RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 ABCC4O15439 1325 aa17.5■□□□□ 0.39
TUBB3-207ENST00000554927 PARP10Q53GL7 1025 aa17.5■□□□□ 0.39
TUBB3-207ENST00000554927 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
TUBB3-207ENST00000554927 RTFDC1Q9BY42 306 aaPredicted RBP17.5■□□□□ 0.39
TUBB3-207ENST00000554927 LAMB4A4D0S4 1761 aa17.49■□□□□ 0.39
TUBB3-207ENST00000554927 SHTN1A0MZ66 631 aa17.49■□□□□ 0.39
TUBB3-207ENST00000554927 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
TUBB3-207ENST00000554927 DLK2Q6UY11 383 aa17.49■□□□□ 0.39
TUBB3-207ENST00000554927 GIGYF2Q6Y7W6 1299 aaKnown RBP17.49■□□□□ 0.39
TUBB3-207ENST00000554927 MICALL2Q8IY33 904 aa17.49■□□□□ 0.39
TUBB3-207ENST00000554927 PDE4DIPQ5VU43 2346 aa17.49■□□□□ 0.39
TUBB3-207ENST00000554927 NUP98P52948 1817 aa17.49■□□□□ 0.39
TUBB3-207ENST00000554927 TNRC18O15417 2968 aaPredicted RBP17.49■□□□□ 0.39
TUBB3-207ENST00000554927 BBOX1O75936 387 aa17.48■□□□□ 0.39
TUBB3-207ENST00000554927 NEFMP07197 916 aa17.48■□□□□ 0.39
TUBB3-207ENST00000554927 RGMBQ6NW40 437 aa17.48■□□□□ 0.39
TUBB3-207ENST00000554927 SP8Q8IXZ3 490 aa17.48■□□□□ 0.39
TUBB3-207ENST00000554927 C2orf69Q8N8R5 385 aa17.48■□□□□ 0.39
TUBB3-207ENST00000554927 EIF4A1P60842 406 aaKnown RBP17.47■□□□□ 0.39
TUBB3-207ENST00000554927 KIF23Q02241 960 aaPredicted RBP17.47■□□□□ 0.39
TUBB3-207ENST00000554927 KRT26Q7Z3Y9 468 aa17.47■□□□□ 0.39
TUBB3-207ENST00000554927 CCDC102AQ96A19 550 aa17.47■□□□□ 0.39
TUBB3-207ENST00000554927 GBA2Q9HCG7 927 aaPredicted RBP17.47■□□□□ 0.39
TUBB3-207ENST00000554927 SAGE1Q9NXZ1 904 aa17.47■□□□□ 0.39
TUBB3-207ENST00000554927 TRPA1O75762 1119 aa17.46■□□□□ 0.39
TUBB3-207ENST00000554927 ZNF157P51786 506 aaPredicted RBP17.46■□□□□ 0.39
TUBB3-207ENST00000554927 TBC1D10BQ4KMP7 808 aaPredicted RBP17.46■□□□□ 0.39
TUBB3-207ENST00000554927 DDX46Q7L014 1031 aaKnown RBP17.46■□□□□ 0.39
TUBB3-207ENST00000554927 SAMD7Q7Z3H4 446 aa17.46■□□□□ 0.39
TUBB3-207ENST00000554927 ZBTB12Q9Y330 459 aaPredicted RBP17.46■□□□□ 0.39
TUBB3-207ENST00000554927 YDJCA8MPS7 323 aa17.45■□□□□ 0.38
TUBB3-207ENST00000554927 HCLS1P14317 486 aaPredicted RBP17.45■□□□□ 0.38
TUBB3-207ENST00000554927 SLC10A5Q5PT55 438 aa17.45■□□□□ 0.38
TUBB3-207ENST00000554927 DCPSQ96C86 337 aaKnown RBP17.45■□□□□ 0.38
TUBB3-207ENST00000554927 RNF186Q9NXI6 227 aa17.45■□□□□ 0.38
TUBB3-207ENST00000554927 FAM155AB1AL88 458 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-207ENST00000554927 RBM26Q5T8P6 1007 aaKnown RBP17.44■□□□□ 0.38
TUBB3-207ENST00000554927 PRPF38BQ5VTL8 546 aaKnown RBP17.44■□□□□ 0.38
TUBB3-207ENST00000554927 THUMPD2Q9BTF0 503 aaKnown RBP17.44■□□□□ 0.38
TUBB3-207ENST00000554927 ADM5C9JUS6 153 aa17.43■□□□□ 0.38
TUBB3-207ENST00000554927 PPP2R1AP30153 589 aa17.43■□□□□ 0.38
TUBB3-207ENST00000554927 ERBB4Q15303 1308 aa17.43■□□□□ 0.38
TUBB3-207ENST00000554927 PSMD14O00487 310 aa17.42■□□□□ 0.38
TUBB3-207ENST00000554927 EIF2S2P20042 333 aaKnown RBP17.42■□□□□ 0.38
TUBB3-207ENST00000554927 GRAPQ13588 217 aa17.42■□□□□ 0.38
TUBB3-207ENST00000554927 CTU1Q7Z7A3 348 aaKnown RBP17.42■□□□□ 0.38
TUBB3-207ENST00000554927 GRAPLQ8TC17 118 aaPredicted RBP17.42■□□□□ 0.38
TUBB3-207ENST00000554927 DPF2Q92785 391 aa17.42■□□□□ 0.38
TUBB3-207ENST00000554927 WASHC4Q2M389 1173 aa17.41■□□□□ 0.38
TUBB3-207ENST00000554927 DBNDD1Q9H9R9 158 aa17.41■□□□□ 0.38
TUBB3-207ENST00000554927 TRMT112Q9UI30 125 aaKnown RBP17.41■□□□□ 0.38
TUBB3-207ENST00000554927 RIMBP2O15034 1052 aa17.4■□□□□ 0.38
TUBB3-207ENST00000554927 SULF1Q8IWU6 871 aa17.4■□□□□ 0.38
TUBB3-207ENST00000554927 KDM3BQ7LBC6 1761 aa17.39■□□□□ 0.37
TUBB3-207ENST00000554927 C6orf229H3BNL8 230 aa17.39■□□□□ 0.37
TUBB3-207ENST00000554927 EGFRP00533 1210 aa17.39■□□□□ 0.37
TUBB3-207ENST00000554927 ANXA1P04083 346 aa17.39■□□□□ 0.37
TUBB3-207ENST00000554927 SLC10A3P09131 477 aa17.39■□□□□ 0.37
TUBB3-207ENST00000554927 AIMP1Q12904 312 aaKnown RBP17.39■□□□□ 0.37
TUBB3-207ENST00000554927 HSP90AB3PQ58FF7 597 aa17.39■□□□□ 0.37
TUBB3-207ENST00000554927 TMC4Q7Z404 712 aa17.39■□□□□ 0.37
TUBB3-207ENST00000554927 NSFL1CQ9UNZ2 370 aaKnown RBP17.39■□□□□ 0.37
TUBB3-207ENST00000554927 RPS12P25398 132 aaKnown RBP17.38■□□□□ 0.37
TUBB3-207ENST00000554927 KIF4BQ2VIQ3 1234 aa17.38■□□□□ 0.37
TUBB3-207ENST00000554927 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
TUBB3-207ENST00000554927 ZNF428Q96B54 188 aa17.38■□□□□ 0.37
TUBB3-207ENST00000554927 CSRNP1Q96S65 589 aa17.38■□□□□ 0.37
TUBB3-207ENST00000554927 TSPYL4Q9UJ04 414 aa17.38■□□□□ 0.37
TUBB3-207ENST00000554927 SH3TC1Q8TE82 1336 aa17.38■□□□□ 0.37
TUBB3-207ENST00000554927 DOK7Q18PE1 504 aa17.37■□□□□ 0.37
TUBB3-207ENST00000554927 PROSER3Q2NL68 480 aa17.37■□□□□ 0.37
TUBB3-207ENST00000554927 GGA3Q9NZ52 723 aa17.37■□□□□ 0.37
TUBB3-207ENST00000554927 HDAC9Q9UKV0 1011 aa17.37■□□□□ 0.37
TUBB3-207ENST00000554927 HPS5Q9UPZ3 1129 aa17.37■□□□□ 0.37
TUBB3-207ENST00000554927 ECE2O60344 883 aa17.36■□□□□ 0.37
TUBB3-207ENST00000554927 PDIA6Q15084 440 aa17.36■□□□□ 0.37
TUBB3-207ENST00000554927 NFE2L2Q16236 605 aa17.36■□□□□ 0.37
TUBB3-207ENST00000554927 COPS6Q7L5N1 327 aa17.36■□□□□ 0.37
TUBB3-207ENST00000554927 NECTIN2Q92692 538 aa17.36■□□□□ 0.37
TUBB3-207ENST00000554927 G3V3G9 751 aa17.35■□□□□ 0.37
TUBB3-207ENST00000554927 DCAF8Q5TAQ9 597 aa17.35■□□□□ 0.37
TUBB3-207ENST00000554927 LRP10Q7Z4F1 713 aa17.35■□□□□ 0.37
TUBB3-207ENST00000554927 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-207ENST00000554927 XAGE3Q8WTP9 111 aa17.35■□□□□ 0.37
TUBB3-207ENST00000554927 CDCA5Q96FF9 252 aa17.35■□□□□ 0.37
TUBB3-207ENST00000554927 EYA3Q99504 573 aa17.35■□□□□ 0.37
TUBB3-207ENST00000554927 KCNQ5Q9NR82 932 aa17.35■□□□□ 0.37
TUBB3-207ENST00000554927 DUOX1Q9NRD9 1551 aa17.35■□□□□ 0.37
TUBB3-207ENST00000554927 GPSM2P81274 684 aa17.34■□□□□ 0.37
TUBB3-207ENST00000554927 TCIRG1Q13488 830 aa17.34■□□□□ 0.37
TUBB3-207ENST00000554927 RASAL3Q86YV0 1011 aa17.34■□□□□ 0.37
TUBB3-207ENST00000554927 PNNQ9H307 717 aaKnown RBP17.34■□□□□ 0.37
TUBB3-207ENST00000554927 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
TUBB3-207ENST00000554927 ASTN2O75129 1339 aaPredicted RBP17.33■□□□□ 0.36
TUBB3-207ENST00000554927 PKN2Q16513 984 aaKnown RBP17.33■□□□□ 0.36
TUBB3-207ENST00000554927 CELF1Q92879 486 aaKnown RBP17.33■□□□□ 0.36
TUBB3-207ENST00000554927 POLLQ9UGP5 575 aa17.33■□□□□ 0.36
TUBB3-207ENST00000554927 LAMB2P55268 1798 aa17.33■□□□□ 0.36
TUBB3-207ENST00000554927 RTL9Q8NET4 1388 aa17.32■□□□□ 0.36
TUBB3-207ENST00000554927 ANGEL2Q5VTE6 544 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms