RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 C11orf95C9JLR9 678 aaPredicted RBP5.98□□□□□ -1.45
TDP1-207ENST00000553617 PHACTR2O75167 634 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 WFS1O76024 890 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 UPP2O95045 317 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 TNNI2P48788 182 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 VEGFBP49765 207 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 ST13P50502 369 aaKnown RBP5.98□□□□□ -1.45
TDP1-207ENST00000553617 ZNF394Q53GI3 561 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 C6orf118Q5T5N4 469 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 LRRC69Q6ZNQ3 347 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 GALNT12Q8IXK2 581 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 FAM177A1Q8N128 213 aaPredicted RBP5.98□□□□□ -1.45
TDP1-207ENST00000553617 TANGO6Q9C0B7 1094 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 SRCIN1Q9C0H9 1055 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 CRISPLD1Q9H336 500 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 NPHS2Q9NP85 383 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 C11orf16Q9NQ32 467 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 FAM8A1Q9UBU6 413 aa5.98□□□□□ -1.45
TDP1-207ENST00000553617 PPP1R1BQ9UD71 204 aaPredicted RBP5.98□□□□□ -1.45
TDP1-207ENST00000553617 A0A1W2PNR3 127 aa5.97□□□□□ -1.45
TDP1-207ENST00000553617 TAF1CQ15572 869 aaPredicted RBP5.97□□□□□ -1.45
TDP1-207ENST00000553617 MEI1Q5TIA1 1274 aa5.97□□□□□ -1.45
TDP1-207ENST00000553617 HS2ST1Q7LGA3 356 aa5.97□□□□□ -1.45
TDP1-207ENST00000553617 ZNF654Q8IZM8 581 aa5.97□□□□□ -1.45
TDP1-207ENST00000553617 ARMC5Q96C12 935 aa5.97□□□□□ -1.45
TDP1-207ENST00000553617 TIMMDC1Q9NPL8 285 aa5.97□□□□□ -1.45
TDP1-207ENST00000553617 CNTN3Q9P232 1028 aa5.97□□□□□ -1.45
TDP1-207ENST00000553617 PRKAG2Q9UGJ0 569 aa5.97□□□□□ -1.45
TDP1-207ENST00000553617 PCDHGB7Q9Y5F8 929 aa5.97□□□□□ -1.45
TDP1-207ENST00000553617 EREGO14944 169 aa5.96□□□□□ -1.46
TDP1-207ENST00000553617 USP17L7P0C7H9 530 aa5.96□□□□□ -1.46
TDP1-207ENST00000553617 BMP2P12643 396 aa5.96□□□□□ -1.46
TDP1-207ENST00000553617 EPB42P16452 691 aa5.96□□□□□ -1.46
TDP1-207ENST00000553617 ARSJQ5FYB0 599 aaPredicted RBP5.96□□□□□ -1.46
TDP1-207ENST00000553617 SAMD5Q5TGI4 173 aa5.96□□□□□ -1.46
TDP1-207ENST00000553617 MRPL14Q6P1L8 145 aaKnown RBP5.96□□□□□ -1.46
TDP1-207ENST00000553617 NXPE4Q6UWF7 544 aa5.96□□□□□ -1.46
TDP1-207ENST00000553617 ERMP1Q7Z2K6 904 aa5.96□□□□□ -1.46
TDP1-207ENST00000553617 USP48Q86UV5 1035 aa5.96□□□□□ -1.46
TDP1-207ENST00000553617 C1orf127Q8N9H9 656 aa5.96□□□□□ -1.46
TDP1-207ENST00000553617 BCO2Q9BYV7 579 aa5.96□□□□□ -1.46
TDP1-207ENST00000553617 SOS2Q07890 1332 aaPredicted RBP5.96□□□□□ -1.46
TDP1-207ENST00000553617 XYLBO75191 536 aa5.95□□□□□ -1.46
TDP1-207ENST00000553617 RHOQP17081 205 aa5.95□□□□□ -1.46
TDP1-207ENST00000553617 NFX1Q12986 1120 aaKnown RBP5.95□□□□□ -1.46
TDP1-207ENST00000553617 GNL2Q13823 731 aaKnown RBP5.95□□□□□ -1.46
TDP1-207ENST00000553617 TRIM46Q7Z4K8 759 aa5.95□□□□□ -1.46
TDP1-207ENST00000553617 NLRP13Q86W25 1043 aa5.95□□□□□ -1.46
TDP1-207ENST00000553617 GLIS3Q8NEA6 775 aa5.95□□□□□ -1.46
TDP1-207ENST00000553617 SUV39H2Q9H5I1 410 aa5.95□□□□□ -1.46
TDP1-207ENST00000553617 NEUROD4Q9HD90 331 aa5.95□□□□□ -1.46
TDP1-207ENST00000553617 CUEDC1Q9NWM3 386 aaPredicted RBP5.95□□□□□ -1.46
TDP1-207ENST00000553617 ABI2Q9NYB9 513 aaPredicted RBP5.95□□□□□ -1.46
TDP1-207ENST00000553617 TTLL8A6PVC2 850 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 WIPF1O43516 503 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 POLR3DP05423 398 aaPredicted RBP5.94□□□□□ -1.46
TDP1-207ENST00000553617 GJA8P48165 433 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 KCNQ4P56696 695 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 GRM2Q14416 872 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 DPH6Q7L8W6 267 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 NLRP8Q86W28 1048 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 SPATA32Q96LK8 384 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 CEP63Q96MT8 703 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 PUS7Q96PZ0 661 aaKnown RBP5.94□□□□□ -1.46
TDP1-207ENST00000553617 GGT7Q9UJ14 662 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 INPP5FQ9Y2H2 1132 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 DYRK1BQ9Y463 629 aa5.94□□□□□ -1.46
TDP1-207ENST00000553617 ATP2B1P20020 1258 aa5.93□□□□□ -1.46
TDP1-207ENST00000553617 KIAA0319Q5VV43 1072 aa5.93□□□□□ -1.46
TDP1-207ENST00000553617 C3orf58Q8NDZ4 430 aa5.93□□□□□ -1.46
TDP1-207ENST00000553617 ANKRD24Q8TF21 1146 aa5.93□□□□□ -1.46
TDP1-207ENST00000553617 DHX38Q92620 1227 aaKnown RBP5.93□□□□□ -1.46
TDP1-207ENST00000553617 PMEPA1Q969W9 287 aa5.93□□□□□ -1.46
TDP1-207ENST00000553617 ZCCHC2Q9C0B9 1178 aaKnown RBP5.93□□□□□ -1.46
TDP1-207ENST00000553617 RUBCNLQ9H714 662 aa5.93□□□□□ -1.46
TDP1-207ENST00000553617 BRD7Q9NPI1 651 aa5.93□□□□□ -1.46
TDP1-207ENST00000553617 ATP13A2Q9NQ11 1180 aa5.93□□□□□ -1.46
TDP1-207ENST00000553617 CADPSQ9ULU8 1353 aa5.93□□□□□ -1.46
TDP1-207ENST00000553617 A0A1W2PP55 124 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 FIGNL2A6NMB9 653 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 EFSO43281 561 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 SMARCA5O60264 1052 aaPredicted RBP5.92□□□□□ -1.46
TDP1-207ENST00000553617 GADD45BO75293 160 aaPredicted RBP5.92□□□□□ -1.46
TDP1-207ENST00000553617 F11P03951 625 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 FGRP09769 529 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 SNRPBP14678 240 aaKnown RBP5.92□□□□□ -1.46
TDP1-207ENST00000553617 GSTT1P30711 240 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 DNAJA1P31689 397 aaKnown RBP5.92□□□□□ -1.46
TDP1-207ENST00000553617 ARID5AQ03989 594 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 RBL2Q08999 1139 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 PEAR1Q5VY43 1037 aaPredicted RBP5.92□□□□□ -1.46
TDP1-207ENST00000553617 PRPF40BQ6NWY9 871 aaKnown RBP5.92□□□□□ -1.46
TDP1-207ENST00000553617 DNAJC2Q99543 621 aaKnown RBP5.92□□□□□ -1.46
TDP1-207ENST00000553617 NOC4LQ9BVI4 516 aaKnown RBP5.92□□□□□ -1.46
TDP1-207ENST00000553617 LNPKQ9C0E8 428 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 GPAMQ9HCL2 828 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 STK17AQ9UEE5 414 aa5.92□□□□□ -1.46
TDP1-207ENST00000553617 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.92□□□□□ -1.46
TDP1-207ENST00000553617 CYP2E1P05181 493 aaPredicted RBP5.91□□□□□ -1.46
TDP1-207ENST00000553617 THBS1P07996 1170 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms