RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 ATG3Q9NT62 314 aa10.92□□□□□ -0.66
LINC02407-202ENST00000553247 TMOD3Q9NYL9 352 aa10.92□□□□□ -0.66
LINC02407-202ENST00000553247 TFCP2L1Q9NZI6 479 aa10.92□□□□□ -0.66
LINC02407-202ENST00000553247 PALLDQ8WX93 1383 aa10.91□□□□□ -0.66
LINC02407-202ENST00000553247 PNPLA7Q6ZV29 1317 aa10.91□□□□□ -0.66
LINC02407-202ENST00000553247 ZNF530Q6P9A1 599 aaPredicted RBP10.91□□□□□ -0.66
LINC02407-202ENST00000553247 FLAD1Q8NFF5 587 aa10.91□□□□□ -0.66
LINC02407-202ENST00000553247 ASAP1Q9ULH1 1129 aa10.91□□□□□ -0.66
LINC02407-202ENST00000553247 LOC102724428A0A0B4J2F2 783 aa10.9□□□□□ -0.66
LINC02407-202ENST00000553247 SIK1P57059 783 aa10.9□□□□□ -0.66
LINC02407-202ENST00000553247 REPIN1Q9BWE0 567 aaKnown RBP10.9□□□□□ -0.66
LINC02407-202ENST00000553247 ITGB4P16144 1822 aa10.9□□□□□ -0.66
LINC02407-202ENST00000553247 MSTNO14793 375 aa10.89□□□□□ -0.67
LINC02407-202ENST00000553247 AKAP4Q5JQC9 854 aa10.89□□□□□ -0.67
LINC02407-202ENST00000553247 C1orf141Q5JVX7 400 aa10.89□□□□□ -0.67
LINC02407-202ENST00000553247 COL23A1Q86Y22 540 aaPredicted RBP10.89□□□□□ -0.67
LINC02407-202ENST00000553247 PPP1R1BQ9UD71 204 aaPredicted RBP10.89□□□□□ -0.67
LINC02407-202ENST00000553247 PPP2R1AP30153 589 aa10.88□□□□□ -0.67
LINC02407-202ENST00000553247 CABP4P57796 275 aa10.88□□□□□ -0.67
LINC02407-202ENST00000553247 NFATC2IPQ8NCF5 419 aa10.88□□□□□ -0.67
LINC02407-202ENST00000553247 ARXQ96QS3 562 aa10.88□□□□□ -0.67
LINC02407-202ENST00000553247 TOGARAM1Q9Y4F4 1720 aa10.88□□□□□ -0.67
LINC02407-202ENST00000553247 CEP350Q5VT06 3117 aa10.88□□□□□ -0.67
LINC02407-202ENST00000553247 QSER1Q2KHR3 1735 aa10.87□□□□□ -0.67
LINC02407-202ENST00000553247 KDM6AO15550 1401 aaPredicted RBP10.87□□□□□ -0.67
LINC02407-202ENST00000553247 HMOX1P09601 288 aa10.87□□□□□ -0.67
LINC02407-202ENST00000553247 MTHFSDQ2M296 383 aaKnown RBP10.87□□□□□ -0.67
LINC02407-202ENST00000553247 RC3H1Q5TC82 1133 aaKnown RBP10.87□□□□□ -0.67
LINC02407-202ENST00000553247 SYT17Q9BSW7 474 aa10.87□□□□□ -0.67
LINC02407-202ENST00000553247 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
LINC02407-202ENST00000553247 ATP6V1AP38606 617 aa10.86□□□□□ -0.67
LINC02407-202ENST00000553247 ITPK1Q13572 414 aa10.86□□□□□ -0.67
LINC02407-202ENST00000553247 PDIA6Q15084 440 aa10.86□□□□□ -0.67
LINC02407-202ENST00000553247 ZNF784Q8NCA9 323 aaPredicted RBP10.86□□□□□ -0.67
LINC02407-202ENST00000553247 LINC00116Q8NCU8 138 aa10.86□□□□□ -0.67
LINC02407-202ENST00000553247 CFAP53Q96M91 514 aa10.86□□□□□ -0.67
LINC02407-202ENST00000553247 SLC4A9Q96Q91 983 aa10.86□□□□□ -0.67
LINC02407-202ENST00000553247 LGR6Q9HBX8 967 aa10.86□□□□□ -0.67
LINC02407-202ENST00000553247 MAP3K5Q99683 1374 aa10.86□□□□□ -0.67
LINC02407-202ENST00000553247 SENP3-EIF4A1A0A087X0R7 540 aa10.85□□□□□ -0.67
LINC02407-202ENST00000553247 CAPN5O15484 640 aaPredicted RBP10.85□□□□□ -0.67
LINC02407-202ENST00000553247 RNMTO43148 476 aaKnown RBP10.85□□□□□ -0.67
LINC02407-202ENST00000553247 DNAJB2P25686 324 aa10.85□□□□□ -0.67
LINC02407-202ENST00000553247 SSFA2P28290 1259 aa10.85□□□□□ -0.67
LINC02407-202ENST00000553247 POLD1P28340 1107 aa10.85□□□□□ -0.67
LINC02407-202ENST00000553247 SLC52A2Q9HAB3 445 aa10.85□□□□□ -0.67
LINC02407-202ENST00000553247 NUDCQ9Y266 331 aa10.85□□□□□ -0.67
LINC02407-202ENST00000553247 COL24A1Q17RW2 1714 aa10.84□□□□□ -0.67
LINC02407-202ENST00000553247 CHD4Q14839 1912 aa10.84□□□□□ -0.67
LINC02407-202ENST00000553247 U2SURPO15042 1029 aaKnown RBP10.84□□□□□ -0.67
LINC02407-202ENST00000553247 FCHSD2O94868 740 aa10.84□□□□□ -0.67
LINC02407-202ENST00000553247 TRIM32Q13049 653 aa10.84□□□□□ -0.67
LINC02407-202ENST00000553247 AMIGO3Q86WK7 504 aa10.84□□□□□ -0.67
LINC02407-202ENST00000553247 AK7Q96M32 723 aa10.84□□□□□ -0.67
LINC02407-202ENST00000553247 ZFP42Q96MM3 310 aa10.84□□□□□ -0.67
LINC02407-202ENST00000553247 FHDC1Q9C0D6 1143 aaPredicted RBP10.84□□□□□ -0.67
LINC02407-202ENST00000553247 TAF1LQ8IZX4 1826 aa10.84□□□□□ -0.67
LINC02407-202ENST00000553247 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.83□□□□□ -0.68
LINC02407-202ENST00000553247 CNGB1Q14028 1251 aaPredicted RBP10.83□□□□□ -0.68
LINC02407-202ENST00000553247 GAS2L2Q8NHY3 880 aa10.83□□□□□ -0.68
LINC02407-202ENST00000553247 ZNF831Q5JPB2 1677 aa10.82□□□□□ -0.68
LINC02407-202ENST00000553247 RPS6KA4O75676 772 aa10.82□□□□□ -0.68
LINC02407-202ENST00000553247 PUS10Q3MIT2 529 aaKnown RBP10.82□□□□□ -0.68
LINC02407-202ENST00000553247 IL17REQ8NFR9 667 aa10.82□□□□□ -0.68
LINC02407-202ENST00000553247 PHACTR3Q96KR7 559 aa10.82□□□□□ -0.68
LINC02407-202ENST00000553247 RSPH6AQ9H0K4 717 aa10.82□□□□□ -0.68
LINC02407-202ENST00000553247 C5P01031 1676 aa10.82□□□□□ -0.68
LINC02407-202ENST00000553247 CNTNAP4Q9C0A0 1308 aa10.82□□□□□ -0.68
LINC02407-202ENST00000553247 C4BP0C0L5 1744 aa10.81□□□□□ -0.68
LINC02407-202ENST00000553247 GNAT3A8MTJ3 354 aa10.81□□□□□ -0.68
LINC02407-202ENST00000553247 RALBP1Q15311 655 aa10.81□□□□□ -0.68
LINC02407-202ENST00000553247 TRAPPC3LQ5T215 181 aa10.81□□□□□ -0.68
LINC02407-202ENST00000553247 VSIG10Q8N0Z9 540 aa10.81□□□□□ -0.68
LINC02407-202ENST00000553247 TMEM134Q9H6X4 195 aa10.81□□□□□ -0.68
LINC02407-202ENST00000553247 TUBGCP6Q96RT7 1819 aa10.8□□□□□ -0.68
LINC02407-202ENST00000553247 SPDYE16A6NNV3 312 aaPredicted RBP10.8□□□□□ -0.68
LINC02407-202ENST00000553247 GNPATO15228 680 aa10.8□□□□□ -0.68
LINC02407-202ENST00000553247 PTCD1O75127 700 aaKnown RBP10.8□□□□□ -0.68
LINC02407-202ENST00000553247 U2AF1L5P0DN76 240 aaPredicted RBP10.8□□□□□ -0.68
LINC02407-202ENST00000553247 PRKAR2BP31323 418 aa10.8□□□□□ -0.68
LINC02407-202ENST00000553247 U2AF1Q01081 240 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINC02407-202ENST00000553247 RTCBQ9Y3I0 505 aaKnown RBP10.8□□□□□ -0.68
LINC02407-202ENST00000553247 CD2APQ9Y5K6 639 aa10.8□□□□□ -0.68
LINC02407-202ENST00000553247 SCN11AQ9UI33 1791 aa10.8□□□□□ -0.68
LINC02407-202ENST00000553247 ADAMTS7Q9UKP4 1686 aa10.79□□□□□ -0.68
LINC02407-202ENST00000553247 GRXCR2A6NFK2 248 aa10.79□□□□□ -0.68
LINC02407-202ENST00000553247 HTATSF1O43719 755 aaKnown RBP10.79□□□□□ -0.68
LINC02407-202ENST00000553247 C1QTNF8P60827 252 aa10.79□□□□□ -0.68
LINC02407-202ENST00000553247 INTS5Q6P9B9 1019 aaKnown RBP10.79□□□□□ -0.68
LINC02407-202ENST00000553247 SMIM5Q71RC9 77 aa10.79□□□□□ -0.68
LINC02407-202ENST00000553247 NLGN1Q8N2Q7 840 aa10.79□□□□□ -0.68
LINC02407-202ENST00000553247 ARHGEF1Q92888 912 aaKnown RBP10.79□□□□□ -0.68
LINC02407-202ENST00000553247 SPOCK3Q9BQ16 436 aa10.79□□□□□ -0.68
LINC02407-202ENST00000553247 MRC1P22897 1456 aa10.79□□□□□ -0.68
LINC02407-202ENST00000553247 UBR3Q6ZT12 1888 aa10.78□□□□□ -0.68
LINC02407-202ENST00000553247 CEMIPQ8WUJ3 1361 aa10.78□□□□□ -0.68
LINC02407-202ENST00000553247 K7ELQ4 463 aaPredicted RBP10.78□□□□□ -0.68
LINC02407-202ENST00000553247 DDX10Q13206 875 aaKnown RBP10.78□□□□□ -0.68
LINC02407-202ENST00000553247 SLC39A6Q13433 755 aa10.78□□□□□ -0.68
LINC02407-202ENST00000553247 ALDH1A1P00352 501 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms