RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 BRCA1P38398 1863 aaKnown RBP12.4□□□□□ -0.42
PSEN1-213ENST00000555386 SRGNP10124 158 aa12.4□□□□□ -0.43
PSEN1-213ENST00000555386 BRPF1P55201 1214 aaPredicted RBP12.4□□□□□ -0.43
PSEN1-213ENST00000555386 DALRD3Q5D0E6 543 aaKnown RBP12.4□□□□□ -0.43
PSEN1-213ENST00000555386 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
PSEN1-213ENST00000555386 SLX4Q8IY92 1834 aa12.39□□□□□ -0.43
PSEN1-213ENST00000555386 GRM8O00222 908 aa12.39□□□□□ -0.43
PSEN1-213ENST00000555386 YBX3P16989 372 aaKnown RBP eCLIP12.39□□□□□ -0.43
PSEN1-213ENST00000555386 SLC10A5Q5PT55 438 aa12.39□□□□□ -0.43
PSEN1-213ENST00000555386 TTLL6Q8N841 843 aa12.39□□□□□ -0.43
PSEN1-213ENST00000555386 MASTLQ96GX5 879 aa12.39□□□□□ -0.43
PSEN1-213ENST00000555386 CHMP3Q9Y3E7 222 aa12.39□□□□□ -0.43
PSEN1-213ENST00000555386 H7C1W4 665 aa12.38□□□□□ -0.43
PSEN1-213ENST00000555386 PDE8AO60658 829 aa12.38□□□□□ -0.43
PSEN1-213ENST00000555386 ALDH1L1O75891 902 aa12.38□□□□□ -0.43
PSEN1-213ENST00000555386 NBPF7P0C2Y1 421 aaPredicted RBP12.38□□□□□ -0.43
PSEN1-213ENST00000555386 NPR1P16066 1061 aa12.38□□□□□ -0.43
PSEN1-213ENST00000555386 CCT4P50991 539 aaKnown RBP12.38□□□□□ -0.43
PSEN1-213ENST00000555386 TMEM57Q8N5G2 664 aa12.38□□□□□ -0.43
PSEN1-213ENST00000555386 PANK1Q8TE04 598 aa12.38□□□□□ -0.43
PSEN1-213ENST00000555386 ARHGAP45Q92619 1136 aa12.38□□□□□ -0.43
PSEN1-213ENST00000555386 RBM17Q96I25 401 aaKnown RBP12.38□□□□□ -0.43
PSEN1-213ENST00000555386 C21orf2O43822 256 aa12.37□□□□□ -0.43
PSEN1-213ENST00000555386 MS4A1P11836 297 aa12.37□□□□□ -0.43
PSEN1-213ENST00000555386 STYK1Q6J9G0 422 aa12.37□□□□□ -0.43
PSEN1-213ENST00000555386 DDX46Q7L014 1031 aaKnown RBP12.37□□□□□ -0.43
PSEN1-213ENST00000555386 ITPRIPQ8IWB1 547 aa12.37□□□□□ -0.43
PSEN1-213ENST00000555386 DZIP1LQ8IYY4 767 aaKnown RBP12.37□□□□□ -0.43
PSEN1-213ENST00000555386 SPEF2Q9C093 1822 aa12.37□□□□□ -0.43
PSEN1-213ENST00000555386 RLBP1P12271 317 aa12.36□□□□□ -0.43
PSEN1-213ENST00000555386 HSP90B1P14625 803 aaKnown RBP12.36□□□□□ -0.43
PSEN1-213ENST00000555386 CTSWP56202 376 aa12.36□□□□□ -0.43
PSEN1-213ENST00000555386 PRPF40BQ6NWY9 871 aaKnown RBP12.36□□□□□ -0.43
PSEN1-213ENST00000555386 OLFM4Q6UX06 510 aa12.36□□□□□ -0.43
PSEN1-213ENST00000555386 ARHGAP27Q6ZUM4 889 aa12.36□□□□□ -0.43
PSEN1-213ENST00000555386 SLC51AQ86UW1 340 aa12.36□□□□□ -0.43
PSEN1-213ENST00000555386 CNKSR1Q969H4 720 aa12.36□□□□□ -0.43
PSEN1-213ENST00000555386 SEC31BQ9NQW1 1179 aa12.36□□□□□ -0.43
PSEN1-213ENST00000555386 PDZRN3Q9UPQ7 1066 aa12.36□□□□□ -0.43
PSEN1-213ENST00000555386 ABCC4O15439 1325 aa12.36□□□□□ -0.43
PSEN1-213ENST00000555386 KLRG2A4D1S0 409 aaPredicted RBP12.35□□□□□ -0.43
PSEN1-213ENST00000555386 CASP7P55210 303 aa12.35□□□□□ -0.43
PSEN1-213ENST00000555386 CRY2Q49AN0 593 aa12.35□□□□□ -0.43
PSEN1-213ENST00000555386 CCDC152Q4G0S7 254 aa12.35□□□□□ -0.43
PSEN1-213ENST00000555386 SUCLG2Q96I99 432 aa12.35□□□□□ -0.43
PSEN1-213ENST00000555386 CRBNQ96SW2 442 aa12.35□□□□□ -0.43
PSEN1-213ENST00000555386 USP44Q9H0E7 712 aa12.35□□□□□ -0.43
PSEN1-213ENST00000555386 CDHR2Q9BYE9 1310 aa12.35□□□□□ -0.43
PSEN1-213ENST00000555386 UBTFL1P0CB47 393 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-213ENST00000555386 ALDH1B1P30837 517 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 EPHA10Q5JZY3 1008 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 MEIS3Q99687 375 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 GREM2Q9H772 168 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 ARFGEF1Q9Y6D6 1849 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 RIC1Q4ADV7 1423 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 PPEF1O14829 653 aaPredicted RBP12.34□□□□□ -0.43
PSEN1-213ENST00000555386 SF3B3Q15393 1217 aaKnown RBP12.34□□□□□ -0.43
PSEN1-213ENST00000555386 FAM161AQ3B820 660 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 C20orf194Q5TEA3 1177 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 INTS3Q68E01 1043 aaKnown RBP12.34□□□□□ -0.43
PSEN1-213ENST00000555386 TTLL11Q8NHH1 800 aa12.34□□□□□ -0.43
PSEN1-213ENST00000555386 CELF1Q92879 486 aaKnown RBP12.34□□□□□ -0.43
PSEN1-213ENST00000555386 COL4A1P02462 1669 aa12.33□□□□□ -0.44
PSEN1-213ENST00000555386 HOXA10P31260 410 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-213ENST00000555386 FOXO4P98177 505 aa12.33□□□□□ -0.44
PSEN1-213ENST00000555386 GRAPQ13588 217 aa12.33□□□□□ -0.44
PSEN1-213ENST00000555386 GRAPLQ8TC17 118 aaPredicted RBP12.33□□□□□ -0.44
PSEN1-213ENST00000555386 CRAMP1Q96RY5 1269 aa12.33□□□□□ -0.44
PSEN1-213ENST00000555386 BICC1Q9H694 974 aaKnown RBP12.33□□□□□ -0.44
PSEN1-213ENST00000555386 COG6Q9Y2V7 657 aa12.33□□□□□ -0.44
PSEN1-213ENST00000555386 GRIN3BO60391 1043 aa12.32□□□□□ -0.44
PSEN1-213ENST00000555386 RASSF7Q02833 373 aa12.32□□□□□ -0.44
PSEN1-213ENST00000555386 TAF7LQ5H9L4 462 aa12.32□□□□□ -0.44
PSEN1-213ENST00000555386 KAZALD1Q96I82 304 aa12.32□□□□□ -0.44
PSEN1-213ENST00000555386 TMX4Q9H1E5 349 aaPredicted RBP12.32□□□□□ -0.44
PSEN1-213ENST00000555386 C1orf115Q9H7X2 142 aa12.32□□□□□ -0.44
PSEN1-213ENST00000555386 LRRFIP2Q9Y608 721 aaKnown RBP12.32□□□□□ -0.44
PSEN1-213ENST00000555386 SPDYE4A6NLX3 237 aa12.31□□□□□ -0.44
PSEN1-213ENST00000555386 ITGA6P23229 1130 aa12.31□□□□□ -0.44
PSEN1-213ENST00000555386 CENPQQ7L2Z9 268 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-213ENST00000555386 ANKRD18AQ8IVF6 992 aa12.31□□□□□ -0.44
PSEN1-213ENST00000555386 ZNF594Q96JF6 807 aaPredicted RBP12.31□□□□□ -0.44
PSEN1-213ENST00000555386 PLA2G12BQ9BX93 195 aa12.31□□□□□ -0.44
PSEN1-213ENST00000555386 UTYO14607 1347 aa12.3□□□□□ -0.44
PSEN1-213ENST00000555386 KDM2BQ8NHM5 1336 aa12.3□□□□□ -0.44
PSEN1-213ENST00000555386 ANKRD18BA2A2Z9 1011 aa12.3□□□□□ -0.44
PSEN1-213ENST00000555386 GNAI3P08754 354 aa12.3□□□□□ -0.44
PSEN1-213ENST00000555386 RPS8P62241 208 aaKnown RBP12.3□□□□□ -0.44
PSEN1-213ENST00000555386 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
PSEN1-213ENST00000555386 PDE3AQ14432 1141 aa12.3□□□□□ -0.44
PSEN1-213ENST00000555386 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
PSEN1-213ENST00000555386 CHD4Q14839 1912 aa12.3□□□□□ -0.44
PSEN1-213ENST00000555386 BBOX1O75936 387 aa12.29□□□□□ -0.44
PSEN1-213ENST00000555386 CSF1RP07333 972 aa12.29□□□□□ -0.44
PSEN1-213ENST00000555386 AAMPQ13685 434 aa12.29□□□□□ -0.44
PSEN1-213ENST00000555386 CCDC93Q567U6 631 aa12.29□□□□□ -0.44
PSEN1-213ENST00000555386 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
PSEN1-213ENST00000555386 CDC5LQ99459 802 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms