12Q5JTH9 1297 aaKnown RBP18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 VPS53Q5VIR6 699 aa18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 RALYLQ86SE5 291 aaKnown RBP18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 PAG1Q9NWQ8 432 aa18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 APOBRQ0VD83 1088 aa18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 CYP2E1P05181 493 aaPredicted RBP18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 ANKRD1Q15327 319 aa18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 MCMDC2Q4G0Z9 681 aa18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 IQSEC3Q9UPP2 1182 aaPredicted RBP18.17■□□□□ 0.5
TMEM55B-207ENST00000557041 RBM10P98175 930 aaKnown RBP18.16■□□□□ 0.5
TMEM55B-207ENST00000557041 TTLL5Q6EMB2 1281 aa18.16■□□□□ 0.5
TMEM55B-207ENST00000557041 KNDC1Q76NI1 1749 aa18.16■□□□□ 0.5
TMEM55B-207ENST00000557041 STARD3NLO95772 234 aa18.16■□□□□ 0.5
TMEM55B-207ENST00000557041 PI16Q6UXB8 463 aa18.16■□□□□ 0.5
TMEM55B-207ENST00000557041 BICDL1Q6ZP65 573 aa18.16■□□□□ 0.5
TMEM55B-207ENST00000557041 NBPF26B4DH59 902 aa18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 NBPF14Q5TI25 921 aa18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 NBPF10Q6P3W6 841 aaKnown RBP18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 CCDC82Q8N4S0 544 aa18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 NBPF15Q8N660 670 aa18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 SLIT1O75093 1534 aa18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 CCDC144CPQ8IYA2 1237 aa18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 CCDC183Q5T5S1 534 aa18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 BRINP3Q76B58 766 aa18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 FAM13BQ9NYF5 915 aa18.15■□□□□ 0.5
TMEM55B-207ENST00000557041 C1orf167Q5SNV9 1468 aa18.14■□□□□ 0.5
TMEM55B-207ENST00000557041 ZNF335Q9H4Z2 1342 aaPredicted RBP18.14■□□□□ 0.5
TMEM55B-207ENST00000557041 PIP4K2BP78356 416 aa18.14■□□□□ 0.5
TMEM55B-207ENST00000557041 CLCN1P35523 988 aa18.14■□□□□ 0.49
TMEM55B-207ENST00000557041 ZNF445P59923 1031 aa18.14■□□□□ 0.49
TMEM55B-207ENST00000557041 UBE2HP62256 183 aa18.14■□□□□ 0.49
TMEM55B-207ENST00000557041 TNMDQ9H2S6 317 aa18.14■□□□□ 0.49
TMEM55B-207ENST00000557041 MTX1Q13505 466 aa18.14■□□□□ 0.49
TMEM55B-207ENST00000557041 NFXL1Q6ZNB6 911 aa18.14■□□□□ 0.49
TMEM55B-207ENST00000557041 MAP4K1Q92918 833 aa18.14■□□□□ 0.49
TMEM55B-207ENST00000557041 ATP2B1P20020 1258 aa18.13■□□□□ 0.49
TMEM55B-207ENST00000557041 TRDNQ13061 729 aa18.13■□□□□ 0.49
TMEM55B-207ENST00000557041 ZSWIM6Q9HCJ5 1215 aa18.13■□□□□ 0.49
TMEM55B-207ENST00000557041 PIK3C2AO00443 1686 aa18.13■□□□□ 0.49
TMEM55B-207ENST00000557041 RXRAP19793 462 aa18.13■□□□□ 0.49
TMEM55B-207ENST00000557041 RPS6KB1P23443 525 aa18.13■□□□□ 0.49
TMEM55B-207ENST00000557041 ME1P48163 572 aa18.13■□□□□ 0.49
TMEM55B-207ENST00000557041 KRT32Q14532 448 aa18.13■□□□□ 0.49
TMEM55B-207ENST00000557041 NECTIN1Q15223 517 aa18.13■□□□□ 0.49
TMEM55B-207ENST00000557041 U3KPZ7 1027 aaPredicted RBP18.13■□□□□ 0.49
TMEM55B-207ENST00000557041 PCDH11XQ9BZA7 1347 aa18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 PCDH11YQ9BZA8 1340 aa18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 TAF5LO75529 589 aa18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 ADORA1P30542 326 aa18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 OTUD7BQ6GQQ9 843 aa18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 TTC12Q9H892 705 aaPredicted RBP18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 POLR3DP05423 398 aaPredicted RBP18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 NUP62CLQ9H1M0 184 aa18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 DACT1Q9NYF0 836 aa18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 MTMR6Q9Y217 621 aa18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 FER1L4A9Z1Z3 1794 aa18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 AKAP12Q02952 1782 aa18.12■□□□□ 0.49
TMEM55B-207ENST00000557041 IL15P40933 162 aaPredicted RBP18.11■□□□□ 0.49
TMEM55B-207ENST00000557041 SASS6Q6UVJ0 657 aa18.11■□□□□ 0.49
TMEM55B-207ENST00000557041 SNAP23O00161 211 aa18.11■□□□□ 0.49
TMEM55B-207ENST00000557041 EYA2O00167 538 aa18.11■□□□□ 0.49
TMEM55B-207ENST00000557041 COPRSQ9NQ92 184 aa18.11■□□□□ 0.49
TMEM55B-207ENST00000557041 ATP5JP18859 108 aa18.11■□□□□ 0.49
TMEM55B-207ENST00000557041 TTC14Q96N46 770 aa18.11■□□□□ 0.49
TMEM55B-207ENST00000557041 ADCY5O95622 1261 aa18.1■□□□□ 0.49
TMEM55B-207ENST00000557041 CYP21A2P08686 494 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms