RNA–Protein interactions for RNA: ENST00000554660.1

VPS33B-204, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 3

Gene VPS33B, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-204ENST00000554660 ZNRF3Q9ULT6 936 aa14.89□□□□□ -0.03
VPS33B-204ENST00000554660 DUOX1Q9NRD9 1551 aa14.89□□□□□ -0.03
VPS33B-204ENST00000554660 PROSER3Q2NL68 480 aa14.88□□□□□ -0.03
VPS33B-204ENST00000554660 LRP10Q7Z4F1 713 aa14.88□□□□□ -0.03
VPS33B-204ENST00000554660 UTP14AQ9BVJ6 771 aaKnown RBP14.88□□□□□ -0.03
VPS33B-204ENST00000554660 MRS2Q9HD23 443 aa14.88□□□□□ -0.03
VPS33B-204ENST00000554660 ERBB4Q15303 1308 aa14.88□□□□□ -0.03
VPS33B-204ENST00000554660 SHTN1A0MZ66 631 aa14.87□□□□□ -0.03
VPS33B-204ENST00000554660 RAD17O75943 681 aa14.87□□□□□ -0.03
VPS33B-204ENST00000554660 PDIA6Q15084 440 aa14.87□□□□□ -0.03
VPS33B-204ENST00000554660 DPP8Q6V1X1 898 aaPredicted RBP14.87□□□□□ -0.03
VPS33B-204ENST00000554660 TRPM4Q8TD43 1214 aa14.87□□□□□ -0.03
VPS33B-204ENST00000554660 TSPYL4Q9UJ04 414 aa14.87□□□□□ -0.03
VPS33B-204ENST00000554660 HCLS1P14317 486 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-204ENST00000554660 EIF2S2P20042 333 aaKnown RBP14.86□□□□□ -0.03
VPS33B-204ENST00000554660 MAP2K2P36507 400 aa14.86□□□□□ -0.03
VPS33B-204ENST00000554660 HIRAP54198 1017 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-204ENST00000554660 MLLT1Q03111 559 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-204ENST00000554660 CIAPIN1Q6FI81 312 aa14.86□□□□□ -0.03
VPS33B-204ENST00000554660 SUPT20HQ8NEM7 779 aa14.86□□□□□ -0.03
VPS33B-204ENST00000554660 ZNF428Q96B54 188 aa14.86□□□□□ -0.03
VPS33B-204ENST00000554660 CFAP44Q96MT7 982 aa14.86□□□□□ -0.03
VPS33B-204ENST00000554660 BCL2L13Q9BXK5 485 aa14.86□□□□□ -0.03
VPS33B-204ENST00000554660 RTFDC1Q9BY42 306 aaPredicted RBP14.86□□□□□ -0.03
VPS33B-204ENST00000554660 VPS33BQ9H267 617 aa14.86□□□□□ -0.03
VPS33B-204ENST00000554660 MAPK8IP3Q9UPT6 1336 aa14.86□□□□□ -0.03
VPS33B-204ENST00000554660 LRRC37AA6NMS7 1700 aa14.86□□□□□ -0.03
VPS33B-204ENST00000554660 KIAA2012Q0VF49 1180 aa14.85□□□□□ -0.03
VPS33B-204ENST00000554660 SLC10A5Q5PT55 438 aa14.85□□□□□ -0.03
VPS33B-204ENST00000554660 MPNDQ8N594 471 aa14.85□□□□□ -0.03
VPS33B-204ENST00000554660 MCOLN1Q9GZU1 580 aa14.85□□□□□ -0.03
VPS33B-204ENST00000554660 CDHR2Q9BYE9 1310 aa14.85□□□□□ -0.03
VPS33B-204ENST00000554660 TAF1P21675 1872 aa14.84□□□□□ -0.03
VPS33B-204ENST00000554660 YDJCA8MPS7 323 aa14.84□□□□□ -0.03
VPS33B-204ENST00000554660 BRPF1P55201 1214 aaPredicted RBP14.84□□□□□ -0.03
VPS33B-204ENST00000554660 DLK2Q6UY11 383 aa14.84□□□□□ -0.03
VPS33B-204ENST00000554660 NECTIN2Q92692 538 aa14.84□□□□□ -0.03
VPS33B-204ENST00000554660 PPP4R2Q9NY27 417 aa14.84□□□□□ -0.03
VPS33B-204ENST00000554660 CA12O43570 354 aa14.83□□□□□ -0.04
VPS33B-204ENST00000554660 AIMP1Q12904 312 aaKnown RBP14.83□□□□□ -0.04
VPS33B-204ENST00000554660 NLRP10Q86W26 655 aa14.83□□□□□ -0.04
VPS33B-204ENST00000554660 SP8Q8IXZ3 490 aa14.83□□□□□ -0.04
VPS33B-204ENST00000554660 HHIPL1Q96JK4 782 aa14.83□□□□□ -0.04
VPS33B-204ENST00000554660 ZIC5Q96T25 663 aa14.83□□□□□ -0.04
VPS33B-204ENST00000554660 PGAP2Q9UHJ9 254 aa14.83□□□□□ -0.04
VPS33B-204ENST00000554660 COL4A1P02462 1669 aa14.83□□□□□ -0.04
VPS33B-204ENST00000554660 BBOX1O75936 387 aa14.82□□□□□ -0.04
VPS33B-204ENST00000554660 RGS19P49795 217 aa14.82□□□□□ -0.04
VPS33B-204ENST00000554660 GRAPQ13588 217 aa14.82□□□□□ -0.04
VPS33B-204ENST00000554660 TNIP1Q15025 636 aa14.82□□□□□ -0.04
VPS33B-204ENST00000554660 DDX46Q7L014 1031 aaKnown RBP14.82□□□□□ -0.04
VPS33B-204ENST00000554660 CDC37L1Q7L3B6 337 aa14.82□□□□□ -0.04
VPS33B-204ENST00000554660 MICALL2Q8IY33 904 aa14.82□□□□□ -0.04
VPS33B-204ENST00000554660 GRAPLQ8TC17 118 aaPredicted RBP14.82□□□□□ -0.04
VPS33B-204ENST00000554660 XAGE3Q8WTP9 111 aa14.82□□□□□ -0.04
VPS33B-204ENST00000554660 CNOT7Q9UIV1 285 aaKnown RBP14.82□□□□□ -0.04
VPS33B-204ENST00000554660 ZBTB12Q9Y330 459 aaPredicted RBP14.82□□□□□ -0.04
VPS33B-204ENST00000554660 DDX60Q8IY21 1712 aaKnown RBP14.82□□□□□ -0.04
VPS33B-204ENST00000554660 DGKZQ13574 1117 aa14.81□□□□□ -0.04
VPS33B-204ENST00000554660 RALBP1Q15311 655 aa14.81□□□□□ -0.04
VPS33B-204ENST00000554660 COPS6Q7L5N1 327 aa14.81□□□□□ -0.04
VPS33B-204ENST00000554660 USP48Q86UV5 1035 aa14.81□□□□□ -0.04
VPS33B-204ENST00000554660 ZC3H15Q8WU90 426 aaKnown RBP14.81□□□□□ -0.04
VPS33B-204ENST00000554660 TRMT112Q9UI30 125 aaKnown RBP14.81□□□□□ -0.04
VPS33B-204ENST00000554660 CASP8AP2Q9UKL3 1982 aa14.81□□□□□ -0.04
VPS33B-204ENST00000554660 SH3TC1Q8TE82 1336 aa14.81□□□□□ -0.04
VPS33B-204ENST00000554660 EGFRP00533 1210 aa14.8□□□□□ -0.04
VPS33B-204ENST00000554660 HUNKP57058 714 aa14.8□□□□□ -0.04
VPS33B-204ENST00000554660 KRT24Q2M2I5 525 aa14.8□□□□□ -0.04
VPS33B-204ENST00000554660 HSP90AB3PQ58FF7 597 aa14.8□□□□□ -0.04
VPS33B-204ENST00000554660 SAMD7Q7Z3H4 446 aa14.8□□□□□ -0.04
VPS33B-204ENST00000554660 DBNDD1Q9H9R9 158 aa14.8□□□□□ -0.04
VPS33B-204ENST00000554660 H7C1D1 291 aa14.79□□□□□ -0.04
VPS33B-204ENST00000554660 NOGQ13253 232 aa14.79□□□□□ -0.04
VPS33B-204ENST00000554660 TBC1D10BQ4KMP7 808 aaPredicted RBP14.79□□□□□ -0.04
VPS33B-204ENST00000554660 CCDC184Q52MB2 194 aa14.79□□□□□ -0.04
VPS33B-204ENST00000554660 TNRC18O15417 2968 aaPredicted RBP14.78□□□□□ -0.04
VPS33B-204ENST00000554660 ADM5C9JUS6 153 aa14.78□□□□□ -0.04
VPS33B-204ENST00000554660 PSMD14O00487 310 aa14.78□□□□□ -0.04
VPS33B-204ENST00000554660 RIPK4P57078 832 aa14.78□□□□□ -0.04
VPS33B-204ENST00000554660 TCIRG1Q13488 830 aa14.78□□□□□ -0.04
VPS33B-204ENST00000554660 FANCIQ9NVI1 1328 aa14.77□□□□□ -0.04
VPS33B-204ENST00000554660 RIMBP2O15034 1052 aa14.77□□□□□ -0.05
VPS33B-204ENST00000554660 KRT26Q7Z3Y9 468 aa14.77□□□□□ -0.05
VPS33B-204ENST00000554660 CELF1Q92879 486 aaKnown RBP14.77□□□□□ -0.05
VPS33B-204ENST00000554660 ANP32EQ9BTT0 268 aa14.77□□□□□ -0.05
VPS33B-204ENST00000554660 PNNQ9H307 717 aaKnown RBP14.77□□□□□ -0.05
VPS33B-204ENST00000554660 RTL9Q8NET4 1388 aa14.76□□□□□ -0.05
VPS33B-204ENST00000554660 MYBBP1AQ9BQG0 1328 aaKnown RBP14.76□□□□□ -0.05
VPS33B-204ENST00000554660 FAM155AB1AL88 458 aaPredicted RBP14.76□□□□□ -0.05
VPS33B-204ENST00000554660 WASHC4Q2M389 1173 aa14.76□□□□□ -0.05
VPS33B-204ENST00000554660 CHPF2Q9P2E5 772 aa14.76□□□□□ -0.05
VPS33B-204ENST00000554660 NSFL1CQ9UNZ2 370 aaKnown RBP14.76□□□□□ -0.05
VPS33B-204ENST00000554660 RBM19Q9Y4C8 960 aaKnown RBP14.76□□□□□ -0.05
VPS33B-204ENST00000554660 C6orf229H3BNL8 230 aa14.75□□□□□ -0.05
VPS33B-204ENST00000554660 ECE2O60344 883 aa14.75□□□□□ -0.05
VPS33B-204ENST00000554660 GPSM2P81274 684 aa14.75□□□□□ -0.05
VPS33B-204ENST00000554660 DOK7Q18PE1 504 aa14.75□□□□□ -0.05
VPS33B-204ENST00000554660 RTL5Q5HYW3 569 aaPredicted RBP14.75□□□□□ -0.05
VPS33B-204ENST00000554660 RBM26Q5T8P6 1007 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms