RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 GJD4Q96KN9 370 aaPredicted RBP17.57■□□□□ 0.4
IFT43-209ENST00000555305 SNRKQ9NRH2 765 aa17.57■□□□□ 0.4
IFT43-209ENST00000555305 DBNLQ9UJU6 430 aaKnown RBP17.57■□□□□ 0.4
IFT43-209ENST00000555305 TBC1D2BQ9UPU7 963 aa17.57■□□□□ 0.4
IFT43-209ENST00000555305 IRS4O14654 1257 aaPredicted RBP17.56■□□□□ 0.4
IFT43-209ENST00000555305 ITPK1Q13572 414 aa17.56■□□□□ 0.4
IFT43-209ENST00000555305 TRPC5Q9UL62 973 aaPredicted RBP17.56■□□□□ 0.4
IFT43-209ENST00000555305 ANKRD18BA2A2Z9 1011 aa17.56■□□□□ 0.4
IFT43-209ENST00000555305 ONECUT3O60422 494 aaPredicted RBP17.56■□□□□ 0.4
IFT43-209ENST00000555305 GPTP24298 496 aa17.56■□□□□ 0.4
IFT43-209ENST00000555305 CWC27Q6UX04 472 aaKnown RBP17.56■□□□□ 0.4
IFT43-209ENST00000555305 HAUS7Q99871 368 aa17.56■□□□□ 0.4
IFT43-209ENST00000555305 FSD1Q9BTV5 496 aa17.56■□□□□ 0.4
IFT43-209ENST00000555305 TLR7Q9NYK1 1049 aaKnown RBP17.56■□□□□ 0.4
IFT43-209ENST00000555305 SH3TC1Q8TE82 1336 aa17.55■□□□□ 0.4
IFT43-209ENST00000555305 HMGB2P26583 209 aaKnown RBP17.55■□□□□ 0.4
IFT43-209ENST00000555305 LRRFIP1Q32MZ4 808 aaKnown RBP17.55■□□□□ 0.4
IFT43-209ENST00000555305 RC3H1Q5TC82 1133 aaKnown RBP17.55■□□□□ 0.4
IFT43-209ENST00000555305 TTLL11Q8NHH1 800 aa17.55■□□□□ 0.4
IFT43-209ENST00000555305 UTP14AQ9BVJ6 771 aaKnown RBP17.55■□□□□ 0.4
IFT43-209ENST00000555305 BOLA2Q9H3K6 86 aa17.55■□□□□ 0.4
IFT43-209ENST00000555305 KCNQ2O43526 872 aa17.54■□□□□ 0.4
IFT43-209ENST00000555305 NFKBIBQ15653 356 aa17.54■□□□□ 0.4
IFT43-209ENST00000555305 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.54■□□□□ 0.4
IFT43-209ENST00000555305 KAT6BQ8WYB5 2073 aa17.54■□□□□ 0.4
IFT43-209ENST00000555305 ZNF609O15014 1411 aa17.54■□□□□ 0.4
IFT43-209ENST00000555305 CAMTA2O94983 1202 aa17.53■□□□□ 0.4
IFT43-209ENST00000555305 HSPA1LP34931 641 aa17.53■□□□□ 0.4
IFT43-209ENST00000555305 LSG1Q9H089 658 aaKnown RBP17.53■□□□□ 0.4
IFT43-209ENST00000555305 ATRNO75882 1429 aa17.53■□□□□ 0.4
IFT43-209ENST00000555305 COL5A3P25940 1745 aaPredicted RBP17.53■□□□□ 0.4
IFT43-209ENST00000555305 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
IFT43-209ENST00000555305 NHSQ6T4R5 1651 aa17.53■□□□□ 0.4
IFT43-209ENST00000555305 DBNDD2Q9BQY9 259 aa17.53■□□□□ 0.4
IFT43-209ENST00000555305 NUP98P52948 1817 aa17.52■□□□□ 0.4
IFT43-209ENST00000555305 AFF2P51816 1311 aa17.52■□□□□ 0.4
IFT43-209ENST00000555305 UBN2Q6ZU65 1347 aa17.52■□□□□ 0.4
IFT43-209ENST00000555305 ITGA6P23229 1130 aa17.52■□□□□ 0.4
IFT43-209ENST00000555305 CCDC158Q5M9N0 1113 aa17.52■□□□□ 0.4
IFT43-209ENST00000555305 NEUROD6Q96NK8 337 aa17.52■□□□□ 0.4
IFT43-209ENST00000555305 CWC22Q9HCG8 908 aaKnown RBP17.52■□□□□ 0.4
IFT43-209ENST00000555305 A0A1B0GUL7 405 aa17.51■□□□□ 0.39
IFT43-209ENST00000555305 DDIT3P35638 169 aa17.51■□□□□ 0.39
IFT43-209ENST00000555305 LRRC24Q50LG9 513 aa17.51■□□□□ 0.39
IFT43-209ENST00000555305 NEK4P51957 841 aa17.51■□□□□ 0.39
IFT43-209ENST00000555305 RNF20Q5VTR2 975 aa17.51■□□□□ 0.39
IFT43-209ENST00000555305 LDHAL6AQ6ZMR3 332 aa17.51■□□□□ 0.39
IFT43-209ENST00000555305 RTL9Q8NET4 1388 aa17.5■□□□□ 0.39
IFT43-209ENST00000555305 SPEF2Q9C093 1822 aa17.5■□□□□ 0.39
IFT43-209ENST00000555305 ZKSCAN1P17029 563 aaPredicted RBP17.5■□□□□ 0.39
IFT43-209ENST00000555305 ZNF594Q96JF6 807 aaPredicted RBP17.5■□□□□ 0.39
IFT43-209ENST00000555305 CCDC171Q6TFL3 1326 aa17.49■□□□□ 0.39
IFT43-209ENST00000555305 MROH5Q6ZUA9 1318 aa17.49■□□□□ 0.39
IFT43-209ENST00000555305 CD2BP2O95400 341 aaKnown RBP17.49■□□□□ 0.39
IFT43-209ENST00000555305 CCDC152Q4G0S7 254 aa17.49■□□□□ 0.39
IFT43-209ENST00000555305 GORABQ5T7V8 394 aa17.49■□□□□ 0.39
IFT43-209ENST00000555305 KBTBD3Q8NAB2 608 aa17.49■□□□□ 0.39
IFT43-209ENST00000555305 NIP7Q9Y221 180 aaKnown RBP eCLIP17.49■□□□□ 0.39
IFT43-209ENST00000555305 RIPOR2Q9Y4F9 1068 aa17.49■□□□□ 0.39
IFT43-209ENST00000555305 NMIQ13287 307 aaPredicted RBP17.48■□□□□ 0.39
IFT43-209ENST00000555305 SUSD4Q5VX71 490 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 LINC00116Q8NCU8 138 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 KCNB2Q92953 911 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 ZNF512BQ96KM6 892 aaPredicted RBP17.48■□□□□ 0.39
IFT43-209ENST00000555305 GREM2Q9H772 168 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 CNNM1Q9NRU3 951 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 MED23Q9ULK4 1368 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 METTL24Q5JXM2 366 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 DNAJC2Q99543 621 aaKnown RBP17.48■□□□□ 0.39
IFT43-209ENST00000555305 TM6SF1Q9BZW5 370 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 IL25Q9H293 177 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 PAG1Q9NWQ8 432 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 HMG20BQ9P0W2 317 aa17.48■□□□□ 0.39
IFT43-209ENST00000555305 MYH3P11055 1940 aa17.47■□□□□ 0.39
IFT43-209ENST00000555305 IFIT1P09914 478 aaKnown RBP17.47■□□□□ 0.39
IFT43-209ENST00000555305 TIMM10P62072 90 aa17.47■□□□□ 0.39
IFT43-209ENST00000555305 MAP4K1Q92918 833 aa17.47■□□□□ 0.39
IFT43-209ENST00000555305 PUS3Q9BZE2 481 aaKnown RBP17.47■□□□□ 0.39
IFT43-209ENST00000555305 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
IFT43-209ENST00000555305 BCORQ6W2J9 1755 aa17.47■□□□□ 0.39
IFT43-209ENST00000555305 NTSR2O95665 410 aa17.46■□□□□ 0.39
IFT43-209ENST00000555305 TTC39AQ5SRH9 613 aa17.46■□□□□ 0.39
IFT43-209ENST00000555305 HELLSQ9NRZ9 838 aa17.46■□□□□ 0.39
IFT43-209ENST00000555305 CCNL1Q9UK58 526 aaPredicted RBP17.46■□□□□ 0.39
IFT43-209ENST00000555305 ZFYP08048 801 aaPredicted RBP17.45■□□□□ 0.38
IFT43-209ENST00000555305 PTMSP20962 102 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 PSMA5P28066 241 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 KCNJ4P48050 445 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 NUCB2P80303 420 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 ATP2B3Q16720 1220 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 INTS4Q96HW7 963 aaKnown RBP17.45■□□□□ 0.38
IFT43-209ENST00000555305 NYXQ9GZU5 481 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 SNX14Q9Y5W7 946 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 LRP5O75197 1615 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 PDE8BO95263 885 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 MCMDC2Q4G0Z9 681 aa17.45■□□□□ 0.38
IFT43-209ENST00000555305 SEPT12Q8IYM1 358 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms