RNA–Protein interactions for RNA: ENST00000556846.1

PCNX1-213, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 506 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-213ENST00000556846 AFDNP55196 1824 aaKnown RBP9.35□□□□□ -0.91
PCNX1-213ENST00000556846 CHL1O00533 1208 aa9.35□□□□□ -0.91
PCNX1-213ENST00000556846 ANXA1P04083 346 aa9.35□□□□□ -0.91
PCNX1-213ENST00000556846 PARP10Q53GL7 1025 aa9.35□□□□□ -0.91
PCNX1-213ENST00000556846 COPS6Q7L5N1 327 aa9.35□□□□□ -0.91
PCNX1-213ENST00000556846 MICALL2Q8IY33 904 aa9.35□□□□□ -0.91
PCNX1-213ENST00000556846 ZNF34Q8IZ26 560 aa9.35□□□□□ -0.91
PCNX1-213ENST00000556846 EFCAB3Q8N7B9 438 aa9.35□□□□□ -0.91
PCNX1-213ENST00000556846 SPOCK2Q92563 424 aa9.35□□□□□ -0.91
PCNX1-213ENST00000556846 RBM17Q96I25 401 aaKnown RBP9.35□□□□□ -0.91
PCNX1-213ENST00000556846 ARFGEF1Q9Y6D6 1849 aa9.35□□□□□ -0.91
PCNX1-213ENST00000556846 SCN7AQ01118 1682 aa9.35□□□□□ -0.91
PCNX1-213ENST00000556846 LTBP3Q9NS15 1303 aa9.34□□□□□ -0.91
PCNX1-213ENST00000556846 TCERG1O14776 1098 aaKnown RBP9.34□□□□□ -0.91
PCNX1-213ENST00000556846 DDNO94850 711 aaPredicted RBP9.34□□□□□ -0.91
PCNX1-213ENST00000556846 ZEB1P37275 1124 aaPredicted RBP9.34□□□□□ -0.91
PCNX1-213ENST00000556846 FKBP4Q02790 459 aaKnown RBP eCLIP9.34□□□□□ -0.91
PCNX1-213ENST00000556846 PDIA6Q15084 440 aa9.34□□□□□ -0.91
PCNX1-213ENST00000556846 PROSER3Q2NL68 480 aa9.34□□□□□ -0.91
PCNX1-213ENST00000556846 HSP90AB3PQ58FF7 597 aa9.34□□□□□ -0.91
PCNX1-213ENST00000556846 OLFM4Q6UX06 510 aa9.34□□□□□ -0.91
PCNX1-213ENST00000556846 SYNE4Q8N205 404 aa9.34□□□□□ -0.91
PCNX1-213ENST00000556846 XAGE3Q8WTP9 111 aa9.34□□□□□ -0.91
PCNX1-213ENST00000556846 C7orf43Q8WVR3 580 aa9.34□□□□□ -0.91
PCNX1-213ENST00000556846 NLRP3Q96P20 1036 aa9.34□□□□□ -0.91
PCNX1-213ENST00000556846 UTP14AQ9BVJ6 771 aaKnown RBP9.34□□□□□ -0.91
PCNX1-213ENST00000556846 ZNF277Q9NRM2 450 aaPredicted RBP9.34□□□□□ -0.91
PCNX1-213ENST00000556846 PLA2G2EQ9NZK7 142 aa9.34□□□□□ -0.91
PCNX1-213ENST00000556846 BRCA1P38398 1863 aaKnown RBP9.34□□□□□ -0.91
PCNX1-213ENST00000556846 APAF1O14727 1248 aa9.33□□□□□ -0.92
PCNX1-213ENST00000556846 CALD1Q05682 793 aaKnown RBP9.33□□□□□ -0.92
PCNX1-213ENST00000556846 KRT24Q2M2I5 525 aa9.33□□□□□ -0.92
PCNX1-213ENST00000556846 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
PCNX1-213ENST00000556846 JDP2Q8WYK2 163 aa9.33□□□□□ -0.92
PCNX1-213ENST00000556846 CIZ1Q9ULV3 898 aaPredicted RBP9.33□□□□□ -0.92
PCNX1-213ENST00000556846 UBN2Q6ZU65 1347 aa9.32□□□□□ -0.92
PCNX1-213ENST00000556846 NTSR2O95665 410 aa9.32□□□□□ -0.92
PCNX1-213ENST00000556846 HTRA3P83110 453 aa9.32□□□□□ -0.92
PCNX1-213ENST00000556846 CRY2Q49AN0 593 aa9.32□□□□□ -0.92
PCNX1-213ENST00000556846 CC2D2BQ6DHV5 1058 aa9.32□□□□□ -0.92
PCNX1-213ENST00000556846 IFNLR1Q8IU57 520 aaPredicted RBP9.32□□□□□ -0.92
PCNX1-213ENST00000556846 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
PCNX1-213ENST00000556846 CRAMP1Q96RY5 1269 aa9.32□□□□□ -0.92
PCNX1-213ENST00000556846 DDX21Q9NR30 783 aaKnown RBP eCLIP9.32□□□□□ -0.92
PCNX1-213ENST00000556846 CHPF2Q9P2E5 772 aa9.32□□□□□ -0.92
PCNX1-213ENST00000556846 DBF4Q9UBU7 674 aaPredicted RBP9.32□□□□□ -0.92
PCNX1-213ENST00000556846 TRMT112Q9UI30 125 aaKnown RBP9.32□□□□□ -0.92
PCNX1-213ENST00000556846 IQCA1LA6NCM1 817 aa9.31□□□□□ -0.92
PCNX1-213ENST00000556846 ELL2O00472 640 aaPredicted RBP9.31□□□□□ -0.92
PCNX1-213ENST00000556846 PPEF1O14829 653 aaPredicted RBP9.31□□□□□ -0.92
PCNX1-213ENST00000556846 HOXA10P31260 410 aaPredicted RBP9.31□□□□□ -0.92
PCNX1-213ENST00000556846 IARSP41252 1262 aaKnown RBP9.31□□□□□ -0.92
PCNX1-213ENST00000556846 GNAI1P63096 354 aa9.31□□□□□ -0.92
PCNX1-213ENST00000556846 TCIRG1Q13488 830 aa9.31□□□□□ -0.92
PCNX1-213ENST00000556846 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
PCNX1-213ENST00000556846 DUSP27Q5VZP5 1158 aa9.31□□□□□ -0.92
PCNX1-213ENST00000556846 ANKRD13DQ6ZTN6 518 aa9.31□□□□□ -0.92
PCNX1-213ENST00000556846 LRP10Q7Z4F1 713 aa9.31□□□□□ -0.92
PCNX1-213ENST00000556846 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
PCNX1-213ENST00000556846 ABCC12Q96J65 1359 aa9.31□□□□□ -0.92
PCNX1-213ENST00000556846 BCORQ6W2J9 1755 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 IBTKQ9P2D0 1353 aaPredicted RBP9.3□□□□□ -0.92
PCNX1-213ENST00000556846 POTECB2RU33 542 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 HOXB7P09629 217 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 HCLS1P14317 486 aaPredicted RBP9.3□□□□□ -0.92
PCNX1-213ENST00000556846 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
PCNX1-213ENST00000556846 EAPPQ56P03 285 aaPredicted RBP9.3□□□□□ -0.92
PCNX1-213ENST00000556846 SLC10A5Q5PT55 438 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 NLRP10Q86W26 655 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 LARGE2Q8N3Y3 721 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 DNAJC5GQ8N7S2 189 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 PLBD2Q8NHP8 589 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 PSMD1Q99460 953 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 MBIPQ9NS73 344 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 HYPKQ9NX55 129 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 ANKRD31Q8N7Z5 1873 aa9.3□□□□□ -0.92
PCNX1-213ENST00000556846 KDM3BQ7LBC6 1761 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 DLEC1Q9Y238 1755 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 DDX46Q7L014 1031 aaKnown RBP9.29□□□□□ -0.92
PCNX1-213ENST00000556846 RIC3Q7Z5B4 369 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 KLRG1Q96E93 195 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 CHMP4AQ9BY43 222 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 IFT57Q9NWB7 429 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 HACL1Q9UJ83 578 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 GJA3Q9Y6H8 435 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 DLG5Q8TDM6 1919 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 RNF123Q5XPI4 1314 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 SH3TC1Q8TE82 1336 aa9.29□□□□□ -0.92
PCNX1-213ENST00000556846 SLX4Q8IY92 1834 aa9.28□□□□□ -0.92
PCNX1-213ENST00000556846 LAMB4A4D0S4 1761 aa9.28□□□□□ -0.92
PCNX1-213ENST00000556846 ATP5J2-PTCD1G3V325 749 aa9.28□□□□□ -0.92
PCNX1-213ENST00000556846 ANP32CO43423 234 aa9.28□□□□□ -0.92
PCNX1-213ENST00000556846 BBOX1O75936 387 aa9.28□□□□□ -0.92
PCNX1-213ENST00000556846 RTL5Q5HYW3 569 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-213ENST00000556846 ATP6V0A2Q9Y487 856 aa9.28□□□□□ -0.92
PCNX1-213ENST00000556846 GOLGB1Q14789 3259 aaKnown RBP9.28□□□□□ -0.92
PCNX1-213ENST00000556846 ZNF541Q9H0D2 1346 aa9.28□□□□□ -0.92
PCNX1-213ENST00000556846 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
PCNX1-213ENST00000556846 ZNF316A6NFI3 1004 aaPredicted RBP9.27□□□□□ -0.93
PCNX1-213ENST00000556846 FZD9O00144 591 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms