RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 HELBQ8NG08 1087 aaPredicted RBP6.78□□□□□ -1.32
ATXN3-231ENST00000554994 RNF217Q8TC41 542 aa6.78□□□□□ -1.32
ATXN3-231ENST00000554994 SLC10A4Q96EP9 437 aa6.78□□□□□ -1.32
ATXN3-231ENST00000554994 DCAF5Q96JK2 942 aa6.78□□□□□ -1.32
ATXN3-231ENST00000554994 STK32BQ9NY57 414 aa6.78□□□□□ -1.32
ATXN3-231ENST00000554994 LIMD1Q9UGP4 676 aa6.78□□□□□ -1.32
ATXN3-231ENST00000554994 MAP3K5Q99683 1374 aa6.78□□□□□ -1.32
ATXN3-231ENST00000554994 PHF20L1A8MW92 1017 aa6.77□□□□□ -1.33
ATXN3-231ENST00000554994 RAB15P59190 212 aa6.77□□□□□ -1.33
ATXN3-231ENST00000554994 NEDD1Q8NHV4 660 aa6.77□□□□□ -1.33
ATXN3-231ENST00000554994 ARHGAP9Q9BRR9 750 aa6.77□□□□□ -1.33
ATXN3-231ENST00000554994 RAB3GAP2Q9H2M9 1393 aa6.77□□□□□ -1.33
ATXN3-231ENST00000554994 TNS2Q63HR2 1409 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 GPR25O00155 361 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 DHX9Q08211 1270 aaKnown RBP6.76□□□□□ -1.33
ATXN3-231ENST00000554994 GAS6Q14393 721 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 CHRNA2Q15822 529 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 BARGINQ6ZT62 677 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.76□□□□□ -1.33
ATXN3-231ENST00000554994 PODNQ7Z5L7 613 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 PARP9Q8IXQ6 854 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 KLRG1Q96E93 195 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 KRTAP4-8Q9BYQ9 185 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 PRDM11Q9NQV5 511 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 CUEDC1Q9NWM3 386 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-231ENST00000554994 ARHGEF10O15013 1369 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 KIF1AQ12756 1690 aa6.76□□□□□ -1.33
ATXN3-231ENST00000554994 ADCY9O60503 1353 aa6.75□□□□□ -1.33
ATXN3-231ENST00000554994 PSME1Q06323 249 aa6.75□□□□□ -1.33
ATXN3-231ENST00000554994 SLC15A2Q16348 729 aa6.75□□□□□ -1.33
ATXN3-231ENST00000554994 RTL5Q5HYW3 569 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-231ENST00000554994 ZBTB33Q86T24 672 aa6.75□□□□□ -1.33
ATXN3-231ENST00000554994 TMPRSS4Q9NRS4 437 aa6.75□□□□□ -1.33
ATXN3-231ENST00000554994 CLTCL1P53675 1640 aa6.75□□□□□ -1.33
ATXN3-231ENST00000554994 GOLGB1Q14789 3259 aaKnown RBP6.75□□□□□ -1.33
ATXN3-231ENST00000554994 ACIN1Q9UKV3 1341 aaKnown RBP6.75□□□□□ -1.33
ATXN3-231ENST00000554994 SBNO1A3KN83 1393 aa6.74□□□□□ -1.33
ATXN3-231ENST00000554994 WDR90Q96KV7 1748 aa6.74□□□□□ -1.33
ATXN3-231ENST00000554994 ITGB2P05107 769 aa6.74□□□□□ -1.33
ATXN3-231ENST00000554994 INTS6LQ5JSJ4 861 aaKnown RBP6.74□□□□□ -1.33
ATXN3-231ENST00000554994 WAPLQ7Z5K2 1190 aa6.74□□□□□ -1.33
ATXN3-231ENST00000554994 BEND7Q8N7W2 519 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-231ENST00000554994 JMYQ8N9B5 988 aa6.74□□□□□ -1.33
ATXN3-231ENST00000554994 GPKOWQ92917 476 aaPredicted RBP eCLIP6.74□□□□□ -1.33
ATXN3-231ENST00000554994 RGPD3A6NKT7 1758 aaPredicted RBP6.74□□□□□ -1.33
ATXN3-231ENST00000554994 RGPD4Q7Z3J3 1758 aa6.74□□□□□ -1.33
ATXN3-231ENST00000554994 PLEKHH1Q9ULM0 1364 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 PLSCR1O15162 318 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 GRIN3BO60391 1043 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 LILRB3O75022 631 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 HSPA1AP0DMV8 641 aaKnown RBP6.73□□□□□ -1.33
ATXN3-231ENST00000554994 HSPA1BP0DMV9 641 aaKnown RBP6.73□□□□□ -1.33
ATXN3-231ENST00000554994 RHOQP17081 205 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 NEUROD1Q13562 356 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 FOXD4L5Q5VV16 416 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-231ENST00000554994 MYSM1Q5VVJ2 828 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 PRICKLE2Q7Z3G6 844 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 PCGF6Q9BYE7 350 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 STK26Q9P289 416 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 FMN2Q9NZ56 1722 aa6.73□□□□□ -1.33
ATXN3-231ENST00000554994 PPLO60437 1756 aa6.72□□□□□ -1.33
ATXN3-231ENST00000554994 K7ELQ4 463 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-231ENST00000554994 ZMYND10O75800 440 aa6.72□□□□□ -1.33
ATXN3-231ENST00000554994 PROCP04070 461 aa6.72□□□□□ -1.33
ATXN3-231ENST00000554994 TXNRD1Q16881 649 aa6.72□□□□□ -1.33
ATXN3-231ENST00000554994 RIPOR1Q6ZS17 1223 aa6.72□□□□□ -1.33
ATXN3-231ENST00000554994 LYSMD3Q7Z3D4 306 aa6.72□□□□□ -1.33
ATXN3-231ENST00000554994 MBIPQ9NS73 344 aa6.72□□□□□ -1.33
ATXN3-231ENST00000554994 CDV3Q9UKY7 258 aaKnown RBP6.72□□□□□ -1.33
ATXN3-231ENST00000554994 PRAG1Q86YV5 1406 aa6.72□□□□□ -1.33
ATXN3-231ENST00000554994 AATKQ6ZMQ8 1374 aa6.71□□□□□ -1.33
ATXN3-231ENST00000554994 KIAA0232Q92628 1395 aa6.71□□□□□ -1.33
ATXN3-231ENST00000554994 OVOS2A0A0G2JMS6 1433 aa6.71□□□□□ -1.34
ATXN3-231ENST00000554994 OVOS2A0A0J9YW53 1432 aa6.71□□□□□ -1.34
ATXN3-231ENST00000554994 OVOS2Q6IE36 1432 aa6.71□□□□□ -1.34
ATXN3-231ENST00000554994 BCRP11274 1271 aa6.71□□□□□ -1.34
ATXN3-231ENST00000554994 PDXDC2PQ6P474 469 aa6.71□□□□□ -1.34
ATXN3-231ENST00000554994 PMFBP1Q8TBY8 1022 aa6.71□□□□□ -1.34
ATXN3-231ENST00000554994 ZNF837Q96EG3 531 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-231ENST00000554994 PEAK1Q9H792 1746 aa6.7□□□□□ -1.34
ATXN3-231ENST00000554994 RGPD8O14715 1765 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-231ENST00000554994 SSH2Q76I76 1423 aa6.7□□□□□ -1.34
ATXN3-231ENST00000554994 POLD1P28340 1107 aa6.7□□□□□ -1.34
ATXN3-231ENST00000554994 CTDSPL2Q05D32 466 aa6.7□□□□□ -1.34
ATXN3-231ENST00000554994 FOXR1Q6PIV2 292 aa6.7□□□□□ -1.34
ATXN3-231ENST00000554994 LARP1Q6PKG0 1096 aaKnown RBP6.7□□□□□ -1.34
ATXN3-231ENST00000554994 TCP11L2Q8N4U5 519 aa6.7□□□□□ -1.34
ATXN3-231ENST00000554994 DCAF11Q8TEB1 546 aa6.7□□□□□ -1.34
ATXN3-231ENST00000554994 NRXN1Q9ULB1 1477 aa6.7□□□□□ -1.34
ATXN3-231ENST00000554994 TOPAZ1Q8N9V7 1692 aa6.69□□□□□ -1.34
ATXN3-231ENST00000554994 TOMM70O94826 608 aa6.69□□□□□ -1.34
ATXN3-231ENST00000554994 ADH1AP07327 375 aa6.69□□□□□ -1.34
ATXN3-231ENST00000554994 PTGIRP43119 386 aa6.69□□□□□ -1.34
ATXN3-231ENST00000554994 EVA1CP58658 441 aa6.69□□□□□ -1.34
ATXN3-231ENST00000554994 ZC3H6P61129 1189 aaKnown RBP6.69□□□□□ -1.34
ATXN3-231ENST00000554994 ZNF827Q17R98 1081 aa6.69□□□□□ -1.34
ATXN3-231ENST00000554994 ZC3H15Q8WU90 426 aaKnown RBP6.69□□□□□ -1.34
ATXN3-231ENST00000554994 FKBPLQ9UIM3 349 aa6.69□□□□□ -1.34
ATXN3-231ENST00000554994 SBF2Q86WG5 1849 aa6.69□□□□□ -1.34
ATXN3-231ENST00000554994 TRPM3Q9HCF6 1732 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms