RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 SENP2Q9HC62 589 aa8.43□□□□□ -1.06
PSEN1-211ENST00000554995 ZFYVE28Q9HCC9 887 aa8.43□□□□□ -1.06
PSEN1-211ENST00000554995 A0A1B0GTH6 734 aa8.42□□□□□ -1.06
PSEN1-211ENST00000554995 RHOQP17081 205 aa8.42□□□□□ -1.06
PSEN1-211ENST00000554995 GRNP28799 593 aaKnown RBP8.42□□□□□ -1.06
PSEN1-211ENST00000554995 EPS8L3Q8TE67 593 aaKnown RBP8.42□□□□□ -1.06
PSEN1-211ENST00000554995 OSBPL7Q9BZF2 842 aa8.42□□□□□ -1.06
PSEN1-211ENST00000554995 C12orf49Q9H741 205 aa8.42□□□□□ -1.06
PSEN1-211ENST00000554995 ELP3Q9H9T3 547 aa8.42□□□□□ -1.06
PSEN1-211ENST00000554995 TIMMDC1Q9NPL8 285 aa8.42□□□□□ -1.06
PSEN1-211ENST00000554995 TMEM63CQ9P1W3 806 aa8.42□□□□□ -1.06
PSEN1-211ENST00000554995 PHACTR2O75167 634 aa8.41□□□□□ -1.06
PSEN1-211ENST00000554995 TYRO3Q06418 890 aa8.41□□□□□ -1.06
PSEN1-211ENST00000554995 ACBD3Q9H3P7 528 aa8.41□□□□□ -1.06
PSEN1-211ENST00000554995 CAPN10Q9HC96 672 aa8.41□□□□□ -1.06
PSEN1-211ENST00000554995 NLRP2Q9NX02 1062 aa8.41□□□□□ -1.06
PSEN1-211ENST00000554995 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.41□□□□□ -1.06
PSEN1-211ENST00000554995 A0A1W2PNR3 127 aa8.4□□□□□ -1.06
PSEN1-211ENST00000554995 GIPC1O14908 333 aa8.4□□□□□ -1.06
PSEN1-211ENST00000554995 MRPL14Q6P1L8 145 aaKnown RBP8.4□□□□□ -1.06
PSEN1-211ENST00000554995 SLC16A10Q8TF71 515 aa8.4□□□□□ -1.06
PSEN1-211ENST00000554995 KIFC2Q96AC6 838 aa8.4□□□□□ -1.06
PSEN1-211ENST00000554995 NPHS2Q9NP85 383 aa8.4□□□□□ -1.06
PSEN1-211ENST00000554995 POLR3DP05423 398 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-211ENST00000554995 EPB42P16452 691 aa8.39□□□□□ -1.07
PSEN1-211ENST00000554995 TNNI2P48788 182 aa8.39□□□□□ -1.07
PSEN1-211ENST00000554995 SLC43A3Q8NBI5 491 aa8.39□□□□□ -1.07
PSEN1-211ENST00000554995 CEP63Q96MT8 703 aa8.39□□□□□ -1.07
PSEN1-211ENST00000554995 CHRDQ9H2X0 955 aa8.39□□□□□ -1.07
PSEN1-211ENST00000554995 TTLL8A6PVC2 850 aa8.38□□□□□ -1.07
PSEN1-211ENST00000554995 XYLBO75191 536 aa8.38□□□□□ -1.07
PSEN1-211ENST00000554995 GSK3AP49840 483 aa8.38□□□□□ -1.07
PSEN1-211ENST00000554995 ZNF394Q53GI3 561 aa8.38□□□□□ -1.07
PSEN1-211ENST00000554995 TANGO6Q9C0B7 1094 aa8.38□□□□□ -1.07
PSEN1-211ENST00000554995 DDX41Q9UJV9 622 aaKnown RBP8.38□□□□□ -1.07
PSEN1-211ENST00000554995 GJA3Q9Y6H8 435 aa8.38□□□□□ -1.07
PSEN1-211ENST00000554995 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
PSEN1-211ENST00000554995 EREGO14944 169 aa8.37□□□□□ -1.07
PSEN1-211ENST00000554995 USP17L7P0C7H9 530 aa8.37□□□□□ -1.07
PSEN1-211ENST00000554995 PTPN12Q05209 780 aaKnown RBP8.37□□□□□ -1.07
PSEN1-211ENST00000554995 MEI1Q5TIA1 1274 aa8.37□□□□□ -1.07
PSEN1-211ENST00000554995 GALNT12Q8IXK2 581 aa8.37□□□□□ -1.07
PSEN1-211ENST00000554995 C1orf127Q8N9H9 656 aa8.37□□□□□ -1.07
PSEN1-211ENST00000554995 CRISPLD1Q9H336 500 aa8.37□□□□□ -1.07
PSEN1-211ENST00000554995 CNTN3Q9P232 1028 aa8.37□□□□□ -1.07
PSEN1-211ENST00000554995 FAM8A1Q9UBU6 413 aa8.37□□□□□ -1.07
PSEN1-211ENST00000554995 PCDHGB7Q9Y5F8 929 aa8.37□□□□□ -1.07
PSEN1-211ENST00000554995 FIGNL2A6NMB9 653 aa8.36□□□□□ -1.07
PSEN1-211ENST00000554995 RACK1P63244 317 aaKnown RBP8.36□□□□□ -1.07
PSEN1-211ENST00000554995 NXPE4Q6UWF7 544 aa8.36□□□□□ -1.07
PSEN1-211ENST00000554995 HS2ST1Q7LGA3 356 aa8.36□□□□□ -1.07
PSEN1-211ENST00000554995 USP48Q86UV5 1035 aa8.36□□□□□ -1.07
PSEN1-211ENST00000554995 ZNF654Q8IZM8 581 aa8.36□□□□□ -1.07
PSEN1-211ENST00000554995 BCO2Q9BYV7 579 aa8.36□□□□□ -1.07
PSEN1-211ENST00000554995 RUBCNLQ9H714 662 aa8.36□□□□□ -1.07
PSEN1-211ENST00000554995 GPAMQ9HCL2 828 aa8.36□□□□□ -1.07
PSEN1-211ENST00000554995 ABI2Q9NYB9 513 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-211ENST00000554995 NXF1Q9UBU9 619 aaKnown RBP8.36□□□□□ -1.07
PSEN1-211ENST00000554995 PRKAG2Q9UGJ0 569 aa8.36□□□□□ -1.07
PSEN1-211ENST00000554995 GGT7Q9UJ14 662 aa8.36□□□□□ -1.07
PSEN1-211ENST00000554995 SOS2Q07890 1332 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-211ENST00000554995 GADD45BO75293 160 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-211ENST00000554995 EGFRP00533 1210 aa8.35□□□□□ -1.07
PSEN1-211ENST00000554995 KCNMA1Q12791 1236 aa8.35□□□□□ -1.07
PSEN1-211ENST00000554995 GNL2Q13823 731 aaKnown RBP8.35□□□□□ -1.07
PSEN1-211ENST00000554995 TAF1CQ15572 869 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-211ENST00000554995 NLRP13Q86W25 1043 aa8.35□□□□□ -1.07
PSEN1-211ENST00000554995 IRF7Q92985 503 aa8.35□□□□□ -1.07
PSEN1-211ENST00000554995 SRCIN1Q9C0H9 1055 aa8.35□□□□□ -1.07
PSEN1-211ENST00000554995 BRD7Q9NPI1 651 aa8.35□□□□□ -1.07
PSEN1-211ENST00000554995 BMP1P13497 986 aa8.34□□□□□ -1.07
PSEN1-211ENST00000554995 ST13P50502 369 aaKnown RBP8.34□□□□□ -1.07
PSEN1-211ENST00000554995 SCARF1Q14162 830 aa8.34□□□□□ -1.07
PSEN1-211ENST00000554995 NPAS3Q8IXF0 933 aa8.34□□□□□ -1.07
PSEN1-211ENST00000554995 ZCCHC2Q9C0B9 1178 aaKnown RBP8.34□□□□□ -1.07
PSEN1-211ENST00000554995 SUV39H2Q9H5I1 410 aa8.34□□□□□ -1.07
PSEN1-211ENST00000554995 SRA1Q9HD15 236 aaKnown RBP8.34□□□□□ -1.07
PSEN1-211ENST00000554995 C11orf16Q9NQ32 467 aa8.34□□□□□ -1.07
PSEN1-211ENST00000554995 VEGFBP49765 207 aa8.33□□□□□ -1.08
PSEN1-211ENST00000554995 GRM2Q14416 872 aa8.33□□□□□ -1.08
PSEN1-211ENST00000554995 SAMD5Q5TGI4 173 aa8.33□□□□□ -1.08
PSEN1-211ENST00000554995 NLRP8Q86W28 1048 aa8.33□□□□□ -1.08
PSEN1-211ENST00000554995 FAM177A1Q8N128 213 aaPredicted RBP8.33□□□□□ -1.08
PSEN1-211ENST00000554995 PGBD3Q8N328 593 aa8.33□□□□□ -1.08
PSEN1-211ENST00000554995 INPP5FQ9Y2H2 1132 aa8.33□□□□□ -1.08
PSEN1-211ENST00000554995 DYRK1BQ9Y463 629 aa8.33□□□□□ -1.08
PSEN1-211ENST00000554995 F11P03951 625 aa8.32□□□□□ -1.08
PSEN1-211ENST00000554995 CES1P23141 567 aa8.32□□□□□ -1.08
PSEN1-211ENST00000554995 DNAJA1P31689 397 aaKnown RBP8.32□□□□□ -1.08
PSEN1-211ENST00000554995 TTC39BQ5VTQ0 682 aaPredicted RBP8.32□□□□□ -1.08
PSEN1-211ENST00000554995 TRIM46Q7Z4K8 759 aa8.32□□□□□ -1.08
PSEN1-211ENST00000554995 PMEPA1Q969W9 287 aa8.32□□□□□ -1.08
PSEN1-211ENST00000554995 GMLQ99445 158 aa8.32□□□□□ -1.08
PSEN1-211ENST00000554995 KRTAP4-8Q9BYQ9 185 aa8.32□□□□□ -1.08
PSEN1-211ENST00000554995 CYP2E1P05181 493 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-211ENST00000554995 ATP2B1P20020 1258 aa8.31□□□□□ -1.08
PSEN1-211ENST00000554995 XP32Q5T750 250 aa8.31□□□□□ -1.08
PSEN1-211ENST00000554995 DHX38Q92620 1227 aaKnown RBP8.31□□□□□ -1.08
PSEN1-211ENST00000554995 GAS2L1Q99501 681 aaPredicted RBP8.31□□□□□ -1.08
PSEN1-211ENST00000554995 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms