RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 USP54Q70EL1 1684 aa7.1□□□□□ -1.27
ATXN3-244ENST00000556898 GCP02774 474 aa7.1□□□□□ -1.27
ATXN3-244ENST00000556898 KCNH2Q12809 1159 aa7.1□□□□□ -1.27
ATXN3-244ENST00000556898 PTPRNQ16849 979 aa7.1□□□□□ -1.27
ATXN3-244ENST00000556898 HSP90AB2PQ58FF8 381 aa7.1□□□□□ -1.27
ATXN3-244ENST00000556898 PRR7Q8TB68 274 aa7.1□□□□□ -1.27
ATXN3-244ENST00000556898 PNISRQ8TF01 805 aaKnown RBP7.1□□□□□ -1.27
ATXN3-244ENST00000556898 ZFP42Q96MM3 310 aa7.1□□□□□ -1.27
ATXN3-244ENST00000556898 FAM117AQ9C073 453 aa7.1□□□□□ -1.27
ATXN3-244ENST00000556898 NFAT5O94916 1531 aa7.1□□□□□ -1.27
ATXN3-244ENST00000556898 RGPD1P0DJD0 1748 aa7.1□□□□□ -1.27
ATXN3-244ENST00000556898 PHRF1Q9P1Y6 1649 aaKnown RBP7.09□□□□□ -1.27
ATXN3-244ENST00000556898 ERBB4Q15303 1308 aa7.09□□□□□ -1.27
ATXN3-244ENST00000556898 LTV1Q96GA3 475 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-244ENST00000556898 BEGAINQ9BUH8 593 aa7.09□□□□□ -1.27
ATXN3-244ENST00000556898 FHDC1Q9C0D6 1143 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-244ENST00000556898 PDGFDQ9GZP0 370 aaPredicted RBP7.09□□□□□ -1.27
ATXN3-244ENST00000556898 STK32BQ9NY57 414 aa7.09□□□□□ -1.27
ATXN3-244ENST00000556898 COL14A1Q05707 1796 aaKnown RBP7.09□□□□□ -1.27
ATXN3-244ENST00000556898 CRYBG1Q9Y4K1 1723 aa7.09□□□□□ -1.27
ATXN3-244ENST00000556898 PLCH1Q4KWH8 1693 aa7.09□□□□□ -1.27
ATXN3-244ENST00000556898 THSD7AQ9UPZ6 1657 aa7.09□□□□□ -1.27
ATXN3-244ENST00000556898 SMG6Q86US8 1419 aaKnown RBP7.09□□□□□ -1.28
ATXN3-244ENST00000556898 HOXC9P31274 260 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 IL13P35225 146 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 AMPHP49418 695 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 EIF4A2Q14240 407 aaKnown RBP7.08□□□□□ -1.28
ATXN3-244ENST00000556898 SLC15A2Q16348 729 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 DDB1Q16531 1140 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 ARHGEF25Q86VW2 580 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 CCDC146Q8IYE0 955 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 ZNF511Q8NB15 262 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 KCNH5Q8NCM2 988 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 SLC16A10Q8TF71 515 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 MTFR1LQ9H019 292 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 ADAMTS8Q9UP79 889 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 CPDO75976 1380 aa7.08□□□□□ -1.28
ATXN3-244ENST00000556898 H3BM21 787 aa7.07□□□□□ -1.28
ATXN3-244ENST00000556898 U2SURPO15042 1029 aaKnown RBP7.07□□□□□ -1.28
ATXN3-244ENST00000556898 DIAPH1O60610 1272 aaKnown RBP7.07□□□□□ -1.28
ATXN3-244ENST00000556898 GJA5P36382 358 aa7.07□□□□□ -1.28
ATXN3-244ENST00000556898 TXNRD1Q16881 649 aa7.07□□□□□ -1.28
ATXN3-244ENST00000556898 CDCA7Q9BWT1 371 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-244ENST00000556898 KLF16Q9BXK1 252 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-244ENST00000556898 PCDHB15Q9Y5E8 787 aa7.07□□□□□ -1.28
ATXN3-244ENST00000556898 NRAPQ86VF7 1730 aa7.07□□□□□ -1.28
ATXN3-244ENST00000556898 ABCA3Q99758 1704 aa7.07□□□□□ -1.28
ATXN3-244ENST00000556898 MAP2P11137 1827 aaKnown RBP7.06□□□□□ -1.28
ATXN3-244ENST00000556898 SOBPA7XYQ1 873 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 GIGYF1O75420 1035 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-244ENST00000556898 HMOX1P09601 288 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 NNTQ13423 1086 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 MTMR2Q13614 643 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 DIXDC1Q155Q3 683 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 GPR162Q16538 588 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 PTF1AQ7RTS3 328 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 AEBP1Q8IUX7 1158 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 USHBP1Q8N6Y0 703 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 IP6K1Q92551 441 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 CFAP53Q96M91 514 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 ARXQ96QS3 562 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 FLT4P35916 1363 aa7.06□□□□□ -1.28
ATXN3-244ENST00000556898 LTN1O94822 1766 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 OVOS2A0A0G2JMS6 1433 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 CFAP99D6REC4 459 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 U2AF1L5P0DN76 240 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-244ENST00000556898 TIMP2P16035 220 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 VARSP26640 1264 aaKnown RBP7.05□□□□□ -1.28
ATXN3-244ENST00000556898 U2AF1Q01081 240 aaKnown RBP eCLIP7.05□□□□□ -1.28
ATXN3-244ENST00000556898 WDR43Q15061 677 aaKnown RBP eCLIP7.05□□□□□ -1.28
ATXN3-244ENST00000556898 DESI1Q6ICB0 168 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 TOM1L2Q6ZVM7 507 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 NPAS3Q8IXF0 933 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 MPNDQ8N594 471 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 MARCH10Q8NA82 808 aaPredicted RBP7.05□□□□□ -1.28
ATXN3-244ENST00000556898 ANKRD24Q8TF21 1146 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 INSRP06213 1382 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 COL18A1P39060 1754 aa7.05□□□□□ -1.28
ATXN3-244ENST00000556898 TNS1Q9HBL0 1735 aaKnown RBP7.04□□□□□ -1.28
ATXN3-244ENST00000556898 CAMTA1Q9Y6Y1 1673 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 SPDYE5A6NIY4 337 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 EXOC5O00471 708 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 SH3D19Q5HYK7 790 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 MRPL14Q6P1L8 145 aaKnown RBP7.04□□□□□ -1.28
ATXN3-244ENST00000556898 LYPD8Q6UX82 237 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 ZSCAN1Q8NBB4 408 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 FOXJ1Q92949 421 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 IRF7Q92985 503 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 PURBQ96QR8 312 aaKnown RBP7.04□□□□□ -1.28
ATXN3-244ENST00000556898 TBC1D2Q9BYX2 928 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 GOPCQ9HD26 462 aa7.04□□□□□ -1.28
ATXN3-244ENST00000556898 BCL9O00512 1426 aa7.03□□□□□ -1.28
ATXN3-244ENST00000556898 CRB1P82279 1406 aa7.03□□□□□ -1.28
ATXN3-244ENST00000556898 WDR4P57081 412 aaKnown RBP7.03□□□□□ -1.28
ATXN3-244ENST00000556898 HNRNPUQ00839 825 aaKnown RBP eCLIP7.03□□□□□ -1.28
ATXN3-244ENST00000556898 MYSM1Q5VVJ2 828 aa7.03□□□□□ -1.28
ATXN3-244ENST00000556898 SULT6B1Q6IMI4 303 aa7.03□□□□□ -1.28
ATXN3-244ENST00000556898 RSBN1LQ6PCB5 846 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms