RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 MSX1P28360 303 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 DNAJA1P31689 397 aaKnown RBP4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 RACK1P63244 317 aaKnown RBP4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 ARID5AQ03989 594 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 TYRO3Q06418 890 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 MEI1Q5TIA1 1274 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 GALNT12Q8IXK2 581 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 PMEPA1Q969W9 287 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 SPATA32Q96LK8 384 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 CEP63Q96MT8 703 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 CHRDQ9H2X0 955 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 SRA1Q9HD15 236 aaKnown RBP4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 CUEDC1Q9NWM3 386 aaPredicted RBP4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 ABI2Q9NYB9 513 aaPredicted RBP4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 PCDHGB7Q9Y5F8 929 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 GJA3Q9Y6H8 435 aa4.56□□□□□ -1.68
MTHFD1-212ENST00000555858 SMARCA5O60264 1052 aaPredicted RBP4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 GADD45BO75293 160 aaPredicted RBP4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 POLR3DP05423 398 aaPredicted RBP4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 C6orf118Q5T5N4 469 aa4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 NXPE4Q6UWF7 544 aa4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 DPH6Q7L8W6 267 aa4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 NLRP13Q86W25 1043 aa4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 VPS37DQ86XT2 251 aa4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 DHX38Q92620 1227 aaKnown RBP4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 DNAJC2Q99543 621 aaKnown RBP4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 BCO2Q9BYV7 579 aa4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 CRISPLD1Q9H336 500 aa4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 SUV39H2Q9H5I1 410 aa4.55□□□□□ -1.68
MTHFD1-212ENST00000555858 TTLL8A6PVC2 850 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 POTECB2RU33 542 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 EREGO14944 169 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 RHOQP17081 205 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 CES1P23141 567 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 GRNP28799 593 aaKnown RBP4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 GSTT1P30711 240 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 GTF2F1P35269 517 aaKnown RBP eCLIP4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 SAMD5Q5TGI4 173 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 TTC39BQ5VTQ0 682 aaPredicted RBP4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 MRPL14Q6P1L8 145 aaKnown RBP4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 TRIM67Q6ZTA4 783 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 ERMP1Q7Z2K6 904 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 C1orf127Q8N9H9 656 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 BRD7Q9NPI1 651 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 PPP4R2Q9NY27 417 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 CNTN3Q9P232 1028 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 TRAK1Q9UPV9 953 aa4.54□□□□□ -1.68
MTHFD1-212ENST00000555858 GJA8P48165 433 aa4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 VEGFBP49765 207 aa4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 SCARF1Q14162 830 aa4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 GRM2Q14416 872 aa4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 KIAA0319Q5VV43 1072 aa4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 NOP9Q86U38 636 aaKnown RBP4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 NLRP8Q86W28 1048 aa4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 PGBD3Q8N328 593 aa4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 NOC4LQ9BVI4 516 aaKnown RBP4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 LNPKQ9C0E8 428 aa4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 PLA2G2EQ9NZK7 142 aa4.53□□□□□ -1.68
MTHFD1-212ENST00000555858 SOS2Q07890 1332 aaPredicted RBP4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 F11P03951 625 aa4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 EDN3P14138 238 aa4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 KCNQ4P56696 695 aa4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 RBL2Q08999 1139 aa4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 SOGA3Q5TF21 947 aa4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 GPRASP2Q96D09 838 aa4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 HIRIP3Q9BW71 556 aaPredicted RBP4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 EHD4Q9H223 541 aa4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 GPAMQ9HCL2 828 aa4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 TTF2Q9UNY4 1162 aaKnown RBP4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 DYRK1BQ9Y463 629 aa4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 CADPSQ9ULU8 1353 aa4.52□□□□□ -1.69
MTHFD1-212ENST00000555858 A0A1W2PP55 124 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 PHF20L1A8MW92 1017 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 FGRP09769 529 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 XRCC5P13010 732 aaKnown RBP4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 ATF4P18848 351 aaPredicted RBP4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 PAK2Q13177 524 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 MMRN1Q13201 1228 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 PWP1Q13610 501 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 LBRQ14739 615 aaKnown RBP4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 EFHC2Q5JST6 749 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 PRPF40BQ6NWY9 871 aaKnown RBP4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 GIMAP6Q6P9H5 292 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 MCF2L2Q86YR7 1114 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 GLIS3Q8NEA6 775 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 ANKRD24Q8TF21 1146 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 RSRP1Q9BUV0 290 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 ZCCHC2Q9C0B9 1178 aaKnown RBP4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 RUBCNLQ9H714 662 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 COPRSQ9NQ92 184 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 KBTBD4Q9NVX7 518 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 PPM1HQ9ULR3 514 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 KCNH4Q9UQ05 1017 aa4.51□□□□□ -1.69
MTHFD1-212ENST00000555858 FIGNL2A6NMB9 653 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 SASH3O75995 380 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 STK10O94804 968 aaKnown RBP4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 CYP2E1P05181 493 aaPredicted RBP4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 FAM157BP0CG42 384 aa4.5□□□□□ -1.69
MTHFD1-212ENST00000555858 CCINQ13939 588 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms