RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 BRCA2P51587 3418 aa16.82■□□□□ 0.28
PSEN1-219ENST00000556951 RIC1Q4ADV7 1423 aa16.81■□□□□ 0.28
PSEN1-219ENST00000556951 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
PSEN1-219ENST00000556951 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
PSEN1-219ENST00000556951 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
PSEN1-219ENST00000556951 NGEFQ8N5V2 710 aa16.81■□□□□ 0.28
PSEN1-219ENST00000556951 KIAA0100Q14667 2235 aaKnown RBP16.81■□□□□ 0.28
PSEN1-219ENST00000556951 MAP3K15Q6ZN16 1313 aa16.8■□□□□ 0.28
PSEN1-219ENST00000556951 ZNF34Q8IZ26 560 aa16.8■□□□□ 0.28
PSEN1-219ENST00000556951 RPGRQ92834 1020 aaKnown RBP16.8■□□□□ 0.28
PSEN1-219ENST00000556951 COL25A1Q9BXS0 654 aaPredicted RBP16.8■□□□□ 0.28
PSEN1-219ENST00000556951 CCER2I3L3R5 266 aa16.79■□□□□ 0.28
PSEN1-219ENST00000556951 PPEF1O14829 653 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-219ENST00000556951 HTATSF1O43719 755 aaKnown RBP16.79■□□□□ 0.28
PSEN1-219ENST00000556951 GPTP24298 496 aa16.79■□□□□ 0.28
PSEN1-219ENST00000556951 AOC3Q16853 763 aa16.79■□□□□ 0.28
PSEN1-219ENST00000556951 CDC37L1Q7L3B6 337 aa16.79■□□□□ 0.28
PSEN1-219ENST00000556951 NIM1KQ8IY84 436 aa16.79■□□□□ 0.28
PSEN1-219ENST00000556951 RTF1Q92541 710 aaKnown RBP16.79■□□□□ 0.28
PSEN1-219ENST00000556951 RBM17Q96I25 401 aaKnown RBP16.79■□□□□ 0.28
PSEN1-219ENST00000556951 NUP98P52948 1817 aa16.79■□□□□ 0.28
PSEN1-219ENST00000556951 PPIP5K2O43314 1243 aa16.78■□□□□ 0.28
PSEN1-219ENST00000556951 NTSR2O95665 410 aa16.78■□□□□ 0.28
PSEN1-219ENST00000556951 GMPSP49915 693 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-219ENST00000556951 ZNF157P51786 506 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-219ENST00000556951 INTS3Q68E01 1043 aaKnown RBP16.78■□□□□ 0.28
PSEN1-219ENST00000556951 REM2Q8IYK8 340 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-219ENST00000556951 RTFDC1Q9BY42 306 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-219ENST00000556951 VPS33BQ9H267 617 aa16.78■□□□□ 0.28
PSEN1-219ENST00000556951 ZNRF3Q9ULT6 936 aa16.78■□□□□ 0.28
PSEN1-219ENST00000556951 IBTKQ9P2D0 1353 aaPredicted RBP16.77■□□□□ 0.28
PSEN1-219ENST00000556951 DLK2Q6UY11 383 aa16.77■□□□□ 0.28
PSEN1-219ENST00000556951 ZC3H15Q8WU90 426 aaKnown RBP16.77■□□□□ 0.28
PSEN1-219ENST00000556951 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.28
PSEN1-219ENST00000556951 ATP6V0A2Q9Y487 856 aa16.77■□□□□ 0.28
PSEN1-219ENST00000556951 H0YGN5 161 aa16.76■□□□□ 0.27
PSEN1-219ENST00000556951 SLC10A3P09131 477 aa16.76■□□□□ 0.27
PSEN1-219ENST00000556951 SLC10A5Q5PT55 438 aa16.76■□□□□ 0.27
PSEN1-219ENST00000556951 PRKRIP1Q9H875 184 aaPredicted RBP16.76■□□□□ 0.27
PSEN1-219ENST00000556951 SHTN1A0MZ66 631 aa16.75■□□□□ 0.27
PSEN1-219ENST00000556951 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
PSEN1-219ENST00000556951 CHRDL2Q6WN34 429 aa16.75■□□□□ 0.27
PSEN1-219ENST00000556951 GIGYF2Q6Y7W6 1299 aaKnown RBP16.75■□□□□ 0.27
PSEN1-219ENST00000556951 TRPM4Q8TD43 1214 aa16.75■□□□□ 0.27
PSEN1-219ENST00000556951 ZBTB3Q9H5J0 574 aa16.75■□□□□ 0.27
PSEN1-219ENST00000556951 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
PSEN1-219ENST00000556951 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.27
PSEN1-219ENST00000556951 RBM27Q9P2N5 1060 aaKnown RBP16.74■□□□□ 0.27
PSEN1-219ENST00000556951 TBC1D8O95759 1140 aa16.73■□□□□ 0.27
PSEN1-219ENST00000556951 MYL6BP14649 208 aa16.73■□□□□ 0.27
PSEN1-219ENST00000556951 EN2P19622 333 aaPredicted RBP16.73■□□□□ 0.27
PSEN1-219ENST00000556951 NOM1Q5C9Z4 860 aaKnown RBP16.73■□□□□ 0.27
PSEN1-219ENST00000556951 LRP10Q7Z4F1 713 aa16.73■□□□□ 0.27
PSEN1-219ENST00000556951 GBA2Q9HCG7 927 aaPredicted RBP16.73■□□□□ 0.27
PSEN1-219ENST00000556951 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
PSEN1-219ENST00000556951 YDJCA8MPS7 323 aa16.72■□□□□ 0.27
PSEN1-219ENST00000556951 RAD17O75943 681 aa16.72■□□□□ 0.27
PSEN1-219ENST00000556951 KIAA2012Q0VF49 1180 aa16.72■□□□□ 0.27
PSEN1-219ENST00000556951 RALBP1Q15311 655 aa16.72■□□□□ 0.27
PSEN1-219ENST00000556951 USP48Q86UV5 1035 aa16.72■□□□□ 0.27
PSEN1-219ENST00000556951 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
PSEN1-219ENST00000556951 C2orf69Q8N8R5 385 aa16.72■□□□□ 0.27
PSEN1-219ENST00000556951 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
PSEN1-219ENST00000556951 NLRP3Q96P20 1036 aa16.72■□□□□ 0.27
PSEN1-219ENST00000556951 CNOT7Q9UIV1 285 aaKnown RBP16.72■□□□□ 0.27
PSEN1-219ENST00000556951 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
PSEN1-219ENST00000556951 ABCC4O15439 1325 aa16.71■□□□□ 0.27
PSEN1-219ENST00000556951 GPR25O00155 361 aa16.71■□□□□ 0.27
PSEN1-219ENST00000556951 KIF6Q6ZMV9 814 aa16.71■□□□□ 0.27
PSEN1-219ENST00000556951 SUPT20HQ8NEM7 779 aa16.71■□□□□ 0.27
PSEN1-219ENST00000556951 CDHR2Q9BYE9 1310 aa16.7■□□□□ 0.26
PSEN1-219ENST00000556951 POLR2AP24928 1970 aaKnown RBP16.7■□□□□ 0.26
PSEN1-219ENST00000556951 BBOX1O75936 387 aa16.7■□□□□ 0.26
PSEN1-219ENST00000556951 PPP2R1AP30153 589 aa16.7■□□□□ 0.26
PSEN1-219ENST00000556951 PDIA6Q15084 440 aa16.7■□□□□ 0.26
PSEN1-219ENST00000556951 PPP1R42Q7Z4L9 355 aa16.7■□□□□ 0.26
PSEN1-219ENST00000556951 TNIP1Q15025 636 aa16.69■□□□□ 0.26
PSEN1-219ENST00000556951 PARP10Q53GL7 1025 aa16.69■□□□□ 0.26
PSEN1-219ENST00000556951 DPP8Q6V1X1 898 aaPredicted RBP16.69■□□□□ 0.26
PSEN1-219ENST00000556951 MPNDQ8N594 471 aa16.69■□□□□ 0.26
PSEN1-219ENST00000556951 THUMPD2Q9BTF0 503 aaKnown RBP16.69■□□□□ 0.26
PSEN1-219ENST00000556951 BCL2L13Q9BXK5 485 aa16.69■□□□□ 0.26
PSEN1-219ENST00000556951 PRDM6Q9NQX0 595 aa16.69■□□□□ 0.26
PSEN1-219ENST00000556951 EGFRP00533 1210 aa16.68■□□□□ 0.26
PSEN1-219ENST00000556951 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
PSEN1-219ENST00000556951 UTP14AQ9BVJ6 771 aaKnown RBP16.68■□□□□ 0.26
PSEN1-219ENST00000556951 KDM3BQ7LBC6 1761 aa16.68■□□□□ 0.26
PSEN1-219ENST00000556951 SAMD7Q7Z3H4 446 aa16.67■□□□□ 0.26
PSEN1-219ENST00000556951 MICALL2Q8IY33 904 aa16.67■□□□□ 0.26
PSEN1-219ENST00000556951 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
PSEN1-219ENST00000556951 VCANP13611 3396 aa16.66■□□□□ 0.26
PSEN1-219ENST00000556951 H7C1D1 291 aa16.66■□□□□ 0.26
PSEN1-219ENST00000556951 FKTNO75072 461 aa16.66■□□□□ 0.26
PSEN1-219ENST00000556951 HCLS1P14317 486 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-219ENST00000556951 DPF2Q92785 391 aa16.66■□□□□ 0.26
PSEN1-219ENST00000556951 TMX4Q9H1E5 349 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-219ENST00000556951 LAMA3Q16787 3333 aa16.66■□□□□ 0.26
PSEN1-219ENST00000556951 SPTBN5Q9NRC6 3674 aaKnown RBP16.65■□□□□ 0.26
PSEN1-219ENST00000556951 PROSER3Q2NL68 480 aa16.65■□□□□ 0.26
PSEN1-219ENST00000556951 RASAL3Q86YV0 1011 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms