RNA–Protein interactions for RNA: ENST00000553404.5

LIN52-201, Transcript of lin-52 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN52, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN52-201ENST00000553404 A0A087WZG4 1122 aa11.91□□□□□ -0.5
LIN52-201ENST00000553404 DZIP3Q86Y13 1208 aaKnown RBP11.91□□□□□ -0.5
LIN52-201ENST00000553404 TAOK2Q9UL54 1235 aa11.91□□□□□ -0.5
LIN52-201ENST00000553404 CD2BP2O95400 341 aaKnown RBP11.91□□□□□ -0.5
LIN52-201ENST00000553404 NUCB2P80303 420 aa11.91□□□□□ -0.5
LIN52-201ENST00000553404 HDAC1Q13547 482 aaPredicted RBP11.91□□□□□ -0.5
LIN52-201ENST00000553404 ZKSCAN2Q63HK3 967 aa11.91□□□□□ -0.5
LIN52-201ENST00000553404 DZIP1LQ8IYY4 767 aaKnown RBP11.91□□□□□ -0.5
LIN52-201ENST00000553404 KIAA1551Q9HCM1 1747 aa11.9□□□□□ -0.5
LIN52-201ENST00000553404 CAMTA2O94983 1202 aa11.9□□□□□ -0.5
LIN52-201ENST00000553404 EIF4A1P60842 406 aaKnown RBP11.9□□□□□ -0.5
LIN52-201ENST00000553404 ARHGAP27Q6ZUM4 889 aa11.9□□□□□ -0.5
LIN52-201ENST00000553404 GIGYF1O75420 1035 aaPredicted RBP11.89□□□□□ -0.51
LIN52-201ENST00000553404 ZNF526Q8TF50 670 aaPredicted RBP11.89□□□□□ -0.51
LIN52-201ENST00000553404 LMBRD1Q9NUN5 540 aa11.89□□□□□ -0.51
LIN52-201ENST00000553404 PIM2Q9P1W9 311 aa11.89□□□□□ -0.51
LIN52-201ENST00000553404 TSPYL4Q9UJ04 414 aa11.89□□□□□ -0.51
LIN52-201ENST00000553404 AFDNP55196 1824 aaKnown RBP11.89□□□□□ -0.51
LIN52-201ENST00000553404 CARMIL3Q8ND23 1372 aa11.88□□□□□ -0.51
LIN52-201ENST00000553404 KIF16BQ96L93 1317 aa11.88□□□□□ -0.51
LIN52-201ENST00000553404 ATP2B3Q16720 1220 aa11.88□□□□□ -0.51
LIN52-201ENST00000553404 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
LIN52-201ENST00000553404 TSC1Q92574 1164 aa11.88□□□□□ -0.51
LIN52-201ENST00000553404 KIF2CQ99661 725 aa11.88□□□□□ -0.51
LIN52-201ENST00000553404 TMEM51Q9NW97 253 aa11.88□□□□□ -0.51
LIN52-201ENST00000553404 PRPF40AO75400 957 aaKnown RBP11.88□□□□□ -0.51
LIN52-201ENST00000553404 LRSAM1Q6UWE0 723 aa11.88□□□□□ -0.51
LIN52-201ENST00000553404 JARID2Q92833 1246 aaPredicted RBP11.88□□□□□ -0.51
LIN52-201ENST00000553404 RUNDC1Q96C34 613 aa11.88□□□□□ -0.51
LIN52-201ENST00000553404 KIF3AQ9Y496 699 aa11.88□□□□□ -0.51
LIN52-201ENST00000553404 MYL6BP14649 208 aa11.87□□□□□ -0.51
LIN52-201ENST00000553404 DALRD3Q5D0E6 543 aaKnown RBP11.87□□□□□ -0.51
LIN52-201ENST00000553404 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.87□□□□□ -0.51
LIN52-201ENST00000553404 ITPRIPQ8IWB1 547 aa11.87□□□□□ -0.51
LIN52-201ENST00000553404 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
LIN52-201ENST00000553404 RNF216Q9NWF9 866 aaPredicted RBP11.87□□□□□ -0.51
LIN52-201ENST00000553404 RBM27Q9P2N5 1060 aaKnown RBP11.87□□□□□ -0.51
LIN52-201ENST00000553404 SYCE3A1L190 88 aa11.87□□□□□ -0.51
LIN52-201ENST00000553404 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
LIN52-201ENST00000553404 FAM177BA6PVY3 158 aa11.87□□□□□ -0.51
LIN52-201ENST00000553404 HLFQ16534 295 aa11.87□□□□□ -0.51
LIN52-201ENST00000553404 TRIM35Q9UPQ4 493 aa11.87□□□□□ -0.51
LIN52-201ENST00000553404 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.87□□□□□ -0.51
LIN52-201ENST00000553404 NPHP1O15259 732 aa11.86□□□□□ -0.51
LIN52-201ENST00000553404 EIF2S2P20042 333 aaKnown RBP11.86□□□□□ -0.51
LIN52-201ENST00000553404 GTF2F1P35269 517 aaKnown RBP eCLIP11.86□□□□□ -0.51
LIN52-201ENST00000553404 PRR5LQ6MZQ0 368 aa11.86□□□□□ -0.51
LIN52-201ENST00000553404 C2CD5Q86YS7 1000 aa11.86□□□□□ -0.51
LIN52-201ENST00000553404 WDR63Q8IWG1 891 aa11.86□□□□□ -0.51
LIN52-201ENST00000553404 RNF214Q8ND24 703 aa11.86□□□□□ -0.51
LIN52-201ENST00000553404 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
LIN52-201ENST00000553404 KRT24Q2M2I5 525 aa11.86□□□□□ -0.51
LIN52-201ENST00000553404 PDCL2Q8N4E4 241 aa11.86□□□□□ -0.51
LIN52-201ENST00000553404 NECTIN2Q92692 538 aa11.86□□□□□ -0.51
LIN52-201ENST00000553404 LNPKQ9C0E8 428 aa11.86□□□□□ -0.51
LIN52-201ENST00000553404 ANXA1P04083 346 aa11.85□□□□□ -0.51
LIN52-201ENST00000553404 TTLL7Q6ZT98 887 aa11.85□□□□□ -0.51
LIN52-201ENST00000553404 ZNF771Q7L3S4 317 aaPredicted RBP11.85□□□□□ -0.51
LIN52-201ENST00000553404 CGNQ9P2M7 1197 aaKnown RBP11.85□□□□□ -0.51
LIN52-201ENST00000553404 ATP10DQ9P241 1426 aa11.85□□□□□ -0.51
LIN52-201ENST00000553404 KDM3BQ7LBC6 1761 aa11.85□□□□□ -0.51
LIN52-201ENST00000553404 BRCA1P38398 1863 aaKnown RBP11.85□□□□□ -0.51
LIN52-201ENST00000553404 H0YIN7 160 aa11.85□□□□□ -0.51
LIN52-201ENST00000553404 NUCB1Q02818 461 aa11.85□□□□□ -0.51
LIN52-201ENST00000553404 BMP2KLQ5H9B9 411 aa11.85□□□□□ -0.51
LIN52-201ENST00000553404 ZNF622Q969S3 477 aaKnown RBP eCLIP11.85□□□□□ -0.51
LIN52-201ENST00000553404 ZNF219Q9P2Y4 722 aaPredicted RBP11.85□□□□□ -0.51
LIN52-201ENST00000553404 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
LIN52-201ENST00000553404 NOLC1Q14978 699 aaKnown RBP eCLIP11.84□□□□□ -0.51
LIN52-201ENST00000553404 CNBD1Q8NA66 436 aa11.84□□□□□ -0.51
LIN52-201ENST00000553404 GPT2Q8TD30 523 aa11.84□□□□□ -0.51
LIN52-201ENST00000553404 ZNF830Q96NB3 372 aaPredicted RBP11.84□□□□□ -0.51
LIN52-201ENST00000553404 NIP7Q9Y221 180 aaKnown RBP eCLIP11.84□□□□□ -0.51
LIN52-201ENST00000553404 NRXN2Q9P2S2 1712 aa11.84□□□□□ -0.51
LIN52-201ENST00000553404 CLEC4GQ6UXB4 293 aa11.83□□□□□ -0.51
LIN52-201ENST00000553404 CHD1LQ86WJ1 897 aa11.83□□□□□ -0.51
LIN52-201ENST00000553404 PIBF1Q8WXW3 757 aa11.83□□□□□ -0.51
LIN52-201ENST00000553404 SCN7AQ01118 1682 aa11.83□□□□□ -0.52
LIN52-201ENST00000553404 VGLL3A8MV65 326 aa11.83□□□□□ -0.52
LIN52-201ENST00000553404 NBPF5PQ86XG9 351 aaPredicted RBP11.83□□□□□ -0.52
LIN52-201ENST00000553404 BRIP1Q9BX63 1249 aa11.83□□□□□ -0.52
LIN52-201ENST00000553404 ZBTB3Q9H5J0 574 aa11.83□□□□□ -0.52
LIN52-201ENST00000553404 GPBP1L1Q9HC44 474 aaPredicted RBP11.83□□□□□ -0.52
LIN52-201ENST00000553404 SMC4Q9NTJ3 1288 aa11.83□□□□□ -0.52
LIN52-201ENST00000553404 CHL1O00533 1208 aa11.82□□□□□ -0.52
LIN52-201ENST00000553404 IGSF3O75054 1194 aa11.82□□□□□ -0.52
LIN52-201ENST00000553404 PROSER3Q2NL68 480 aa11.82□□□□□ -0.52
LIN52-201ENST00000553404 C9orf131Q5VYM1 1079 aa11.82□□□□□ -0.52
LIN52-201ENST00000553404 TTLL6Q8N841 843 aa11.82□□□□□ -0.52
LIN52-201ENST00000553404 CWC22Q9HCG8 908 aaKnown RBP11.82□□□□□ -0.52
LIN52-201ENST00000553404 TMEM63CQ9P1W3 806 aa11.82□□□□□ -0.52
LIN52-201ENST00000553404 ZNF652Q9Y2D9 606 aa11.82□□□□□ -0.52
LIN52-201ENST00000553404 RASSF7Q02833 373 aa11.82□□□□□ -0.52
LIN52-201ENST00000553404 CHAF1AQ13111 956 aaPredicted RBP11.82□□□□□ -0.52
LIN52-201ENST00000553404 TBC1D9Q6ZT07 1266 aa11.82□□□□□ -0.52
LIN52-201ENST00000553404 ADCY9O60503 1353 aa11.82□□□□□ -0.52
LIN52-201ENST00000553404 TRIM27P14373 513 aa11.81□□□□□ -0.52
LIN52-201ENST00000553404 GPTP24298 496 aa11.81□□□□□ -0.52
LIN52-201ENST00000553404 PDE6BP35913 854 aa11.81□□□□□ -0.52
LIN52-201ENST00000553404 C1QTNF8P60827 252 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms