RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 SLC27A2O14975 620 aa12.88□□□□□ -0.35
TTC8-208ENST00000553718 A1BGP04217 495 aa12.88□□□□□ -0.35
TTC8-208ENST00000553718 CSF1RP07333 972 aa12.88□□□□□ -0.35
TTC8-208ENST00000553718 CSPP1Q1MSJ5 1256 aa12.88□□□□□ -0.35
TTC8-208ENST00000553718 PRPF40BQ6NWY9 871 aaKnown RBP12.88□□□□□ -0.35
TTC8-208ENST00000553718 ATG9AQ7Z3C6 839 aa12.88□□□□□ -0.35
TTC8-208ENST00000553718 KBTBD3Q8NAB2 608 aa12.88□□□□□ -0.35
TTC8-208ENST00000553718 DDX54Q8TDD1 881 aaKnown RBP12.88□□□□□ -0.35
TTC8-208ENST00000553718 GZF1Q9H116 711 aaPredicted RBP12.88□□□□□ -0.35
TTC8-208ENST00000553718 SIL1Q9H173 461 aa12.88□□□□□ -0.35
TTC8-208ENST00000553718 AKAP2Q9Y2D5 859 aa12.88□□□□□ -0.35
TTC8-208ENST00000553718 THRAP3Q9Y2W1 955 aaKnown RBP12.88□□□□□ -0.35
TTC8-208ENST00000553718 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
TTC8-208ENST00000553718 TAF5LO75529 589 aa12.87□□□□□ -0.35
TTC8-208ENST00000553718 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
TTC8-208ENST00000553718 PKP1Q13835 747 aa12.87□□□□□ -0.35
TTC8-208ENST00000553718 MCMDC2Q4G0Z9 681 aa12.87□□□□□ -0.35
TTC8-208ENST00000553718 KIF6Q6ZMV9 814 aa12.87□□□□□ -0.35
TTC8-208ENST00000553718 SYAP1Q96A49 352 aaPredicted RBP12.87□□□□□ -0.35
TTC8-208ENST00000553718 JAKMIP1Q96N16 626 aaKnown RBP12.87□□□□□ -0.35
TTC8-208ENST00000553718 STRN4Q9NRL3 753 aa12.87□□□□□ -0.35
TTC8-208ENST00000553718 TLR7Q9NYK1 1049 aaKnown RBP12.87□□□□□ -0.35
TTC8-208ENST00000553718 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
TTC8-208ENST00000553718 SMC3Q9UQE7 1217 aa12.87□□□□□ -0.35
TTC8-208ENST00000553718 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.87□□□□□ -0.35
TTC8-208ENST00000553718 SPEF2Q9C093 1822 aa12.87□□□□□ -0.35
TTC8-208ENST00000553718 ERVV-1B6SEH8 477 aa12.86□□□□□ -0.35
TTC8-208ENST00000553718 PRPF40AO75400 957 aaKnown RBP12.86□□□□□ -0.35
TTC8-208ENST00000553718 HMGB1P09429 215 aaKnown RBP12.86□□□□□ -0.35
TTC8-208ENST00000553718 NCLP19338 710 aaKnown RBP12.86□□□□□ -0.35
TTC8-208ENST00000553718 PDCP20941 246 aa12.86□□□□□ -0.35
TTC8-208ENST00000553718 KCNJ4P48050 445 aa12.86□□□□□ -0.35
TTC8-208ENST00000553718 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
TTC8-208ENST00000553718 GIGYF2Q6Y7W6 1299 aaKnown RBP12.86□□□□□ -0.35
TTC8-208ENST00000553718 ZBTB38Q8NAP3 1195 aaPredicted RBP12.86□□□□□ -0.35
TTC8-208ENST00000553718 PIGBQ92521 554 aa12.86□□□□□ -0.35
TTC8-208ENST00000553718 AK7Q96M32 723 aa12.86□□□□□ -0.35
TTC8-208ENST00000553718 FAM227BQ96M60 508 aa12.86□□□□□ -0.35
TTC8-208ENST00000553718 DSCC1Q9BVC3 393 aa12.86□□□□□ -0.35
TTC8-208ENST00000553718 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
TTC8-208ENST00000553718 MAP3K15Q6ZN16 1313 aa12.86□□□□□ -0.35
TTC8-208ENST00000553718 EXOC5O00471 708 aa12.85□□□□□ -0.35
TTC8-208ENST00000553718 LETM1O95202 739 aaPredicted RBP12.85□□□□□ -0.35
TTC8-208ENST00000553718 ZSCAN22P10073 491 aaPredicted RBP12.85□□□□□ -0.35
TTC8-208ENST00000553718 KLHDC4Q8TBB5 520 aa12.85□□□□□ -0.35
TTC8-208ENST00000553718 ZNF512BQ96KM6 892 aaPredicted RBP12.85□□□□□ -0.35
TTC8-208ENST00000553718 DBNDD2Q9BQY9 259 aa12.85□□□□□ -0.35
TTC8-208ENST00000553718 BTG4Q9NY30 223 aa12.85□□□□□ -0.35
TTC8-208ENST00000553718 CEP126Q9P2H0 1117 aa12.85□□□□□ -0.35
TTC8-208ENST00000553718 BCL9O00512 1426 aa12.85□□□□□ -0.35
TTC8-208ENST00000553718 TJP1Q07157 1748 aa12.85□□□□□ -0.35
TTC8-208ENST00000553718 A0A0D9SFI3 127 aa12.84□□□□□ -0.35
TTC8-208ENST00000553718 STX6O43752 255 aa12.84□□□□□ -0.35
TTC8-208ENST00000553718 ZFYP08048 801 aaPredicted RBP12.84□□□□□ -0.35
TTC8-208ENST00000553718 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
TTC8-208ENST00000553718 PIP4K2AP48426 406 aaPredicted RBP12.84□□□□□ -0.35
TTC8-208ENST00000553718 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
TTC8-208ENST00000553718 GAS2L3Q86XJ1 694 aa12.84□□□□□ -0.35
TTC8-208ENST00000553718 ANP32BQ92688 251 aaKnown RBP12.84□□□□□ -0.35
TTC8-208ENST00000553718 TOGARAM1Q9Y4F4 1720 aa12.83□□□□□ -0.36
TTC8-208ENST00000553718 PHF14O94880 888 aa12.83□□□□□ -0.36
TTC8-208ENST00000553718 IL6STP40189 918 aaPredicted RBP12.83□□□□□ -0.36
TTC8-208ENST00000553718 CCDC173Q0VFZ6 552 aa12.83□□□□□ -0.36
TTC8-208ENST00000553718 ADCK5Q3MIX3 580 aa12.83□□□□□ -0.36
TTC8-208ENST00000553718 ZSCAN23Q3MJ62 389 aa12.83□□□□□ -0.36
TTC8-208ENST00000553718 LRSAM1Q6UWE0 723 aa12.83□□□□□ -0.36
TTC8-208ENST00000553718 PPP1R9BQ96SB3 815 aa12.83□□□□□ -0.36
TTC8-208ENST00000553718 ZNF609O15014 1411 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 F13A1P00488 732 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 CYP19A1P11511 503 aaPredicted RBP12.82□□□□□ -0.36
TTC8-208ENST00000553718 SYT1P21579 422 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 HSPA1LP34931 641 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 CCDC158Q5M9N0 1113 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 ZMYM1Q5SVZ6 1142 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 DNAJC10Q8IXB1 793 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 FBXL16Q8N461 479 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 GPT2Q8TD30 523 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 NEK1Q96PY6 1258 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 ZBTB3Q9H5J0 574 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 PAG1Q9NWQ8 432 aa12.82□□□□□ -0.36
TTC8-208ENST00000553718 A0A1B0GUL7 405 aa12.81□□□□□ -0.36
TTC8-208ENST00000553718 RGL2O15211 777 aa12.81□□□□□ -0.36
TTC8-208ENST00000553718 IFIT1P09914 478 aaKnown RBP12.81□□□□□ -0.36
TTC8-208ENST00000553718 HSP90B1P14625 803 aaKnown RBP12.81□□□□□ -0.36
TTC8-208ENST00000553718 ME3Q16798 604 aa12.81□□□□□ -0.36
TTC8-208ENST00000553718 HS1BP3Q53T59 392 aa12.81□□□□□ -0.36
TTC8-208ENST00000553718 CAVIN1Q6NZI2 390 aaKnown RBP12.81□□□□□ -0.36
TTC8-208ENST00000553718 RGS22Q8NE09 1264 aa12.81□□□□□ -0.36
TTC8-208ENST00000553718 CHMP3Q9Y3E7 222 aa12.81□□□□□ -0.36
TTC8-208ENST00000553718 RNF113AO15541 343 aaKnown RBP12.8□□□□□ -0.36
TTC8-208ENST00000553718 GJB2P29033 226 aa12.8□□□□□ -0.36
TTC8-208ENST00000553718 IFIT5Q13325 482 aaKnown RBP12.8□□□□□ -0.36
TTC8-208ENST00000553718 ZNF589Q86UQ0 364 aaPredicted RBP12.8□□□□□ -0.36
TTC8-208ENST00000553718 JARID2Q92833 1246 aaPredicted RBP12.8□□□□□ -0.36
TTC8-208ENST00000553718 NEUROD6Q96NK8 337 aa12.8□□□□□ -0.36
TTC8-208ENST00000553718 LLPHQ9BRT6 129 aaKnown RBP12.8□□□□□ -0.36
TTC8-208ENST00000553718 AGXT2Q9BYV1 514 aa12.8□□□□□ -0.36
TTC8-208ENST00000553718 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
TTC8-208ENST00000553718 NASPP49321 788 aaPredicted RBP12.79□□□□□ -0.36
TTC8-208ENST00000553718 UBE2HP62256 183 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms