RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 FAM9AQ8IZU1 332 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-243ENST00000556671 FAM200AQ8TCP9 573 aa7.73□□□□□ -1.17
ATXN3-243ENST00000556671 QTRT2Q9H974 415 aaKnown RBP7.73□□□□□ -1.17
ATXN3-243ENST00000556671 MAGI1Q96QZ7 1491 aaPredicted RBP7.73□□□□□ -1.17
ATXN3-243ENST00000556671 SPDYE3A6NKU9 549 aa7.72□□□□□ -1.17
ATXN3-243ENST00000556671 CDCA8Q53HL2 280 aa7.72□□□□□ -1.17
ATXN3-243ENST00000556671 C20orf204Q6ZNR8 217 aa7.72□□□□□ -1.17
ATXN3-243ENST00000556671 GSX2Q9BZM3 304 aa7.72□□□□□ -1.17
ATXN3-243ENST00000556671 KIF27Q86VH2 1401 aa7.71□□□□□ -1.17
ATXN3-243ENST00000556671 SYNJ2O15056 1496 aa7.71□□□□□ -1.18
ATXN3-243ENST00000556671 RFX1P22670 979 aa7.71□□□□□ -1.18
ATXN3-243ENST00000556671 GRNP28799 593 aaKnown RBP7.71□□□□□ -1.18
ATXN3-243ENST00000556671 CYB5RLQ6IPT4 315 aa7.71□□□□□ -1.18
ATXN3-243ENST00000556671 C8orf86Q6ZUL3 223 aa7.71□□□□□ -1.18
ATXN3-243ENST00000556671 MYO19Q96H55 970 aa7.71□□□□□ -1.18
ATXN3-243ENST00000556671 UBE2OQ9C0C9 1292 aaKnown RBP7.71□□□□□ -1.18
ATXN3-243ENST00000556671 KLK14Q9P0G3 267 aa7.71□□□□□ -1.18
ATXN3-243ENST00000556671 NOVA2Q9UNW9 492 aaKnown RBP7.71□□□□□ -1.18
ATXN3-243ENST00000556671 RIMBP3CA6NJZ7 1639 aa7.7□□□□□ -1.18
ATXN3-243ENST00000556671 RIMBP3BA6NNM3 1639 aa7.7□□□□□ -1.18
ATXN3-243ENST00000556671 RIMBP3Q9UFD9 1639 aa7.7□□□□□ -1.18
ATXN3-243ENST00000556671 NID1P14543 1247 aa7.7□□□□□ -1.18
ATXN3-243ENST00000556671 INPP5BP32019 993 aa7.7□□□□□ -1.18
ATXN3-243ENST00000556671 IDH3AP50213 366 aa7.7□□□□□ -1.18
ATXN3-243ENST00000556671 DGKZQ13574 1117 aa7.7□□□□□ -1.18
ATXN3-243ENST00000556671 CCINQ13939 588 aa7.7□□□□□ -1.18
ATXN3-243ENST00000556671 TTBK1Q5TCY1 1321 aaPredicted RBP7.7□□□□□ -1.18
ATXN3-243ENST00000556671 ERICH3Q5RHP9 1530 aa7.69□□□□□ -1.18
ATXN3-243ENST00000556671 RUSC2Q8N2Y8 1516 aa7.69□□□□□ -1.18
ATXN3-243ENST00000556671 K7ELQ4 463 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-243ENST00000556671 EPB42P16452 691 aa7.69□□□□□ -1.18
ATXN3-243ENST00000556671 PRRT3Q5FWE3 981 aa7.69□□□□□ -1.18
ATXN3-243ENST00000556671 VTI1AQ96AJ9 217 aa7.69□□□□□ -1.18
ATXN3-243ENST00000556671 SLC6A14Q9UN76 642 aa7.69□□□□□ -1.18
ATXN3-243ENST00000556671 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-243ENST00000556671 ADAMTS12P58397 1594 aa7.68□□□□□ -1.18
ATXN3-243ENST00000556671 NFKB1P19838 968 aa7.68□□□□□ -1.18
ATXN3-243ENST00000556671 ARSDP51689 593 aa7.68□□□□□ -1.18
ATXN3-243ENST00000556671 TBC1D8BQ0IIM8 1120 aa7.68□□□□□ -1.18
ATXN3-243ENST00000556671 ELOAQ14241 798 aaKnown RBP7.68□□□□□ -1.18
ATXN3-243ENST00000556671 SWI5Q1ZZU3 235 aa7.68□□□□□ -1.18
ATXN3-243ENST00000556671 C11orf91Q3C1V1 193 aa7.68□□□□□ -1.18
ATXN3-243ENST00000556671 PNMA5Q96PV4 448 aa7.68□□□□□ -1.18
ATXN3-243ENST00000556671 C11orf16Q9NQ32 467 aa7.68□□□□□ -1.18
ATXN3-243ENST00000556671 DNAJB12Q9NXW2 375 aaKnown RBP7.68□□□□□ -1.18
ATXN3-243ENST00000556671 ZMIZ1Q9ULJ6 1067 aa7.68□□□□□ -1.18
ATXN3-243ENST00000556671 ACIN1Q9UKV3 1341 aaKnown RBP7.68□□□□□ -1.18
ATXN3-243ENST00000556671 FHAD1B1AJZ9 1412 aa7.68□□□□□ -1.18
ATXN3-243ENST00000556671 CUL7Q14999 1698 aa7.67□□□□□ -1.18
ATXN3-243ENST00000556671 LILRB5O75023 590 aa7.67□□□□□ -1.18
ATXN3-243ENST00000556671 MICAL2O94851 1124 aa7.67□□□□□ -1.18
ATXN3-243ENST00000556671 FURINP09958 794 aa7.67□□□□□ -1.18
ATXN3-243ENST00000556671 SRPK2P78362 688 aaKnown RBP7.67□□□□□ -1.18
ATXN3-243ENST00000556671 IGFLR1Q9H665 355 aa7.67□□□□□ -1.18
ATXN3-243ENST00000556671 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.67□□□□□ -1.18
ATXN3-243ENST00000556671 LRFN2Q9ULH4 789 aa7.67□□□□□ -1.18
ATXN3-243ENST00000556671 GRIN2AQ12879 1464 aa7.67□□□□□ -1.18
ATXN3-243ENST00000556671 FAM229AH3BQW9 127 aa7.66□□□□□ -1.18
ATXN3-243ENST00000556671 FKBP5Q13451 457 aaPredicted RBP7.66□□□□□ -1.18
ATXN3-243ENST00000556671 NAGPAQ9UK23 515 aa7.66□□□□□ -1.18
ATXN3-243ENST00000556671 ARHGEF11O15085 1522 aa7.65□□□□□ -1.18
ATXN3-243ENST00000556671 MAP3K6O95382 1288 aa7.65□□□□□ -1.18
ATXN3-243ENST00000556671 GATA4P43694 442 aa7.65□□□□□ -1.18
ATXN3-243ENST00000556671 RANGAP1P46060 587 aaPredicted RBP7.65□□□□□ -1.18
ATXN3-243ENST00000556671 FAM69CQ0P6D2 419 aa7.65□□□□□ -1.18
ATXN3-243ENST00000556671 TRIM28Q13263 835 aaKnown RBP7.65□□□□□ -1.18
ATXN3-243ENST00000556671 CEP170Q5SW79 1584 aa7.65□□□□□ -1.18
ATXN3-243ENST00000556671 CARMIL1Q5VZK9 1371 aa7.65□□□□□ -1.18
ATXN3-243ENST00000556671 ZFATQ9P243 1243 aa7.65□□□□□ -1.18
ATXN3-243ENST00000556671 APBA3O96018 575 aa7.64□□□□□ -1.19
ATXN3-243ENST00000556671 OCLNQ16625 522 aa7.64□□□□□ -1.19
ATXN3-243ENST00000556671 PSAPL1Q6NUJ1 521 aa7.64□□□□□ -1.19
ATXN3-243ENST00000556671 STK32AQ8WU08 396 aa7.64□□□□□ -1.19
ATXN3-243ENST00000556671 NUDT8Q8WV74 236 aa7.64□□□□□ -1.19
ATXN3-243ENST00000556671 IFT43Q96FT9 208 aa7.64□□□□□ -1.19
ATXN3-243ENST00000556671 PRIMPOLQ96LW4 560 aa7.64□□□□□ -1.19
ATXN3-243ENST00000556671 JPH1Q9HDC5 661 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-243ENST00000556671 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-243ENST00000556671 OPLAHO14841 1288 aa7.63□□□□□ -1.19
ATXN3-243ENST00000556671 PRMT3O60678 531 aa7.63□□□□□ -1.19
ATXN3-243ENST00000556671 AFF1P51825 1210 aaKnown RBP7.63□□□□□ -1.19
ATXN3-243ENST00000556671 PCSK7Q16549 785 aa7.63□□□□□ -1.19
ATXN3-243ENST00000556671 COX20Q5RI15 118 aa7.63□□□□□ -1.19
ATXN3-243ENST00000556671 TRAPPC3LQ5T215 181 aa7.63□□□□□ -1.19
ATXN3-243ENST00000556671 NACC1Q96RE7 527 aa7.63□□□□□ -1.19
ATXN3-243ENST00000556671 ZMYND15Q9H091 742 aa7.63□□□□□ -1.19
ATXN3-243ENST00000556671 CLASP1Q7Z460 1538 aa7.62□□□□□ -1.19
ATXN3-243ENST00000556671 ZBTB42B2RXF5 422 aa7.62□□□□□ -1.19
ATXN3-243ENST00000556671 ATG7O95352 703 aa7.62□□□□□ -1.19
ATXN3-243ENST00000556671 EGFRP00533 1210 aa7.62□□□□□ -1.19
ATXN3-243ENST00000556671 TARSP26639 723 aaKnown RBP7.62□□□□□ -1.19
ATXN3-243ENST00000556671 DOC2BQ14184 412 aa7.62□□□□□ -1.19
ATXN3-243ENST00000556671 GRIK4Q16099 956 aa7.62□□□□□ -1.19
ATXN3-243ENST00000556671 ILDR2Q71H61 639 aa7.62□□□□□ -1.19
ATXN3-243ENST00000556671 DHX32Q7L7V1 743 aaKnown RBP7.62□□□□□ -1.19
ATXN3-243ENST00000556671 KRT25Q7Z3Z0 450 aa7.62□□□□□ -1.19
ATXN3-243ENST00000556671 TREML1Q86YW5 311 aa7.62□□□□□ -1.19
ATXN3-243ENST00000556671 TRPM4Q8TD43 1214 aa7.62□□□□□ -1.19
ATXN3-243ENST00000556671 RTCBQ9Y3I0 505 aaKnown RBP7.62□□□□□ -1.19
ATXN3-243ENST00000556671 CTTNBP2Q8WZ74 1663 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms