RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 RNF225M0QZC1 329 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-226ENST00000554350 KCNQ2O43526 872 aa8.91□□□□□ -0.98
ATXN3-226ENST00000554350 GNRH1P01148 92 aa8.91□□□□□ -0.98
ATXN3-226ENST00000554350 XPCQ01831 940 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-226ENST00000554350 CNKSR1Q969H4 720 aa8.91□□□□□ -0.98
ATXN3-226ENST00000554350 GTPBP3Q969Y2 492 aaKnown RBP8.91□□□□□ -0.98
ATXN3-226ENST00000554350 GAS2L1Q99501 681 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-226ENST00000554350 ESYT1Q9BSJ8 1104 aa8.91□□□□□ -0.98
ATXN3-226ENST00000554350 FHDC1Q9C0D6 1143 aaPredicted RBP8.91□□□□□ -0.98
ATXN3-226ENST00000554350 RRP7BPQ9NSQ0 103 aa8.91□□□□□ -0.98
ATXN3-226ENST00000554350 GCC2Q8IWJ2 1684 aa8.91□□□□□ -0.98
ATXN3-226ENST00000554350 KIF15Q9NS87 1388 aa8.9□□□□□ -0.98
ATXN3-226ENST00000554350 APBB1O00213 710 aa8.9□□□□□ -0.98
ATXN3-226ENST00000554350 WASLO00401 505 aaPredicted RBP8.9□□□□□ -0.98
ATXN3-226ENST00000554350 CENPCQ03188 943 aa8.9□□□□□ -0.98
ATXN3-226ENST00000554350 NBPF8Q3BBV2 869 aa8.9□□□□□ -0.98
ATXN3-226ENST00000554350 NOS1P29475 1434 aa8.89□□□□□ -0.99
ATXN3-226ENST00000554350 IRS1P35568 1242 aa8.89□□□□□ -0.99
ATXN3-226ENST00000554350 VPS72Q15906 364 aa8.89□□□□□ -0.99
ATXN3-226ENST00000554350 TAS1R3Q7RTX0 852 aa8.89□□□□□ -0.99
ATXN3-226ENST00000554350 XAGE2Q96GT9 111 aa8.89□□□□□ -0.99
ATXN3-226ENST00000554350 TIMMDC1Q9NPL8 285 aa8.89□□□□□ -0.99
ATXN3-226ENST00000554350 CHIC2Q9UKJ5 165 aa8.89□□□□□ -0.99
ATXN3-226ENST00000554350 LOC100996750A0A140TA64 210 aa8.88□□□□□ -0.99
ATXN3-226ENST00000554350 STAU1O95793 577 aaKnown RBP8.88□□□□□ -0.99
ATXN3-226ENST00000554350 APBA3O96018 575 aa8.88□□□□□ -0.99
ATXN3-226ENST00000554350 ACDQ96AP0 544 aa8.88□□□□□ -0.99
ATXN3-226ENST00000554350 KRTAP4-6Q9BYQ5 205 aa8.88□□□□□ -0.99
ATXN3-226ENST00000554350 SLIT2O94813 1529 aa8.88□□□□□ -0.99
ATXN3-226ENST00000554350 ERBINQ96RT1 1412 aa8.88□□□□□ -0.99
ATXN3-226ENST00000554350 NPHP3Q7Z494 1330 aa8.87□□□□□ -0.99
ATXN3-226ENST00000554350 H7C1W4 665 aa8.87□□□□□ -0.99
ATXN3-226ENST00000554350 TRIM37O94972 964 aa8.87□□□□□ -0.99
ATXN3-226ENST00000554350 F11P03951 625 aa8.87□□□□□ -0.99
ATXN3-226ENST00000554350 UBAP2LQ14157 1087 aaKnown RBP8.87□□□□□ -0.99
ATXN3-226ENST00000554350 CAMKK2Q96RR4 588 aa8.87□□□□□ -0.99
ATXN3-226ENST00000554350 NALCNQ8IZF0 1738 aa8.87□□□□□ -0.99
ATXN3-226ENST00000554350 LAMC1P11047 1609 aa8.87□□□□□ -0.99
ATXN3-226ENST00000554350 ADGRB2O60241 1585 aa8.86□□□□□ -0.99
ATXN3-226ENST00000554350 XRN1Q8IZH2 1706 aaKnown RBP8.86□□□□□ -0.99
ATXN3-226ENST00000554350 ESCO1Q5FWF5 840 aa8.86□□□□□ -0.99
ATXN3-226ENST00000554350 NUCKS1Q9H1E3 243 aaKnown RBP8.86□□□□□ -0.99
ATXN3-226ENST00000554350 TMEM131LA2VDJ0 1609 aa8.86□□□□□ -0.99
ATXN3-226ENST00000554350 DISP2A7MBM2 1401 aa8.86□□□□□ -0.99
ATXN3-226ENST00000554350 FOXO3O43524 673 aa8.85□□□□□ -0.99
ATXN3-226ENST00000554350 MYCP01106 439 aaPredicted RBP8.85□□□□□ -0.99
ATXN3-226ENST00000554350 MARSP56192 900 aaKnown RBP8.85□□□□□ -0.99
ATXN3-226ENST00000554350 FOXR1Q6PIV2 292 aa8.85□□□□□ -0.99
ATXN3-226ENST00000554350 ETNK1Q9HBU6 452 aa8.85□□□□□ -0.99
ATXN3-226ENST00000554350 CHD4Q14839 1912 aa8.85□□□□□ -0.99
ATXN3-226ENST00000554350 LMTK2Q8IWU2 1503 aa8.85□□□□□ -0.99
ATXN3-226ENST00000554350 CEP350Q5VT06 3117 aa8.85□□□□□ -0.99
ATXN3-226ENST00000554350 PHKA2P46019 1235 aa8.84□□□□□ -0.99
ATXN3-226ENST00000554350 MAP3K10Q02779 954 aa8.84□□□□□ -0.99
ATXN3-226ENST00000554350 SUZ12Q15022 739 aaKnown RBP8.84□□□□□ -0.99
ATXN3-226ENST00000554350 C4orf17Q53FE4 359 aa8.84□□□□□ -0.99
ATXN3-226ENST00000554350 ZSCAN10Q96SZ4 725 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-226ENST00000554350 TNS1Q9HBL0 1735 aaKnown RBP8.84□□□□□ -0.99
ATXN3-226ENST00000554350 DNMT3AQ9Y6K1 912 aaPredicted RBP8.84□□□□□ -0.99
ATXN3-226ENST00000554350 BCRP11274 1271 aa8.83□□□□□ -1
ATXN3-226ENST00000554350 EIF4G2P78344 907 aaKnown RBP eCLIP8.83□□□□□ -1
ATXN3-226ENST00000554350 VAC14Q08AM6 782 aa8.83□□□□□ -1
ATXN3-226ENST00000554350 KANK3Q6NY19 840 aa8.83□□□□□ -1
ATXN3-226ENST00000554350 SCARF2Q96GP6 870 aaPredicted RBP8.83□□□□□ -1
ATXN3-226ENST00000554350 GDPD2Q9HCC8 539 aa8.83□□□□□ -1
ATXN3-226ENST00000554350 GPAMQ9HCL2 828 aa8.83□□□□□ -1
ATXN3-226ENST00000554350 DOLKQ9UPQ8 538 aa8.83□□□□□ -1
ATXN3-226ENST00000554350 METP08581 1390 aa8.83□□□□□ -1
ATXN3-226ENST00000554350 PARD3Q8TEW0 1356 aa8.83□□□□□ -1
ATXN3-226ENST00000554350 MX2P20592 715 aa8.82□□□□□ -1
ATXN3-226ENST00000554350 TRERF1Q96PN7 1200 aa8.82□□□□□ -1
ATXN3-226ENST00000554350 USP32Q8NFA0 1604 aa8.82□□□□□ -1
ATXN3-226ENST00000554350 PXDNQ92626 1479 aa8.82□□□□□ -1
ATXN3-226ENST00000554350 NRKQ7Z2Y5 1582 aa8.82□□□□□ -1
ATXN3-226ENST00000554350 PLCH1Q4KWH8 1693 aa8.81□□□□□ -1
ATXN3-226ENST00000554350 CNTNAP5Q8WYK1 1306 aa8.81□□□□□ -1
ATXN3-226ENST00000554350 PTPN23Q9H3S7 1636 aa8.81□□□□□ -1
ATXN3-226ENST00000554350 A0A1B0GTH6 734 aa8.81□□□□□ -1
ATXN3-226ENST00000554350 SCNN1DP51172 638 aa8.81□□□□□ -1
ATXN3-226ENST00000554350 RNF135Q8IUD6 432 aa8.81□□□□□ -1
ATXN3-226ENST00000554350 CFHR5Q9BXR6 569 aa8.81□□□□□ -1
ATXN3-226ENST00000554350 LRPPRCP42704 1394 aaKnown RBP8.81□□□□□ -1
ATXN3-226ENST00000554350 ADGRL2O95490 1459 aa8.81□□□□□ -1
ATXN3-226ENST00000554350 NUP188Q5SRE5 1749 aa8.8□□□□□ -1
ATXN3-226ENST00000554350 FAM83GA6ND36 823 aa8.8□□□□□ -1
ATXN3-226ENST00000554350 ZBTB7AO95365 584 aa8.8□□□□□ -1
ATXN3-226ENST00000554350 USP4Q13107 963 aa8.8□□□□□ -1
ATXN3-226ENST00000554350 GPR162Q16538 588 aa8.8□□□□□ -1
ATXN3-226ENST00000554350 SLFNL1Q499Z3 407 aa8.8□□□□□ -1
ATXN3-226ENST00000554350 FAM196AQ6ZSG2 479 aa8.8□□□□□ -1
ATXN3-226ENST00000554350 PPARGC1BQ86YN6 1023 aaKnown RBP8.8□□□□□ -1
ATXN3-226ENST00000554350 ITGB2P05107 769 aa8.79□□□□□ -1
ATXN3-226ENST00000554350 MSX1P28360 303 aa8.79□□□□□ -1
ATXN3-226ENST00000554350 OXLD1Q5BKU9 147 aa8.79□□□□□ -1
ATXN3-226ENST00000554350 ZNF326Q5BKZ1 582 aaKnown RBP8.79□□□□□ -1
ATXN3-226ENST00000554350 C1orf229Q6ZS94 237 aaPredicted RBP8.79□□□□□ -1
ATXN3-226ENST00000554350 SYT17Q9BSW7 474 aa8.79□□□□□ -1
ATXN3-226ENST00000554350 RUBCNLQ9H714 662 aa8.79□□□□□ -1
ATXN3-226ENST00000554350 ENAMQ9NRM1 1142 aa8.79□□□□□ -1
ATXN3-226ENST00000554350 LRRC4BQ9NT99 713 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms