RNA–Protein interactions for RNA: ENST00000553871.5

EFCAB11-204, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 5

Gene EFCAB11, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-204ENST00000553871 XPCQ01831 940 aaPredicted RBP6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 ENOX2Q16206 610 aaKnown RBP6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 ALG1LQ6GMV1 187 aa6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 VWA5B2Q8N398 1253 aa6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 FOXD3Q9UJU5 478 aaPredicted RBP6.04□□□□□ -1.44
EFCAB11-204ENST00000553871 PHF20L1A8MW92 1017 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 POTECB2RU33 542 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 EGFRP00533 1210 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 NFKB1P19838 968 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 GRNP28799 593 aaKnown RBP6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 UBAP2LQ14157 1087 aaKnown RBP6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 XKR5Q6UX68 686 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 BHMTQ93088 406 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 CFHR5Q9BXR6 569 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 DNAJC25Q9H1X3 360 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 MRS2Q9HD23 443 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 STRN4Q9NRL3 753 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 TMEM63CQ9P1W3 806 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 PRR12Q9ULL5 1215 aa6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.03□□□□□ -1.44
EFCAB11-204ENST00000553871 PSAPP07602 524 aa6.02□□□□□ -1.45
EFCAB11-204ENST00000553871 CES1P23141 567 aa6.02□□□□□ -1.45
EFCAB11-204ENST00000553871 RAB44Q7Z6P3 723 aaPredicted RBP6.02□□□□□ -1.45
EFCAB11-204ENST00000553871 MRRFQ96E11 262 aaKnown RBP6.02□□□□□ -1.45
EFCAB11-204ENST00000553871 GSX2Q9BZM3 304 aa6.02□□□□□ -1.45
EFCAB11-204ENST00000553871 EFCC1Q9HA90 598 aa6.02□□□□□ -1.45
EFCAB11-204ENST00000553871 NDFIP2Q9NV92 336 aa6.02□□□□□ -1.45
EFCAB11-204ENST00000553871 BMP4P12644 408 aa6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 TARSP26639 723 aaKnown RBP6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 VEGFBP49765 207 aa6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 TAGLNQ01995 201 aaKnown RBP6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 PSMD2Q13200 908 aa6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 FBF1Q8TES7 1133 aa6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 PMEPA1Q969W9 287 aa6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 DUSP9Q99956 384 aaKnown RBP6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 NLRP2Q9NX02 1062 aa6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 NXF1Q9UBU9 619 aaKnown RBP6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 WWC3Q9ULE0 1092 aa6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 NSFL1CQ9UNZ2 370 aaKnown RBP6.01□□□□□ -1.45
EFCAB11-204ENST00000553871 MX2P20592 715 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 TBC1D8BQ0IIM8 1120 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 GRIN2CQ14957 1233 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 FAM182BQ5T319 152 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 C1orf127Q8N9H9 656 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 NANOS1Q8WY41 292 aaKnown RBP6□□□□□ -1.45
EFCAB11-204ENST00000553871 SETDB2Q96T68 719 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 SLC30A3Q99726 388 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 ZFYVE28Q9HCC9 887 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 KANSL3Q9P2N6 904 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 PARP2Q9UGN5 583 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 SPG7Q9UQ90 795 aa6□□□□□ -1.45
EFCAB11-204ENST00000553871 UNCXA6NJT0 531 aa5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 EREGO14944 169 aa5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 MMP20O60882 483 aa5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 GADD45BO75293 160 aaPredicted RBP5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 POLR3DP05423 398 aaPredicted RBP5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 PLAURQ03405 335 aa5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 USPL1Q5W0Q7 1092 aa5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 ZNF787Q6DD87 383 aa5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 CCDC74AQ96AQ1 378 aa5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 IGFLR1Q9H665 355 aa5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 CNTN3Q9P232 1028 aa5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 VTI1BQ9UEU0 232 aa5.99□□□□□ -1.45
EFCAB11-204ENST00000553871 MAP3K6O95382 1288 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 EDN3P14138 238 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 GNA15P30679 374 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 CTBSQ01459 385 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 HYAL2Q12891 473 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 DHX32Q7L7V1 743 aaKnown RBP5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 NCAPG2Q86XI2 1143 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 NPAS3Q8IXF0 933 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 OR13H1Q8NG92 308 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 SLC16A10Q8TF71 515 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 UBE2OQ9C0C9 1292 aaKnown RBP5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 CHRDQ9H2X0 955 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 TLR7Q9NYK1 1049 aaKnown RBP5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 ZFATQ9P243 1243 aa5.98□□□□□ -1.45
EFCAB11-204ENST00000553871 H3BM21 787 aa5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 SORBS3O60504 671 aa5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 CYP2E1P05181 493 aaPredicted RBP5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 SOX18P35713 384 aa5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 PCSK7Q16549 785 aa5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 SYT9Q86SS6 491 aa5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 SPACA7Q96KW9 195 aa5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 FAM161BQ96MY7 647 aa5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 FRMD6Q96NE9 622 aa5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 NSUN5Q96P11 429 aaKnown RBP5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 NPHS2Q9NP85 383 aa5.97□□□□□ -1.45
EFCAB11-204ENST00000553871 EIF4BP23588 611 aaKnown RBP5.96□□□□□ -1.46
EFCAB11-204ENST00000553871 IRS1P35568 1242 aa5.96□□□□□ -1.46
EFCAB11-204ENST00000553871 MAP2K3P46734 347 aa5.96□□□□□ -1.46
EFCAB11-204ENST00000553871 NRLP54845 237 aa5.96□□□□□ -1.46
EFCAB11-204ENST00000553871 PCBP4P57723 403 aaKnown RBP5.96□□□□□ -1.46
EFCAB11-204ENST00000553871 TSNAXIP1Q2TAA8 658 aa5.96□□□□□ -1.46
EFCAB11-204ENST00000553871 ZNF468Q5VIY5 522 aaPredicted RBP5.96□□□□□ -1.46
EFCAB11-204ENST00000553871 TMC4Q7Z404 712 aa5.96□□□□□ -1.46
EFCAB11-204ENST00000553871 GALNT12Q8IXK2 581 aa5.96□□□□□ -1.46
EFCAB11-204ENST00000553871 EPS8L3Q8TE67 593 aaKnown RBP5.96□□□□□ -1.46
EFCAB11-204ENST00000553871 RBSNQ9H1K0 784 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms