RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 NGEFQ8N5V2 710 aa18.38■□□□□ 0.53
NEDD1-206ENST00000554226 ZIC5Q96T25 663 aa18.38■□□□□ 0.53
NEDD1-206ENST00000554226 RRP7AQ9Y3A4 280 aaKnown RBP18.38■□□□□ 0.53
NEDD1-206ENST00000554226 ABCC4O15439 1325 aa18.38■□□□□ 0.53
NEDD1-206ENST00000554226 BBOX1O75936 387 aa18.37■□□□□ 0.53
NEDD1-206ENST00000554226 HIRAP54198 1017 aaPredicted RBP18.37■□□□□ 0.53
NEDD1-206ENST00000554226 SP8Q8IXZ3 490 aa18.37■□□□□ 0.53
NEDD1-206ENST00000554226 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
NEDD1-206ENST00000554226 ZNF408Q9H9D4 720 aa18.37■□□□□ 0.53
NEDD1-206ENST00000554226 TNIP1Q15025 636 aa18.36■□□□□ 0.53
NEDD1-206ENST00000554226 PIAS4Q8N2W9 510 aaPredicted RBP18.36■□□□□ 0.53
NEDD1-206ENST00000554226 TRPM4Q8TD43 1214 aa18.36■□□□□ 0.53
NEDD1-206ENST00000554226 MYL6BP14649 208 aa18.35■□□□□ 0.53
NEDD1-206ENST00000554226 CNGB1Q14028 1251 aaPredicted RBP18.35■□□□□ 0.53
NEDD1-206ENST00000554226 DPP8Q6V1X1 898 aaPredicted RBP18.35■□□□□ 0.53
NEDD1-206ENST00000554226 UTP14AQ9BVJ6 771 aaKnown RBP18.35■□□□□ 0.53
NEDD1-206ENST00000554226 SAGE1Q9NXZ1 904 aa18.34■□□□□ 0.53
NEDD1-206ENST00000554226 DDX60Q8IY21 1712 aaKnown RBP18.34■□□□□ 0.53
NEDD1-206ENST00000554226 SOX10P56693 466 aa18.33■□□□□ 0.52
NEDD1-206ENST00000554226 HUNKP57058 714 aa18.33■□□□□ 0.52
NEDD1-206ENST00000554226 PDIA6Q15084 440 aa18.33■□□□□ 0.52
NEDD1-206ENST00000554226 TMC4Q7Z404 712 aa18.33■□□□□ 0.52
NEDD1-206ENST00000554226 MPNDQ8N594 471 aa18.33■□□□□ 0.52
NEDD1-206ENST00000554226 DPF2Q92785 391 aa18.33■□□□□ 0.52
NEDD1-206ENST00000554226 PLEKHF1Q96S99 279 aa18.33■□□□□ 0.52
NEDD1-206ENST00000554226 POLR2AP24928 1970 aaKnown RBP18.32■□□□□ 0.52
NEDD1-206ENST00000554226 AKAP11Q9UKA4 1901 aa18.32■□□□□ 0.52
NEDD1-206ENST00000554226 FAM155AB1AL88 458 aaPredicted RBP18.32■□□□□ 0.52
NEDD1-206ENST00000554226 BCL2L13Q9BXK5 485 aa18.32■□□□□ 0.52
NEDD1-206ENST00000554226 CNOT7Q9UIV1 285 aaKnown RBP18.32■□□□□ 0.52
NEDD1-206ENST00000554226 TAF1P21675 1872 aa18.32■□□□□ 0.52
NEDD1-206ENST00000554226 YDJCA8MPS7 323 aa18.31■□□□□ 0.52
NEDD1-206ENST00000554226 RAD17O75943 681 aa18.31■□□□□ 0.52
NEDD1-206ENST00000554226 NEFMP07197 916 aa18.31■□□□□ 0.52
NEDD1-206ENST00000554226 PRPF38BQ5VTL8 546 aaKnown RBP18.31■□□□□ 0.52
NEDD1-206ENST00000554226 SHTN1A0MZ66 631 aa18.3■□□□□ 0.52
NEDD1-206ENST00000554226 H7C1D1 291 aa18.3■□□□□ 0.52
NEDD1-206ENST00000554226 GRAPQ13588 217 aa18.3■□□□□ 0.52
NEDD1-206ENST00000554226 NFE2L2Q16236 605 aa18.3■□□□□ 0.52
NEDD1-206ENST00000554226 HSP90AB3PQ58FF7 597 aa18.3■□□□□ 0.52
NEDD1-206ENST00000554226 RGMBQ6NW40 437 aa18.3■□□□□ 0.52
NEDD1-206ENST00000554226 USP48Q86UV5 1035 aa18.3■□□□□ 0.52
NEDD1-206ENST00000554226 GRAPLQ8TC17 118 aaPredicted RBP18.3■□□□□ 0.52
NEDD1-206ENST00000554226 DLK2Q6UY11 383 aa18.29■□□□□ 0.52
NEDD1-206ENST00000554226 NLRP10Q86W26 655 aa18.29■□□□□ 0.52
NEDD1-206ENST00000554226 MICALL2Q8IY33 904 aa18.29■□□□□ 0.52
NEDD1-206ENST00000554226 DDX46Q7L014 1031 aaKnown RBP18.28■□□□□ 0.52
NEDD1-206ENST00000554226 CCDC102AQ96A19 550 aa18.28■□□□□ 0.52
NEDD1-206ENST00000554226 GBA2Q9HCG7 927 aaPredicted RBP18.28■□□□□ 0.52
NEDD1-206ENST00000554226 BABAM1Q9NWV8 329 aa18.28■□□□□ 0.52
NEDD1-206ENST00000554226 SH3TC1Q8TE82 1336 aa18.27■□□□□ 0.52
NEDD1-206ENST00000554226 RPS12P25398 132 aaKnown RBP18.27■□□□□ 0.52
NEDD1-206ENST00000554226 KIF23Q02241 960 aaPredicted RBP18.27■□□□□ 0.52
NEDD1-206ENST00000554226 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.52
NEDD1-206ENST00000554226 RNF186Q9NXI6 227 aa18.27■□□□□ 0.52
NEDD1-206ENST00000554226 ZNF609O15014 1411 aa18.26■□□□□ 0.51
NEDD1-206ENST00000554226 PROSER3Q2NL68 480 aa18.26■□□□□ 0.51
NEDD1-206ENST00000554226 TRPA1O75762 1119 aa18.25■□□□□ 0.51
NEDD1-206ENST00000554226 HCLS1P14317 486 aaPredicted RBP18.25■□□□□ 0.51
NEDD1-206ENST00000554226 TCIRG1Q13488 830 aa18.25■□□□□ 0.51
NEDD1-206ENST00000554226 KRT26Q7Z3Y9 468 aa18.25■□□□□ 0.51
NEDD1-206ENST00000554226 C2orf69Q8N8R5 385 aa18.25■□□□□ 0.51
NEDD1-206ENST00000554226 ZBTB12Q9Y330 459 aaPredicted RBP18.25■□□□□ 0.51
NEDD1-206ENST00000554226 PSME4Q14997 1843 aa18.24■□□□□ 0.51
NEDD1-206ENST00000554226 PSMD14O00487 310 aa18.24■□□□□ 0.51
NEDD1-206ENST00000554226 SAMD7Q7Z3H4 446 aa18.24■□□□□ 0.51
NEDD1-206ENST00000554226 CTU1Q7Z7A3 348 aaKnown RBP18.24■□□□□ 0.51
NEDD1-206ENST00000554226 PNNQ9H307 717 aaKnown RBP18.24■□□□□ 0.51
NEDD1-206ENST00000554226 TSPYL4Q9UJ04 414 aa18.24■□□□□ 0.51
NEDD1-206ENST00000554226 SCN9AQ15858 1988 aa18.24■□□□□ 0.51
NEDD1-206ENST00000554226 EGFRP00533 1210 aa18.23■□□□□ 0.51
NEDD1-206ENST00000554226 SLC10A3P09131 477 aa18.23■□□□□ 0.51
NEDD1-206ENST00000554226 ZNF157P51786 506 aaPredicted RBP18.23■□□□□ 0.51
NEDD1-206ENST00000554226 WASHC4Q2M389 1173 aa18.23■□□□□ 0.51
NEDD1-206ENST00000554226 REM2Q8IYK8 340 aaPredicted RBP18.23■□□□□ 0.51
NEDD1-206ENST00000554226 TRMT112Q9UI30 125 aaKnown RBP18.23■□□□□ 0.51
NEDD1-206ENST00000554226 RTL9Q8NET4 1388 aa18.22■□□□□ 0.51
NEDD1-206ENST00000554226 ADM5C9JUS6 153 aa18.22■□□□□ 0.51
NEDD1-206ENST00000554226 SF3B3Q15393 1217 aaKnown RBP18.22■□□□□ 0.51
NEDD1-206ENST00000554226 TBC1D10BQ4KMP7 808 aaPredicted RBP18.22■□□□□ 0.51
NEDD1-206ENST00000554226 COPS6Q7L5N1 327 aa18.22■□□□□ 0.51
NEDD1-206ENST00000554226 DCPSQ96C86 337 aaKnown RBP18.22■□□□□ 0.51
NEDD1-206ENST00000554226 CSRNP1Q96S65 589 aa18.22■□□□□ 0.51
NEDD1-206ENST00000554226 COL4A1P02462 1669 aa18.21■□□□□ 0.51
NEDD1-206ENST00000554226 MAPK8IP3Q9UPT6 1336 aa18.21■□□□□ 0.51
NEDD1-206ENST00000554226 PAPPA2Q9BXP8 1791 aa18.2■□□□□ 0.5
NEDD1-206ENST00000554226 ANXA1P04083 346 aa18.2■□□□□ 0.5
NEDD1-206ENST00000554226 EIF2S2P20042 333 aaKnown RBP18.2■□□□□ 0.5
NEDD1-206ENST00000554226 XAGE3Q8WTP9 111 aa18.2■□□□□ 0.5
NEDD1-206ENST00000554226 HPS5Q9UPZ3 1129 aa18.2■□□□□ 0.5
NEDD1-206ENST00000554226 DBNDD1Q9H9R9 158 aa18.19■□□□□ 0.5
NEDD1-206ENST00000554226 POLLQ9UGP5 575 aa18.19■□□□□ 0.5
NEDD1-206ENST00000554226 NSFL1CQ9UNZ2 370 aaKnown RBP18.19■□□□□ 0.5
NEDD1-206ENST00000554226 ECE2O60344 883 aa18.18■□□□□ 0.5
NEDD1-206ENST00000554226 VIL1P09327 827 aaKnown RBP18.18■□□□□ 0.5
NEDD1-206ENST00000554226 FKBP1BP68106 108 aa18.18■□□□□ 0.5
NEDD1-206ENST00000554226 KIF4BQ2VIQ3 1234 aa18.18■□□□□ 0.5
NEDD1-206ENST00000554226 CELF1Q92879 486 aaKnown RBP18.18■□□□□ 0.5
NEDD1-206ENST00000554226 EYA3Q99504 573 aa18.18■□□□□ 0.5
NEDD1-206ENST00000554226 ZNF280AP59817 542 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms